Oncorhynchus gorbuscha (pink salmon): 124015766
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Entry
124015766 CDS
T07892
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
124015766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124015766
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124015766
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124015766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-B_box
zf-C3HC4
zf-C3HC4_4
zf-RING_5
ANCHR-like_BBOX
U-box
CC_BshC
Motif
Other DBs
NCBI-GeneID:
124015766
NCBI-ProteinID:
XP_046187180
LinkDB
All DBs
Position
LG26:13434231..13448804
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AA seq
675 aa
AA seq
DB search
MAEDMFSLMSLEDELSCSICLCAFDCPVTIPCGHNFCQECLLETWKDNYSCPQCRTHFTT
KPELKKNTVLSTVVETFKMKSKKSDLPSEVGDLIMWDAVKMVSKEVAILCDTCMEAKAFK
TCLTCMASFCLEHVRPHHENPVFGAHQLNEPLGDLRDRICTDHHKLMEFYCVQHGRCICG
VCLQQVHKGCTFSSPDEQRALQESDLRGKLSLLDGKIDKNQTVISQMNDQQSKLKDSAAS
RKRALEDEYRQIRELLDRDEREALNTVDREQESAQTKLQNLIKKFNQNIAKLSVAKDGVD
SLLSQTQTVAFLQASVDMPAAVAFDPHTPKVNLDSRALAAWHAYSAGLREHLTHVLKQPV
EARLQILKPAERFAPPLLPNFYEMGGMPPQGHPRMPRSHSPGAPLRANQRKKHPQDSNRE
RKSDKKRDHKEGKEHKADKNPQKPPNAPREFATPVPHTPRDHPRGQSAEPRPRNREDPGQ
PSVLPSITSAAKRNDLLQYGTVLTFDLKTAHKRICLTENMTVASVSDEPTPYPDGPARFS
ICSQVITSKGFSRGRHYWEVKMSSNNFTGIGLAYNSIDRKGPASRLGRNAQSWCVEWFNV
KLSAWHASSETVLQNPNPTRVGVLLDCEEGTATFYNVQDRAYPFHTFVFQFAEAVYPAFW
LFSSGSSVSLCKLQS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggatatgttttccctcatgagtctcgaagacgaactgagctgtagcatctgc
ctctgtgctttcgactgtccggtgacaattccatgtggacacaacttttgccaagagtgt
ctcctagaaacatggaaagacaactacagctgtccacaatgccggacccacttcaccacc
aaaccagagctgaagaagaacaccgttctcagcactgttgtggaaacgttcaaaatgaag
tcgaaaaaaagcgacctccccagtgaggtgggcgacttaatcatgtgggatgcggtcaag
atggtgtccaaagaggtggctatcttgtgcgacacctgtatggaagccaaagcattcaag
acctgcctcacctgtatggcgtcgttctgccttgagcacgtgaggcctcatcatgagaac
ccagtgtttggcgcgcatcagctgaacgagcctctgggcgacctgcgcgaccgtatctgc
accgaccaccacaagctgatggagttctactgtgtccaacatggccgctgtatctgtggt
gtctgtctgcagcaggtgcataaaggctgtaccttctccagccctgatgaacaacgggca
ctgcaagagtctgatttgaggggcaagttgagtctgctggatggaaagattgacaagaac
cagactgtcatctctcagatgaatgaccagcagagcaagttgaaggactctgcagccagc
aggaagagagctctggaggacgagtaccgccaaatccgggagctgctggaccgtgacgag
cgtgaggctctgaacaccgtggaccgcgagcaggagagcgctcagaccaaactccagaac
ctcataaagaagttcaaccagaacattgcgaagcttagtgtggcaaaagatggcgtcgac
agcctgctcagtcagactcagactgtggctttcctacaggcctcagttgacatgccggca
gcggtggcctttgacccccataccccgaaggtcaacctggactctagggccttggcagcc
tggcatgcctactctgcaggcctgagggagcatctcacacatgtactgaaacagcctgta
gaggccagactgcagatactcaaaccagctgagaggtttgctcctcctctgctgccaaac
ttctatgaaatgggaggcatgccaccacaaggtcacccgagaatgcctcgatcccacagc
ccaggagctcccctcagggcaaaccagaggaagaagcatccacaagattcaaaccgagag
agaaagtcagacaagaaacgagatcacaaggaagggaaagaacataaggctgacaaaaat
ccccaaaagccacctaatgctcccagagagttcgccactcctgttccacacacaccaagg
gaccaccccagaggacaatccgcagaacccagacccaggaacagggaggacccaggacaa
ccaagtgttctcccaagtatcacgtctgcagcaaaacgaaatgaccttctgcaatatggc
acggttctcacctttgacctcaaaacagcccacaagcgcatctgcctcacagagaacatg
accgtggcctctgtgtcagacgagcccaccccttaccccgatggccccgcccgtttctcc
atctgcagccaggtgatcacttccaagggcttctcccgcggccgccactactgggaggtc
aagatgagcagcaacaacttcaccggcatcggcctggcctacaacagcatcgaccggaag
ggtccggctagccggctggggcgtaacgcccagtcctggtgcgtggagtggttcaacgtc
aagctgtcggcctggcacgccagcagtgagactgtactgcagaacccgaatccgacccgc
gtcggcgtgctgctggattgcgaggagggaacggccactttctataacgtacaggaccgg
gcatacccgttccatacgtttgtgttccagttcgccgaggcagtgtacccggcgttctgg
ctcttctccagcggctcgtctgttagcctgtgcaagctgcagtcttga
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integrated database retrieval system
