Oncorhynchus gorbuscha (pink salmon): 124017601
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Entry
124017601 CDS
T07892
Name
(RefSeq) proline-rich protein 36-like
KO
K14416
elongation factor 1 alpha-like protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124017601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124017601
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124017601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBS1_N
FAM75
Motif
Other DBs
NCBI-GeneID:
124017601
NCBI-ProteinID:
XP_046188759
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MSRHRNVRGCNYDEDKLNSCLDQMREVLGDTVPESVLTQVALQCAFDPERALDTILSGES
TGAPPRSAKTHQDAPLPQGANKEGPLPQRANKDMTAAPRSNQEASATPQPKKGACLSNSD
TVLTPTLCPPTDPLNLSDLLARPVKGHCHDTHNLSTSTLNFAAGSARPMATVAEAGSSSS
LAQLMSEHVQKGQRVGLPSLSSSTLAVLSGLSLGTLALLNSNSAPIATSPPNHLASSLGS
LSLGNPKLTAPSANMAPPSFGSLSSVLQSSRPMEIATGGGAKGADPKGSPSLAELIQEHS
NSSPTLYSTLPGLYGNSSIPIAHGDTAQTAVGPAPALTRSLSHLPQPQGPLNTHCSPKTQ
ITTTPEPQVLPLSLLASHRQPVSTVPAADPDGQVVPPPGLLGELSPLASQHHNRTFSDTP
PSLSLAALLSPGKPQPRSIQEGGVRDKPRPLLSPTPLSLRPPWGDQSVDLSALMAQSSHG
GVLFARRHDKGLSSPSAVALRSDHHRHGSSVFARPSVFALTLSVRAPSRGKRRRMMMMKE
AVGDLRLEVGGGGGGHPAFLYGTQTQLVKAKEHTPLLPITPFTFDTPSPDDVVRANQKKA
FTRE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacagaaatgtccgaggctgcaactacgatgaagacaagctgaactcctgt
ctggaccagatgcgtgaggtgctgggtgacacagtgccagagtctgtccttacccaggtt
gccttgcagtgcgccttcgaccccgagagagccctggacaccatcctatcaggcgagagc
accggtgctccgccccggtccgctaagacgcatcaggacgcaccactgccccagggagcc
aataaggaaggaccactgccgcagagagcgaataaggacatgacagctgcgccaagatcc
aatcaggaggcatcagccaccccacaaccaaagaaaggagcctgcctatccaactctgac
actgtactcacaccaactctatgtccacctaccgatcctctgaaccttagtgacctccta
gcgcggcctgtgaaaggtcattgtcatgacactcacaacctctccacttcgactctgaat
ttcgcggcgggttccgcaaggcccatggcgacggttgccgaggcggggagcagcagcagc
ctggcccagttgatgtctgagcatgttcagaagggtcagagggtgggactcccctcactg
tcctcatctactctggctgttctttctggcctgtcattgggcactctagcgttgttaaac
tccaactccgcccccattgctacaagtccccccaaccaccttgcctcctctttgggtagc
ttgtccttaggcaaccccaaactgacagctccgagcgccaatatggcccctccctccttc
ggcagcctgagctccgtcctccagagcagccgaccaatggagatcgcgacaggggggggg
gctaagggggcggatcccaaaggaagcccgtcattggctgagctgatccaggaacattcc
aacagcagccccaccctctacagtacactccccggtctctacgggaacagctcaatcccc
attgcccacggcgacacagctcagactgccgtcggaccagcgccagctctcacacgctcc
ctgtcccatctcccacaaccccaaggacctctgaacacacactgttcccccaagacccag
atcacaacaacaccagaaccccaagtcctccctctgtctctgctggcctctcaccgtcag
ccagtaagcacggtgccagcagcagacccagacggacaggtagtaccacctcctggccta
ttgggggagctctctccactagcctctcagcatcacaacagaactttctccgacacccca
ccatcactctccctcgccgcgctcctgtcaccagggaaaccacagccgagaagtatccaa
gagggaggagtcagagacaaaccccgcccccttttgtcacccactcccctgagtctccgc
ccaccatggggtgatcagagtgttgatctaagcgctctcatggcccagtcgtcccacggt
ggagtgttgttcgcacgtcgccatgacaaaggcctctcctcgccgtccgcggtcgccttg
aggtcagaccaccaccgccacggttcctctgtgttcgctcgaccgtccgtcttcgccctg
accctgtcggtgcgtgcgcccagccgggggaagaggaggaggatgatgatgatgaaggag
gctgtgggagatctgaggttagaggtcggaggaggaggagggggtcacccggcgtttctg
tacggaacacagacccagctggtcaaagctaaagaacatacgcccctcttacccataacc
cctttcaccttcgacacgccctcccccgacgacgtcgtacgagccaatcagaagaaggcc
ttcacccgcgagtaa
DBGET
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