Oncorhynchus gorbuscha (pink salmon): 124015718
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Entry
124015718 CDS
T07892
Symbol
nup133
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124015718 (nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124015718 (nup133)
03036 Chromosome and associated proteins [BR:
ogo03036
]
124015718 (nup133)
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124015718 (nup133)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124015718 (nup133)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
CHASE3
Motif
Other DBs
NCBI-GeneID:
124015718
NCBI-ProteinID:
XP_046187092
LinkDB
All DBs
Position
LG26:10855229..10866919
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AA seq
1149 aa
AA seq
DB search
MFSPRSTPTMFSPRSTPSSSRRQSSRVTGRKSLAGTPTGLLFSPRRTSLAARSTPTRVQS
YSTSDALHFDVQTFGSSLPVKVMEALTMADADDQISVKVDESGWAWMVCGERLIIWKICQ
TAVAKLSVCKGLQLPTSEFAYYADLVSISSPSPLETASVQSISVMAVAPEGTARFWPSLA
HEGNYTETVVDMGENLCNFVVAVRGGSFIVSSYKGQMMRLGTDPSGKLLQRALQQGQGVL
SGIGRRVSSLFGMRAPLTNNNLHSVLWVGETGCLYTLTSCGLSKWEVDEVTEHQVLSWDS
SRALTESVADAIWGSESNYEEIKEGVNVTYMDMQLSQDGLVVLAAAWHPSDSPCLAYFCL
VTLLDNGNNISDELSVEVTKYNPPFQSEDALQAMRLMLPRASSPAAFLYNEELVFACSTG
TGRGGLPEEKIPFNTPGDRLRGGGCCANLPVFFSQNSGLVAVVARESASMLPETMEDSLC
FSLAGAGPEATAMETPTRMEPVAQEDKTKLLKAAFLQFCRNDLVGAQTMTDELFPPEGDG
DGEVGGELDLVVTRINLDLVDDYPASDPRWAESVPDESAGFPLTSLIILHQLEDKMKAHG
CFMDFLLQVGLLDRLGQTAVRSSPMATRLLLCEHAEKLQAAMMLKNHHAKHGELVNRAIL
IALRKSNATVSTSLTAADVFFREVSQISSVFECLLEEEERTLKENPVDSVKWAEVVLSVN
TIIKDMLQAAGQYRDTKASLYRASESTPAEPEYIPWTASSGLGGVRTVIARQHEVILRDV
YPHADSELRNGLNEQLAALLDVLLGGYVAQLTSLRPGRPGQQDRYNTLEMEYTQRRSELL
APLLELGQYQWVAALAEKYCDFDILVQMCEQTDNQNRLQHYMAKFADQNFADFLFRWYME
KGKRGKLLSQPIAQHQQLASFLQSHEHLSWLHHIHVHDFSSAYKTLYGQANMETRYFVKK
KTLLALSKLTALASDMPEAVMKKHVDEMVEQERFLLHQETLPKQLLEEKQQNPDTMPLLS
AHNLINLYICDDNRRANEYDFKKALDLLEYIDEEDAVDIEGLKCEIFCKALKKDDWLSAD
GNDDPLEAAKDSIFVKILLKLIQEGVPLQTYLPDVKDLLQLDEMEALKSKPTFEFVLRAN
YEHYLQAQI
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtttagccctcgttctacccctacgatgtttagccctcgttctacccctagttcaagc
cgaaggcagtcctcaagggtcaccggtagaaagagtctcgccggtacacctacagggctt
ctcttttccccacgtaggacgtcgttagcagcgagatcaactcccacgcgtgtccagagc
tactcaacttcagacgcactccacttcgatgtccagacgtttggctcttctctgcctgtc
aaagtcatggaggctttgacaatggctgatgctgatgaccaaatctctgtgaaggtggat
gagagtggctgggcctggatggtgtgtggcgagagactgatcatctggaagatctgccag
actgctgttgcaaagttgtcagtatgtaagggcctccagctgcccactagtgagtttgcc
tactatgctgatctcgtctccatatcatctcccagccctctggagactgccagtgttcag
tccatctctgtcatggcggtggctccagagggaacagcccggttctggcccagtttggcc
cacgaggggaattacactgagactgtggttgacatgggcgaaaacctctgcaactttgtt
gtggctgttagggggggtagtttcatcgtgtcatcctacaagggccagatgatgcgcctc
gggacggacccctccgggaagctgctgcagagggcgctacagcagggccagggggtgctc
tccggcatcggacgccgcgtctccagcctgtttggcatgcgcgccccgctcaccaacaac
aatctccacagtgttctgtgggtgggtgagacgggctgcctgtatactctgacctcctgt
ggactcagtaaatgggaggtggatgaggtcacagagcaccaggtcctcagctgggactcc
agccgcgctctgacggagagtgtcgccgacgccatctgggggtcagagagcaactatgag
gaaatcaaggaaggagtgaacgttacctacatggacatgcaactgagccaggatggcctg
gtagtgttggcggcagcctggcacccctcagactccccctgcctggcctacttctgcctg
gtcaccctgctggacaacggcaacaacatttctgatgagctctctgtggaggtcaccaag
tacaacccccccttccagagtgaggatgctctacaggccatgaggctgatgttaccacgg
gcctccagccctgctgccttcctgtacaacgaggagctggtgtttgcctgctccaccggt
accggcagaggaggtctacctgaggagaagatccccttcaacacacctggtgaccgtctg
cgtggtgggggctgctgtgccaacctgccggtgttcttctcccagaacagtggtctggtg
gccgtggtggccagagagagtgcctccatgctgcctgagaccatggaggactccctctgc
ttctccctggctggggccggccctgaggcaactgctatggagactccgactaggatggag
cctgtagcgcaagaggacaaaaccaaactcctaaaagcagcgtttctgcagttctgccgg
aatgacctggtgggggcccagaccatgacagacgagctgttccccccggagggggacgga
gacggggaggtgggcggggagctggacctggtggtgacccggatcaacctggacctggtg
gatgactacccagcctcagacccccgctgggccgagtctgtccctgacgagagtgctggc
ttccccctgacctccctcatcatcctccaccagctagaggacaagatgaaggcccacggc
tgcttcatggacttcctgctacaggtgggtctcctggaccggctgggccagaccgcggtg
cgctcgtctcccatggcgacgcgcctgttgctgtgcgagcacgccgagaagctacaggcg
gccatgatgctgaagaatcaccacgccaagcacggcgagctggtcaatcgtgccatcctc
attgccttgaggaagagcaacgcaaccgtgtccaccagcctcacggccgcagacgtcttc
ttcagagaggtgtctcagatctcctcagtctttgagtgtctactagaagaggaggagagg
actttgaaggagaaccctgtggactctgtgaagtgggctgaagtggtgctcagtgtcaac
actatcatcaaggacatgctgcaggctgctggtcagtacagagacaccaaggcctcactg
tacagagcctcagagagcacccctgccgagccagaatacatcccatggaccgcctctagc
ggtctgggaggggttcgcaccgtcatcgcccgccagcacgaggtgatcctgcgtgacgtg
taccctcacgccgactcggagctgcgcaatggcctgaacgagcagctggcagcgctgctg
gacgtgctcctgggaggctacgttgcccagctgacctcactgagaccaggccgcccgggc
cagcaggaccgctacaacaccctggagatggagtacacgcagcgccgctctgaactgcta
gcaccactgttggaactgggtcagtaccagtgggtggcggcactggcagagaagtactgt
gactttgacatcctggtccagatgtgtgagcagactgacaaccaaaacagactgcagcac
tacatggccaagttcgccgaccagaactttgcggacttcctgttccgctggtacatggag
aagggaaagaggggcaagctgctctcccagcccattgcccagcaccagcagctggccagc
ttcctgcagtcccacgaacacctcagctggcttcaccacatccacgtccatgacttcagc
agtgcttacaaaaccctgtatggccaggccaacatggagacacgttactttgtgaagaag
aagaccctgttggctctcagtaaactgactgccctggcatcagacatgcctgaggctgtg
atgaagaaacatgtagatgaaatggtcgagcaggagcggttcctgctgcaccaggagact
ctgcccaaacagctgctggaggagaaacaacagaaccccgacaccatgcccctgctcagc
gctcacaaccttattaatctgtatatttgtgatgacaaccgacgagccaatgagtatgac
ttcaagaaggctctggatctactggagtacatagacgaggaggacgctgtggacattgag
ggactcaagtgtgagatcttctgcaaggccctcaagaaagacgactggttgtctgctgat
gggaacgatgaccctctggaggcagccaaggacagcatctttgtcaagatcctcctcaag
ctgatacaagaaggtgttcctctacagacctaccttcctgacgtcaaagaccttcttcag
ctggacgagatggaggctttgaaatcaaagcccactttcgagtttgtactgcgggccaac
tatgaacattacctgcaagcacagatctga
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integrated database retrieval system
