Oncorhynchus gorbuscha (pink salmon): 124016348
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Entry
124016348 CDS
T07892
Name
(RefSeq) ras-related protein Rab-5C-like
KO
K07889
Ras-related protein Rab-5C
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137
Mitophagy - animal
ogo04144
Endocytosis
ogo04145
Phagosome
ogo04148
Efferocytosis
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124016348
04145 Phagosome
124016348
04137 Mitophagy - animal
124016348
04148 Efferocytosis
124016348
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124016348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124016348
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124016348
04031 GTP-binding proteins [BR:
ogo04031
]
124016348
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
124016348
Endosome - Lysosome transport
124016348
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124016348
Exosomal proteins of other body fluids (saliva and urine)
124016348
Exosomal proteins of colorectal cancer cells
124016348
Exosomal proteins of bladder cancer cells
124016348
GTP-binding proteins [BR:
ogo04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
124016348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
124016348
NCBI-ProteinID:
XP_046187858
LinkDB
All DBs
Position
LG26:complement(27869633..27886669)
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AA seq
219 aa
AA seq
DB search
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGAGGRAGGRAGVDLQEAAPQAGGSKCCGGN
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcggccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaagtccagcttggtgctgcgc
ttcgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagactgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaggctgccatcgtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccctaatatcgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatatttatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccggaggccgggccggtggtcgggcagga
gtggacctgcaggaagccgccccacaggctggtggaagcaagtgctgtggtgggaactaa
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