Oncorhynchus gorbuscha (pink salmon): 124018030
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Entry
124018030 CDS
T07892
Name
(RefSeq) syndetin-like
KO
K23288
syndetin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124018030
Membrane trafficking [BR:
ogo04131
]
Protein recycling
Others
EARP complex
124018030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DUF1059
Motif
Other DBs
NCBI-GeneID:
124018030
NCBI-ProteinID:
XP_046189238
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESIADLSPVEDFRIPSKEEMREMREQPIDPQAEQEIINSIQEV
YYSNDSFDMVQHELEKLPPELNLQELEEYRDQLKRQQAAVSKKVADLILEKQPSYVXXXX
XXXERVTSLQTNLQLAAVICTNARRQLSISKEDFTEASLGLLANQRRRHLLTGLLKSLRT
IKTLQRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQ
LDVALSKTCKHFDVSHYTRVQLAYTLLEKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELC
AGNADTKFQKMQYKDLCTHITQDSYVPCLSDLCKALWEVMLSYHRTMQWHEEQDKEEPPP
TTDEAVAADTEEAVVDHSYVKKKLEHGLTRIWQEVQLKVKAYLLGTDMSNFKYDDFIVVL
DVISRLMQVGEEFCGSNSELLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKS
NFNIAQLHEFKFMGQSRSPSVSPSRQVLSSQDQVLSSKDQEVLSLFQHFSQEGNPFERHI
DNKDEETEDVLASNGYESDELEKCVYQDYDSDSDVPDELKQDYVDEQTGDVPLKSASRET
LRSRKKSDYSLNKGSNAPILTNTTLNVIRLVGKYIQMMNILKPIAFDVIHCVSQLFDYYL
YAVYTFFGRNDMYESSGPGLISSRLRTTLNRIQESLIQMDSLGEGSSIVHGGPGEDRKEK
VPSPHLSQLVVLTASETLYGLAQRVVATESLVFLAEQFEFLQSHLDTMMPAAKKPFLQQF
YSQTVSTASELRKPIYWVVAAKALDYEQMLLLMAGVKWDIREIMSQHNVYVDVLLKEFEE
FNKRLGDVSRHVRVPLPVSNVLWEHCIRLANRTLVEGYGNVKKCSNEGRALMQLDFQQFL
MKLEKLTDMRPIPDKDFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHIN
KKARQKLLAAIDDIDRPKR
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagataaagtcacttatggcccggcagggcctgaaaagcccacaggagagcatt
gcagacctcagcccagtggaggacttcaggatcccaagcaaggaggagatgagggagatg
agggagcagcccattgacccccaggcggagcaggagatcattaacagcatccaggaggtc
tactactccaacgactcctttgacatggtgcagcacgagctggagaaactcccacctgag
ctgaacttgcaggagctggaggagtacagagaccagctgaagagacaacaagcagcggtt
tccaaaaaagttgccgatcttatcctggaaaaacagccgtcctacgtnnnnnnnnnnnnn
nnnnnnnnngagagggtgacgtcattacaaaccaatctacagctggctgcagtgatttgc
accaatgctaggaggcagctgagtatttcaaaggaggacttcaccgaggccagcctgggg
ctcctagccaatcagaggaggagacacctgctcacagggctgctgaagtcactgaggacc
atcaagaccctgcaaaggactgatgttcgactcagtgagatgctggaggaggaggactat
cctggtgccatccagttgtgtctggaatgtcagaaggctgccagcacattcaaacactac
agctgcataagtgagttgaattccaagctacaagacactctggagcaaatagaggagcag
ctggatgtggccttgtctaaaacctgcaagcactttgatgtctcccactacaccagagtt
cagctggcgtacaccctcctggaaaagacccagacggccatggaccagctccacatgcac
ttcacccaggccatccacaacactgtgttccaggtggttctgggatacgtggagctctgt
gccggcaacgccgacaccaagtttcagaagatgcagtacaaggacctctgcacgcacatc
actcaagacagctacgtcccctgcctgagcgacctgtgcaaggcattgtgggaggtgatg
ctcagctaccaccggaccatgcagtggcatgaggagcaagacaaggaggagcccccaccc
accacagatgaagcggttgctgcagacaccgaggaggcggttgttgaccacagctatgta
aagaagaaactggagcatggactcactcgaatctggcaggaagtccagctaaaagtgaaa
gcctatctgcttggtacagacatgtctaacttcaaatatgacgacttcatcgtggtcttg
gatgttatcagcaggctgatgcaagtgggggaggagttctgcggcagtaactcagagttg
ctgcaggaatccatcaaacgtcagagcgtaaactacttcaagaactaccacaggacacgc
ctggaggagttgcggatgtttctggaaaatgagacgtgggaactgtgtcctgtcaagtcc
aacttcaacatcgctcagctccatgagtttaagttcatgggccagagccggtccccttca
gtgtctcccagtagacaggtgttgtccagtcaggaccaggtgttgtccagcaaggaccag
gaagtcctgtctctgtttcagcacttcagtcaggaggggaacccctttgagaggcacatc
gacaacaaagatgaggagactgaggacgtactggcctccaacgggtatgagtccgatgag
ctggagaagtgtgtgtaccaggactatgacagcgacagtgacgtccctgatgaactcaag
caggactacgtggacgagcagaccggagacgtccctctcaagagtgcatcaagggagacc
ctgcgcagcaggaagaagtccgactacagcctaaacaaaggctccaacgctcccatcctg
accaacacaaccctcaacgtgatccgactggtcgggaagtacatacagatgatgaacatt
ctgaaaccaatagcctttgacgtcatccactgtgtttcccagctgtttgattactacctg
tatgctgtctacaccttcttcggccgcaatgatatgtatgaatcatcaggtccaggtctg
atcagcagccgactgagaacaacactgaacagaatccaggagagcctcatccaaatggat
tctctgggggaaggcagctccatcgtgcacggtggtccgggggaggacagaaaggagaag
gtgcctagcccccacctcagccagcttgtggtcctgacagccagcgagaccctctacggc
ctggcccagagggtggtcgccacagagtcactggtgtttctggccgagcagtttgagttc
cttcagtctcacctagacaccatgatgcctgcagccaagaagccgttcctccagcagttc
tactcacagactgtctccacggccagtgagctacgtaaacccatatactgggtggtggcg
gccaaggctttagactacgaacagatgctgctgctgatggctggagttaagtgggacatt
agggagataatgtcgcagcacaacgtgtacgttgacgtcctgttaaaggagtttgaagag
tttaacaagaggctgggtgatgtgtccagacacgtccgggtccctctgcctgtgtctaat
gtcctgtgggaacactgcatccgtctggccaacaggacgctggtggaaggctatggtaac
gtgaagaagtgcagtaacgaagggcgggccctgatgcagctggacttccagcagttcctg
atgaagcttgagaagctgacggacatgaggcccatccctgacaaggactttgtggagacc
tacatcaaagcctactacctgactgagaatgacatggagcagttcatcaagaaccacagg
gagtactccatgaagcagctggccaacctggtgaacgtgtgtctgggctctcacatcaac
aagaaggcccggcagaaactcctggcggctatcgacgacatcgacagaccaaagagatag
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integrated database retrieval system
