Oncorhynchus gorbuscha (pink salmon): 124015706
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Entry
124015706 CDS
T07892
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124015706
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124015706
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124015706
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124015706
NCBI-ProteinID:
XP_046187071
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All DBs
Position
LG26:34215990..34233740
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AA seq
638 aa
AA seq
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MRGGSSYGDRDRDRGRDRGSPRFGSSRGPPSNKKFGNPGERLRKKKWDLNELPKFEKNFY
NEHPDVQRMSQYDLEEFRRKKEITIRGSGCPKPVSSFSQAHFPQYVMDVLMQQNFKEPTA
IQAQGFPLALSGRDMVGIAQTGSGKTLSYLLPTIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAHEYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLKDYVQ
INVGALELSANHNILQIVDVCTESEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKTQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
NSSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVNTGR
GGGGRSRFRGNGSNASNPNLMYQDECNRRMRTTVGSKDSRGSSSGTGSSSSFSRDSRDGG
SSRAGDRSSSSYRDRRDSRSYGSSSSYSQYKSGSSNGGQDQSAGQFGSVSRSSKPPPPPS
GPQPLMAQKFTPAKPMMGLMGHSPFQFASPPPPTSQRK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcggttcatcgtatggagatcgagacagggaccgtggtcgcgacagggggagt
cctcgttttgggtctagcagaggtcccccttccaacaagaagtttgggaacccaggggag
cgtttgcgcaagaagaaatgggacctaaacgagcttccaaagtttgagaagaacttttac
aatgaacatccagatgttcagcgcatgagccagtatgacttggaggagtttcgcaggaag
aaggagatcactatcagggggtcaggctgcccgaagcctgtcagtagcttctcccaggcc
cattttccccagtatgtgatggatgtgctgatgcagcagaactttaaggagcccacagct
atccaggcacaaggcttccctctggccctgagtggcagggacatggtgggcatcgcacag
acaggttctgggaaaaccttatcgtatctcctgcctaccattgtgcacattaaccaccag
ccctacctagaaagaggagacggaccaatctgtttggttctggcaccaactcgagagctg
gcccagcaggttcagcaagtggcacatgaatacggcaagtcatcacgcatcaagagcacc
tgtgtctacgggggagctcccaagggaccccagatccgtgacctggagagaggtgttgag
atctgcatcgccaccccgggtcgtctcattgacttcctggaggcagggaagaccaaccta
cggcgctgcacctacttggtgctggacgaggctgacaggatgctggacatgggctttgag
cctcagatccgcaagattgttgaccagattaggcctgacagacagaccctgatgtggagt
gccacctggcccaaggacgtgcggcagctagcagaggacttcctgaaggactatgtccag
atcaacgtgggagccctggagctgagcgccaaccacaacatcctgcagattgtggatgtg
tgcacagagagtgagaaggacaacaagctgctccagctgatggaggagatcatggctgag
aaggagaacaagaccatcatctttgtggagaccaagaaacgctgcgatgatctgacccgc
agaatgagacgtgatgggtggccagcgatgtgtatccatggtgacaagactcagccagag
agagactgggtgctgacagagttccgtagtggcaaggctcctattcttattgctactgat
gtggcctcacgtggtttggatgtggaggatgtcaaatttgtcatcaattatgactaccca
aactcctctgaggactacatccaccgtatcggccgtacggcccgtagcaccaacaagggt
acagcctacacattcttcactccgggcaaccttcgtcaggcccgtgagctcatccgtgtt
ctagaggaggcccggcaggccataaaccccaagctgctgcaactggtcaacactggccgt
ggaggaggaggcaggtcacgtttccgtggcaacggctccaacgccagcaaccccaacctg
atgtatcaggatgagtgcaaccggcgcatgcgcactaccgtaggcagcaaggacagccgg
gggagcagtagcggcacggggagcagcagcagcttcagccgcgacagccgagatggaggg
agtagccgcgccggggacaggtcgtcctcttcctacagggataggagggacagccgcagc
tatggctccagctcctcctacagccagtacaagtctgggagcagcaatggggggcaagat
cagtcagcggggcagtttggttcagtcagcaggtccagtaagccccctccacccccctca
gggccgcagcccctcatggcccagaagtttaccccagccaagcccatgatgggattaatg
gggcactcgcccttccagtttgcttccccaccccctccaacctcacaaagaaagtaa
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