Oncorhynchus gorbuscha (pink salmon): 124017799
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Entry
124017799 CDS
T07892
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ogo01001
]
124017799
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124017799
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124017799
Protein kinases [BR:
ogo01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
124017799
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124017799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
PHD-1st_NSD
PML_CC
Trm112p
PRANC
DUF1351
ParB
DUF5054
Motif
Other DBs
NCBI-GeneID:
124017799
NCBI-ProteinID:
XP_046188967
LinkDB
All DBs
Position
Unknown
AA seq
1144 aa
AA seq
DB search
MDESPEAAVDNDDLVIIVENEAESLPAEEERAKQLGGSIGLMDTCPVCKLNFHNREPKLL
PCLHSFCKKCLPPPSRNLVNSEQRRDPQLQADNSKPREILNVIRCPVCRQECWEVEVLDN
FFVKDSVEVPSSTVEKTSQVCMSCDDNTEATGFCVECVEFLCVTCIEAHQRVKFTRDHTI
RQKEEMSPEAVGASSQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDA
YRNHRQHLENMTHQLQEKRKAIEEVSNCINNGLQQVDENRKSVTNEIKKSICNLIMEINR
KGKILVNQLETLTKDHEVGLKKQQEDVSHLTRHLDHVINFTKWATASHSGTALLYCKRLI
LCQIHYLMRANCNASIVPQSSVRFQCRSGFWASNVDLGSLAVERIPGRQPSSMQQGFPPG
HPSQPGPRGEGPPGAFPPGSSAHQRGSTLAQLQLQVEKLAQHPNRAGQPPPNHWSWYQQG
LKLPGPGGPPPQRPHQGGSPSQGPPNMVQIQQPGRSYGPQTHPNPRSPTSMLQNAGFPPQ
SLRDLIHNSSFPPKPMDVLQGTSRYSHAPPPNTGPISTQASIHQRNMMEAAQLRRNDPSG
ASSSLSMPNPRASYAPSLATAFPDRHAQGRQNSPMSKSSSEANIGSASWKRTEPNAAAPP
SSAKRRRRSSPGPIIVIKDEPEDDDEVSFVQSSVGASASLPDSSTGIQPKPQPQQQSLPA
PMVEPQPEPQPEPQPEPQPEPQPEPQPEPQPETQVELEADPQPDPEKAPGVPEDDPNEDW
CAVCQNGGELLCCDRCPKVFHLNCHIPTLRESPSGEWFCSFCRDLTSPEMEYNPDSQGEL
PAMKEEPGSEGFPPVDKRKCERLLLCIYCNEFSTDFQEPASPSSIPEYKELIETPMDLSI
VKSRLESKESPRYCSAEEFVKDVRLIFRNCAKYYQADTEVGGAGLSLEEYFEEQLKFLYQ
DRSFPGGREEGMIPPVEDEMEEGMEDDGMAPNEGDMPPVEDDLTPVEEGMPSMEKEGTGE
GMDPVEGEMEEDGIPPLEESMEEEETSPVKEDSLPSDATEPVDPSIRGTSSPNLSSKEAL
QPLSDTPDNPPCEEAPQPLSDTPDNPPDSQGTSTADSQDTNPAAGLATENEGITEEVRDK
AEEE
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagcccagaagctgctgtggacaacgatgaccttgttattatagtggaaaac
gaggcagagagcttgccagctgaagaggagagggcgaaacagctaggaggtagcatcggt
ctcatggacacttgccctgtctgtaagttgaatttccacaatcgagagccgaaacttctg
ccatgcctccactctttctgcaagaagtgtcttccacccccttcaaggaacttagtcaac
agtgaacaacgtcgcgacccgcaacttcaagcggacaactcgaaaccacgtgagatcctc
aatgtgatccgctgcccagtttgtcgacaagagtgctgggaggtggaggtgctggataac
ttctttgtgaaggactctgtggaggttcccagcagcacagtggagaagaccagtcaggtg
tgtatgagttgtgatgacaacaccgaggccacggggttctgtgtggagtgtgtggagttc
ctgtgtgtgacgtgtattgaggcccaccagagggtcaagttcaccagggatcataccata
cggcagaaggaggagatgtccccagaggctgtgggtgcgtcctcacagaagccagtgttc
tgtgacatccacaagcaggagcccctcaaactgttctgtgagacctgtgaccgtctcaca
tgcagggactgtcagctgctcaagcacaaagaccacaattaccagttccttgaagacgcc
tacagaaaccacaggcaacacctggaaaacatgacgcatcagctacaggagaagaggaaa
gccatagaagaagtgtccaattgcatcaacaatggactccagcaagtcgatgaaaaccgc
aagtctgtcaccaatgagataaagaagtcaatttgcaacttgatcatggagatcaacaga
aagggaaaaatcttggtcaatcaacttgagacactgacgaaggaccatgaggtcggacta
aagaaacaacaagaagatgtcagccacctgaccagacatctagatcacgtcatcaacttc
accaagtgggccacagccagtcacagtggcacagctctcctgtactgcaagagactgatt
ctttgccaaatccattacctaatgagggccaactgtaatgcatccatcgtccctcagagc
tcagtccgcttccagtgtcgctccggtttctgggcctcaaatgtcgatcttgggtctttg
gcagtagagagaatccctggtcggcagcccagttccatgcagcagggcttccctcctggc
caccccagccagcctggccccagaggagagggccctcccggggctttccctccaggctcc
tccgcccaccagcgtgggagcaccctggctcagctccagctgcaggtagagaagcttgcc
cagcaccccaacagggctggacagccccctcccaaccactggtcctggtaccagcagggt
ctgaagctcccagggccagggggcccccctccacagaggccccaccaggggggttctccg
tcgcaaggtccccccaacatggtccagatccagcagccgggccggagttacgggccgcaa
acccatcccaaccccaggagccccacctctatgctgcaaaacgcaggattccctcctcag
tctctgagggatctcatccacaactccagctttcctcccaaaccaatggatgtgctacag
ggtacctctcgctactctcatgcaccccctcccaacacaggacccatcagcactcaagcc
tctatacaccagcgtaacatgatggaagccgcacaactgaggaggaatgaccccagtgga
gcttcatcatcattatccatgcccaaccccagagctagttatgctccgagcctagctact
gccttcccagacagacatgcacaaggaagacagaattcccccatgtccaaatcttcctct
gaagccaacatagggtctgcttcctggaagcgcacagagcctaatgcggcggctcccccc
tcctcagctaagcggaggcgaaggtcatcccccggaccaatcatcgtcatcaaggacgaa
ccagaggacgatgacgaagtcagctttgtgcagtctagtgttggagcctcagccagcctg
ccagacagcagtacaggcatccagcccaagccccagccccagcagcaatctctcccagca
cccatggtggagccccagccggagccccagccggagccccagccggagccccagccggag
ccccagccggagccccagccggagccccagccagagacccaggtagagctagaggcagac
ccccaaccagacccagaaaaggccccaggtgtccctgaagacgaccccaatgaagactgg
tgcgctgtgtgtcagaatgggggagaactgctctgctgtgacagatgtcccaaagtcttc
catctgaactgtcatatacctacacttagagaatctcccagtggtgagtggttctgttcg
ttctgtcgtgacctgaccagtcctgagatggagtataacccagatagccagggagaattg
ccagccatgaaggaggagccaggatcagagggattccctccagttgataaaaggaaatgt
gagagactgttgctctgcatctactgcaacgagttcagtacagatttccaggagcctgcc
tcaccgtcgtcaatcccagagtataaggagctgattgagactccaatggacctgtccata
gtgaagagcaggctggaatctaaggagagcccgcgttactgcagtgctgaggagtttgtc
aaggatgtcaggctcatattcaggaactgtgcaaagtattaccaggcagacactgaggtg
ggaggtgcaggactgagcctggaggagtactttgaggagcagctgaagttcctctaccaa
gacaggagcttccctgggggcagagaggagggcatgataccccctgtggaggatgagatg
gaagaagggatggaagacgatgggatggctcctaacgaaggggatatgccccctgtcgag
gacgacctaacacctgttgaagaagggatgccttctatggagaaagaaggaactggagag
gggatggatcctgtagaaggagagatggaggaagacgggatacctcctttagaagagagc
atggaagaggaagagacttctccagtgaaagaagactcattaccttctgatgctactgaa
ccagtagatccatcaataaggggtacatcatctcccaacctttccagcaaggaggctctc
caacccctctcagatactccagacaaccctccctgcgaggaggccccccaacccctctcg
gataccccagacaaccctcctgactcccagggaaccagcactgctgactcccaggacacc
aaccctgctgcaggcttagccacagaaaatgaggggatcactgaagaagtgagagacaaa
gcagaagaggaatga
DBGET
integrated database retrieval system
