Oncorhynchus gorbuscha (pink salmon): 124017062
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Entry
124017062 CDS
T07892
Name
(RefSeq) nuclear receptor ROR-alpha B-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124017062
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ogo03310
]
124017062
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124017062
Nuclear receptors [BR:
ogo03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
124017062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TPR_IFT122
Motif
Other DBs
NCBI-GeneID:
124017062
NCBI-ProteinID:
XP_046188395
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MEYEEPESPEHITTEEPIKRGDTVSKKTHLRDTVSKKTHLTQIEVIPCKICGDKSSGVHY
GVITCEGCKGFYRRSQLPSVSYSCSRQSNCPIDRASRNRCQSCRLQKCVTQGMSRDAVKF
GRMSKRQRESLNAEVERHRQQQQQQHLQAEAQLALPYPSKACRFRTPHLLQAPAPAYSFP
GEPELPPCPTDVLPYLVCSPGESQAPGLAYQGSCVSPGSGHSDERGFDSRQPSPDQTTGM
GIRSYDPEDPYCPYPPSHSLLHIEELCDSIVRSHRDTSQFRLEELQALRWKLFSREEIHA
YQSKSVDEMWQHCAVRLTEAVQYVVEFAKSIPGFRGLGQNDQITLLKTGSMEVVLVRMSR
CFNTENSTVFFDGKFGSTELFKSLGCGDLMVAVFDFAHRMCALRLTEQQMALFSSLVLIN
PDRPCLEDRGRVHRMRRDLEECLSHMLRRDNQESLQHKLYQKVSVLRSLCSLHVEKLHWF
SQRYPLTVHSVFPPLYKELFTSDLPSVDSL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgaggagcccgaatcacccgaacacatcactacagaagaaccaatcaaaaga
ggagacactgtgtccaagaagactcatttgagagacactgtgtccaagaagactcatttg
actcagattgaggtgattccctgtaagatctgtggtgataaatcatcaggagttcactat
ggagtcatcacctgcgagggctgcaagggtttttaccggcgtagccagctgccgtccgtg
tcctactcctgttccagacagagtaactgtcctatagacagagccagccgcaaccgctgc
caaagctgccgactgcagaagtgtgtgacccagggcatgagccgggatgcggtgaagttt
ggtcggatgtcaaaacgtcagcgggagtctctgaatgccgaggtggagagacaccgtcag
cagcagcagcagcagcatctccaggcagaggcccaactcgccctgccctaccccagcaag
gcatgccgtttccggacaccccacctgctccaggccccggctccggcctactccttccct
ggagagccagagctgccaccctgcccgacagatgtgctcccctacctggtgtgctcccca
ggcgagtcccaggctccaggtctggcctaccagggctcctgtgtgtctcctggtagtggg
cactcagacgaaagagggttcgactcccgtcagccgtctcctgaccagacgacagggatg
ggaattagatcgtatgacccagaagacccttactgcccttaccccccctcccactccctg
ctacacatagaggagctgtgtgacagtatcgtgcggtcccatagggacaccagtcagttc
agactagaggaactacaggctctgagatggaagttgttcagcagagaggagatccatgcc
taccagagcaagtcagtagatgagatgtggcagcactgtgccgtgaggctgactgaagcg
gtacagtacgtggtggagtttgccaaaagcatcccagggttccgtgggcttggacagaac
gaccagatcaccctgctcaagactggatcgatggaggtggttctggttagaatgagcagg
tgttttaacacagagaacagcaccgtcttcttcgatgggaagtttggcagcactgaactt
ttcaagtctctgggctgtggtgatctgatggtggcggtgtttgacttcgctcacagaatg
tgtgccctgagactgactgagcagcagatggctctcttcagctcactggtgctcattaac
cccgatcgcccctgtcttgaggatagaggcagagtacatagaatgagaagagacttggag
gaatgcctcagccacatgctacgcagagacaaccaggagagccttcagcacaagctctac
cagaaggtgtcagtgttgcggtctctgtgcagtcttcatgtggagaagctgcactggttc
agccagcgctacccgctcaccgtccactctgtcttccctcctctatacaaggagctgttc
acctctgacctgccttctgtggactccctgtga
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