KEGG   Oncorhynchus gorbuscha (pink salmon): 124016348
Entry
124016348         CDS       T07892                                 
Name
(RefSeq) ras-related protein Rab-5C-like
  KO
K07889  Ras-related protein Rab-5C
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137  Mitophagy - animal
ogo04144  Endocytosis
ogo04145  Phagosome
ogo04148  Efferocytosis
ogo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124016348
   04145 Phagosome
    124016348
   04137 Mitophagy - animal
    124016348
   04148 Efferocytosis
    124016348
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124016348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124016348
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124016348
   04031 GTP-binding proteins [BR:ogo04031]
    124016348
Membrane trafficking [BR:ogo04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    124016348
 Endosome - Lysosome transport
    124016348
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124016348
  Exosomal proteins of other body fluids (saliva and urine)
   124016348
  Exosomal proteins of colorectal cancer cells
   124016348
  Exosomal proteins of bladder cancer cells
   124016348
GTP-binding proteins [BR:ogo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    124016348
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 124016348
NCBI-ProteinID: XP_046187858
LinkDB
Position
LG26:complement(27869633..27886669)
AA seq 219 aa
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGAGGRAGGRAGVDLQEAAPQAGGSKCCGGN
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcggccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaagtccagcttggtgctgcgc
ttcgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagactgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaggctgccatcgtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccctaatatcgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatatttatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccggaggccgggccggtggtcgggcagga
gtggacctgcaggaagccgccccacaggctggtggaagcaagtgctgtggtgggaactaa

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