Oncorhynchus gorbuscha (pink salmon): 124017055
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Entry
124017055 CDS
T07892
Name
(RefSeq) DNA repair and recombination protein RAD54B-like isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124017055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124017055
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
124017055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
124017055
NCBI-ProteinID:
XP_046188382
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MRRSGAPSQVFGNMAKKPRFVPPGASLAGPPDSPVGTPLELEPLAPKLAPGNVLYKVQRS
LSAPAPPLALPVKAFSLTKSSPQAPGLSRALARVLGAADSKKNELEPEDLSFTEENTGDP
ADFRCSSQSPAGGCGPVGVGAGSGSSAGSDGPRYFSVMWCKASGRKHKRWQGDAVLVTRG
RTATLKDMEGKDIGKGSGYKVSELASLGEGETLMIGAKQVEVMGLISELDYNKGRGFLDV
HVEKEEPKISAPPPSRRPASKPFCRPTLLGGETDRGVAKPQEEGPCKPRHDPLAPGAIVM
PRPSTNHQWAYNKAGLPLVDVVVDPYLTAHLRPHQRDGLLFLYECVMGMRATCRYGAILA
DEMGLGKTLQSVALTWTLLKQGPYGGKPVAKLVLVVAPGSLVQNWGAEFKKWLGRERINV
YTVNQDHRVELFAASPLHSVLVISYEMLLRSLEVVQKLEFGLVICDEGHRLKNSSIKTSS
ALSGLSCTRRVILTGTPVQNDLQEFYSIIEFVNPGILGSSAAYRKVYEEPILRSRQPICT
EEERDLGEERAAELSRLTGLFILRRTQEIINRYLPPRLDWTVFCSPSPLQRELYQALLSH
RVIRACLQGLTQTHTHLACITALKKLCNHPGLLYSTVQERSDGSSAEGSLYEGLRGVFPE
SYSSGGFSTADSGKLLVLSDLLTTIHHLSPTDRVVLVSNYTQTLDLIQDLCVHLGYTYCR
LDGNTPTIQRQRLVDNFNSPHSAHFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQ
AMSRVWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSSNEL
RDLFSLTDTPCLTHDLLHCSCSMDGSAPEGGEDAASDRPCQLGRQGDRGGAGQKHLSMSE
LMQWRHFAGDTHTFRDAYLDHARTHISFAFQSTISHTTQ
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgctcaggggcccccagccaggtctttggtaacatggcgaagaagccccggttc
gtccctcctggagcctccctggctggtcctcctgattcccctgtgggtactccgcttgaa
ctggagcctctggcccctaaactcgccccggggaacgtgctctacaaggtccagaggagc
ctctcagcccctgcaccgccccttgccctgcctgtgaaggccttcagcctgactaagagc
agcccccaagccccaggcctgtccagagctctagccagggtgctaggtgcagcagacagt
aagaagaatgagctagagcctgaagacctttcctttacagaggagaacactggagaccca
gctgatttcagatgttcctcacagagtccggcaggaggctgtggtccagttggggtcggg
gcagggtctggtagcagtgctggttctgacgggccgcggtacttcagtgtgatgtggtgt
aaggccagtgggaggaaacacaaacgctggcagggagacgctgtcctggtgacacgaggg
cgcaccgccacgcttaaagacatggagggcaaggacatcggcaagggtagtggctataag
gtatcagagctggcatcgctgggtgaaggagagaccttgatgataggagctaaacaggtg
gaggtgatgggactcatatcagagctggactacaataagggccgcggtttccttgacgtc
catgtggagaaggaggagcctaagatatcagctcctcccccctcacgacgcccagcttcc
aaaccgttctgccgtccgacgctattgggcggagagactgataggggagtggccaagcct
caggaggaggggccctgtaaaccacgccatgaccctctagcaccaggagccattgttatg
ccccggccctcaaccaatcaccagtgggcgtataacaaggcaggcctcccactggtggac
gtggtggttgacccctacttgaccgctcacctccgaccccaccagcgagacggcctgctg
ttcctctacgagtgtgtcatggggatgagggctacatgtaggtacggtgctatcctggca
gatgagatgggtctgggtaagaccctccagagcgtggctttgacatggacgctgctaaag
cagggcccatacggcgggaagccggttgctaagcttgtgctggtggttgcccctggcagc
ctggtgcagaactggggggcggagtttaagaagtggcttggccgtgagaggatcaacgtc
tacactgttaaccaggaccacagggtggagctgtttgcagcgtctcctctccacagtgta
ttagtgatcagctatgagatgctgcttcgctctctggaagtggtacagaagctggagttt
gggctggtgatctgtgatgagggtcacaggttgaagaacagcagcatcaagacttcctct
gccctcagcggtctcagctgtacacgcagagttattctgacaggtactcctgtccagaat
gacctgcaggagttctattccatcatagagtttgtgaacccgggaattctggggtcgtct
gctgcctacaggaaggtgtacgaggagccaatcctccgctcccgacagcccatctgcact
gaggaggagagagatttgggggaggagcgagcggctgagctctctcgtctgactggtctg
tttattctgaggcggacccaagagatcatcaaccgctacttgccacctcgtcttgattgg
acagtgttctgtagcccctcccccttgcagcgggagctgtaccaggctctcctctcgcac
cgtgtcatccgagcctgtctacaggggttgacacagactcacacacatctcgcctgcatc
accgccctgaaaaagctctgcaaccacccaggactgctctactccactgtacaggagcgt
tctgatggcagctcagcagagggttctctgtatgaagggctaagaggtgtctttccagag
tcttactcttctgggggcttcagtacagctgactcggggaaactactggtcctgtctgac
ctactgaccactattcaccacctcagccctactgacagggtggtgttggtgtccaactac
actcagacgttagacctgatccaggacctgtgtgtccacctgggctacacctactgtcgc
ctggacggcaacacccccaccatccagaggcagcgattggtggacaacttcaacagccct
cactccgcccacttcctcttcctcctgagttctaaagccggaggggtggggcttaacctg
atcggggcctcccacctggtcctatacgacatcgactggaaccctgccaacgatatacag
gcaatgtcacgagtgtggagagacggacagaagaagactgttcacatctaccgcctgctc
actgcaggtaccatagaggagcgtatcttccagaggcaggtgtccaaacaggggctttct
gggacagtggtggacttggggaaaggggcggagcacaccagcttctcctccaatgagctg
cgagatctcttcagcctgacggacacaccctgtctcactcacgacctgctacactgcagc
tgcagtatggacggatcagccccggaaggaggagaggatgctgcgtctgataggccgtgc
cagctgggtcgtcaaggtgaccgtggtggggcggggcagaagcatctgagcatgtcagaa
ctgatgcagtggagacacttcgcaggggacacacacaccttcagagatgcttacctggac
catgcacgaacccacatctccttcgccttccagtccaccatctcacacaccactcagtaa
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