Oncorhynchus gorbuscha (pink salmon): 124016133
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Entry
124016133 CDS
T07892
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124016133
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124016133
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124016133
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124016133
NCBI-ProteinID:
XP_046187619
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All DBs
Position
LG26:4233191..4245683
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AA seq
657 aa
AA seq
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MRGSSSYGDRDRDRGRDRGARFGSSSWGGSPPMKKFGNPGERLRKKKWDLDELPKFEKNF
YNEHPELQRMTQYDIDEFRRRKEITVSGTGCPRAMTSFHHAQFPQYVMDVLLSQDFKEPT
SIQSQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRE
LAQQVQQVAHDYGKTSRIKSTCVYGGAPKGPQIRDLERGTEICIATPGRLIDFLEAGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLRDYV
EINVGALELSANHNILQIVDVCMENEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDELT
RRMRRDGWPAMCIHGDKSQPERDWVLTEFRSSKAPILIATDVASRGLDVDDIKFVINYDY
PNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVNSG
HGGGGGGRMRYRGGGSSANNPNMMFQDVCERRLRSVSGGNKPDSRGSSFSRDGRSGGGRD
RDTRSSSSSSNRDRSRVSRGSYGSGGGDQYQSYGGGTQYSSRAGGAANGAPRDSSGRGQN
QSSQPQGVFGPAPPPAAGPKPLMAQLMAPPHPPLMSFIGQPPYPFAPPPPPTPPPRK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgagggggagttcgtcgtacggagaccgagatagagaccgtggacgagacagaggggct
cggtttgggtccagtagctggggcggctctccccctatgaagaagtttgggaaccctgga
gaacgccttcgcaagaagaagtgggatctggacgagctgcccaagtttgagaagaacttc
tacaacgagcacccagagctccagcgcatgactcagtatgacatagatgagttccgcagg
aggaaggagatcacagtcagcggtactggctgccccagggccatgaccagcttccaccat
gcacagtttccccagtatgtaatggatgtgctactgagtcaggacttcaaggagcccaca
tccatccagtcacagggcttccctctggccctgagtggcagggacatggtgggcatcgct
cagactggctccggcaagaccctggcatatctgcttcctgccattgtgcacatcaaccat
cagccctatctagagaggggagacggacctatttgcctggtcctggccccgaccagagag
ttggcccagcaggtgcagcaggtggctcatgattatggaaagacctcccgcatcaagagt
acctgtgtctatggaggagcacccaagggaccgcagatacgtgacctggagagaggtaca
gagatctgcatcgccaccccggggcgtctcatagacttcctggaggcagggaagaccaac
ctgcggcgctgcacctacctggtgctggacgaggctgaccgcatgctggacatgggcttc
gaaccacagatacgcaagatcgtggaccagatccggccggaccgccagactctgatgtgg
agtgccacctggcccaaggacgtgcgtcagctggcagaggacttcctgcgggattatgtc
gagatcaacgtaggagctctggagctcagcgccaaccacaacatcctgcagatagtggac
gtctgcatggagaacgagaaggacaacaagctgctccagctgatggaagagatcatggct
gagaaggagaacaagaccatcatctttgtggagacaaagaagcgctgcgacgagctcacc
cgcaggatgagaagagatgggtggccagccatgtgtatccatggggacaagagccagcca
gagagagactgggttctgacagaattccgtagcagcaaagctcctatcctcatcgccact
gacgtggcgtctcgcggtctggacgtggacgatatcaagtttgtcatcaactatgactac
cccaactcgtctgaggactacgtgcacaggatcggccgtacagcccgcagcaccaacaag
ggcacggcctacaccttcttcaccccgggtaacctgcgccaggccagggacctggtccga
gtcctggaggaggcccggcaggccatcaatcccaaactgctgcagttggttaactctgga
catgggggaggaggtggtggcaggatgcgttaccgtggcggcggttccagcgccaacaac
cccaacatgatgttccaggacgtgtgtgagcgtcgcttgcgctccgtcagcgggggcaac
aagccagacagccgcggcagcagctttagccgggatgggcgcagtggcgggggtcgggac
agagacactaggtcctcatcctcttcctccaacagggaccgaagcagggtcagccggggg
agttacggctccggggggggcgaccaataccagagctatggtggtggtacccagtacagc
tccagggctgggggggctgctaatggggcccctagggatagtagtggtaggggccagaat
cagtccagtcagccccagggtgtgttcggtccagctcctccacctgcagcaggtcccaag
cccctcatggcccagctgatggccccaccacatccccctctcatgagcttcatagggcag
cctccgtacccctttgctcctcccccgccgcctacaccaccacccaggaagtag
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