Oncorhynchus gorbuscha (pink salmon): 124016002
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Entry
124016002 CDS
T07892
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124016002
04121 Ubiquitin system [BR:
ogo04121
]
124016002
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
124016002
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
124016002
BRITE hierarchy
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GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
DBD_Tnp_Hermes
DUF5371
Motif
Other DBs
NCBI-GeneID:
124016002
NCBI-ProteinID:
XP_046187474
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All DBs
Position
LG26:33187152..33192339
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AA seq
635 aa
AA seq
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MTEFKRAFSLVWDHFTLVTPNKVQCALCSQRLSFNKNTSAMLRHLRSRHPSEAWYSNSTS
GAHSSTSNSTSGVHSTFSGTTGLNSMFTNSAAAGHHIQVRTTRQEDLDDALVNMLVKDTQ
PFSVVEEEGFTAFVQKLDPSYNLPNKQALKKMVGSRCEFINDNVVSQMVISDFVSLTSDM
WTSIDKYSYISVTGHLVTENAQLSTFLLGISKLPENHKVIHIEEAKNQLVASWGLHSRVA
AFVTENSENMVATVQKLGILQLPSFAHVLNLVIKRSMEATLELQDIRSQARAIVSFFKSN
QNAEMRLAEVQGQLGRPEQKLIQEVDSRWNSSFSMLERIFDQRESVAAALSTLDTDIIPL
GSADYEVIHQCLGVLGSFNQATAELASEKRVSASKVIPLVRMLKITLEKKHGAIIHSTAT
QLASNLQRELQTSCSMVETEPILALSALLDPRFKMLAFGNQGYAQEAVKLLTSECASLIR
INPDKDDILPPSTTMSTTPSLTSPHTSSWAMETASISMATSLSKSHDGGLWEMFDSKVGE
TQSVQSSTADAAVEVQHYLSDPYLNRVENPMHYWEKHSKVYLHLFQLARKYLSVPASSVP
CERIFTKAGDVFNKKRSCLSMKAVEQIMLLNKGLV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatttaagagagccttctcactggtgtgggatcacttcactctagtgacaccc
aataaggtccagtgcgccctctgttcacaacggcttagcttcaacaaaaacacctccgcc
atgttaaggcacctacgatcaaggcacccaagcgaggcttggtacagcaactcaacatct
ggggcccactcaagcacaagcaactcaacatctggagtccactcaacgttctctggtact
acaggactaaactcaatgtttacaaacagtgctgctgctggacaccacatccaagtcagg
accaccagacaagaggacctggatgatgccctagtcaacatgttggttaaagacacccag
ccattttcagtagtcgaggaagaaggattcactgctttcgttcaaaagctagacccaagc
tacaatcttccaaacaagcaagcactgaagaaaatggtggggtctcggtgtgaattcatc
aatgataatgttgtatctcagatggtaatttctgactttgtcagcctgacttcggacatg
tggacatctatagacaagtacagttacatttcagtgacggggcatttggtaacagaaaat
gcccagttatccactttcctccttgggatttctaagctgcctgaaaaccacaaagtgatc
cacattgaggaggccaaaaaccaactggtggcgagctggggcctccacagcagggtcgct
gcatttgtcacagagaacagcgaaaatatggtagccacggttcagaaattaggaatcctc
cagttgccctcttttgcacacgtcctgaaccttgtgattaagaggtccatggaggctact
ttggagctgcaggacatccgctcccaagcgcgggctatcgtgtctttcttcaagtcgaat
cagaacgcagagatgaggttagccgaggtgcaggggcagctaggcaggccggagcagaag
ctgatccaggaagtggactcgagatggaacagtagcttttctatgctggaacgcatcttt
gatcagagggagtctgtggctgctgctctcagcaccctggacacggacatcatccctctg
ggatctgctgactacgaggtcatccaccagtgtctcggagtgctgggttccttcaaccag
gccacagctgagctcgcctcagagaaacgcgtctctgcttccaaggtcattcctcttgtc
cgaatgctgaagataacccttgagaagaagcacggtgccatcatacactctacagctaca
cagctggcgtctaacctgcagagggagcttcagacgagctgcagtatggtggagaccgag
ccaatcctggctctctcggctctcctagacccgcgcttcaaaatgttggccttcgggaac
caaggctacgctcaggaggcggtgaagctcctcacctccgagtgcgcctcattaatccgg
ataaatcccgacaaggatgacattctaccaccctccaccaccatgtcaacgacgccctcc
ctgacatcaccccacacctcctcctgggcaatggaaaccgcttccatctccatggcaaca
tctctgtctaagtcccacgatgggggtctgtgggagatgtttgacagtaaagtgggtgag
acacagagcgtccagagcagcacggcggacgcagcggtggaggtacaacactacctcagt
gacccgtacctgaaccgagtggagaaccccatgcactactgggagaagcactccaaggtg
tacctgcacctgttccagctggctcggaaatacctcagcgttcccgcctcgtctgtgcca
tgcgagcgcatattcaccaaagctggagatgtgttcaataaaaagaggagttgcctcagt
atgaaggctgtagagcagataatgctgttgaataaaggtctcgtatag
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