Oncorhynchus gorbuscha (pink salmon): 124018088
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Entry
124018088 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: neogenin-like
KO
K06766
neogenin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04350
TGF-beta signaling pathway
ogo04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124018088
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124018088
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124018088
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
DCC/UNC5 family
124018088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Ig_RIMBP2
Tissue_fac
fn3_2
SusE
EphA2_TM
Herpes_UL74
Bile_Hydr_Trans
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
124018088
NCBI-ProteinID:
XP_046189299
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MYTAPEVWLTPLAPPLRPRDVVASLVSTRFIKLTWRPPAEPNGDDLTYSVYFNQEGTNRE
RILNTSRPGEMQVTIQNLMPDSKYKFRVVAHNKNGLGESSAVLKVATQGEVQVPGPAPNL
QAVSTTPTSVTLSWDTPLTGNGDVLTYKVYYMEKGLDTSQDIDAGALSYTLMGLKKFTEY
SIRVVAFNKHGPGVSTETVSVTTLSDVPSAPPQNLTVEVHNSKSIMVRWQPPPPGAQNGE
ITGYKIRYRKGTRKSEAAETTGGTQLFQLIDGLSGGTEYTIRVSAITVNDDGPXTEWSTA
ETSLEHLDESRVPDIPSSLHVRPLVNSIVVSWTPPENQDMVVRGYTIGYGIGSPHAQTIK
VDYKQRYYSIENLDPSSHYVITLKAFNNVGEGIPVYESAITRPQSDPIDPDVDVYELFHA
PYTPVPDPTPMLPPVGVQASVLSHDTIKVTWADNSLPKNQKITDARYYTVRWKTNIPANT
KLKTANTTNLSHMVTGLKPNTLYEFSVMVTKGRRTSTWSMTAQGTTFETIPSSSPKDVTV
VSKELKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDWVIEPVVGNRLTHQIQELT
LDTTYYFKIQARNSKGMGPMSEAVHFRTPKTESSDKMANDQANLPVKPGSNQPPLDHGFG
SSHGKPGITGSGDNHILVIVVIISVGAFTIIVVVVGAFLCTRRTTSHQKKKRAASKSSNS
SHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEPNPVMTDTPIPRTSQDINPVDPSLDNS
LLQRRNSYRGHESEDSISALAGRRGMRPKMMMPFDTQPPQPVISAHPIHSLDNHHHHYHT
GSLASPTRSYLHHHQGSAHLRPHTCATPISYLDMVGSTESVRNTPSTEPLPPQAQPPCQA
EHQHPEPEGSYQDSTATDDEPSASGSYCSAGQPPTAHVRPTHPLKSFAVPANPAAIFESP
ALPSMPLLTQTGPQLHSVKTASIGTLGRVRPPMSVTVPSAPDVPETSKMLEDVDSSYEPD
ELTEEMAHLEDLMKDLNAITTA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgtacacagctccagaggtgtggctcaccccactggccccacccctccgcccccgtgac
gtcgtggcctcgctggtctccacccgcttcatcaagctcacctggcgccctcctgctgag
cccaacggagacgacctcacctactctgtctacttcaatcaggagggtaccaacagggag
cgtatcctgaacaccagtcggccaggtgagatgcaggtcaccattcagaacctgatgccc
gactccaagtacaagttccgggtggtggcacacaacaagaacggcctgggagagagctct
gccgtcctcaaggtggccacccagggtgaagtgcaagttcctggccccgcccccaacctg
caggctgtgtcgaccacacccacctccgtcaccctcagttgggacacgcccctcactggt
aacggagacgtcctcacctacaaggtctactatatggagaagggtctggacacctctcag
gacatagacgctggagctctgtcctacaccttgatgggtctgaagaagttcacagagtac
agcattcgagtggtggccttcaacaagcacggtccgggagtgtccacagagacagtatca
gtcaccaccctgtctgatgtccccagtgcccctcctcaaaacctcactgtggaagttcac
aactcaaagagcatcatggtccgatggcagcccccaccaccaggcgcccagaacggcgag
attactgggtataagatccgttaccggaaaggaacgcggaagagcgaggcggcagaaacc
acgggaggcacccagctattccaactcatcgacggcttgagcggggggacagagtacacg
atcagagtatcagccatcacagtgaacgacgacggcccgnccacagagtggagcaccgca
gagacctctcttgagcacctggacgagtccagggtgccagacatccccagctcgctacat
gtgcgcccgctggtcaacagcatcgtggtgagctggacgccgccggagaaccaggacatg
gtggtacgaggctacaccatcggctacggcatcggcagcccccacgcccagaccatcaag
gtggactacaagcagcgctactacagcattgagaacctagaccccagctctcactatgtg
ataaccctgaaggccttcaacaacgtgggggaggggatccctgtatacgagagcgccatc
accaggccacagtcagaccccatagaccctgatgttgatgtgtatgaactcttccatgcg
ccatacacaccagtaccagaccccacccccatgctacctcccgtgggcgtacaggcctcg
gtgctcagccacgacaccatcaaggtgacctgggccgacaactctctgcccaagaaccag
aagatcacggacgcacgctactacacggtgcgctggaagaccaacatccccgccaacacc
aagctcaagacggccaacaccaccaacctgagccacatggtgacgggcctgaagcccaac
acgctctatgagttctctgtcatggtgaccaagggccggaggaccagcacctggagcatg
acggcccagggaaccacctttgagaccattcccagctcgtcccccaaagatgtgactgtg
gtgagcaaggagctgaaaccacgtaccattatagtcaactggcagcccccctcagaggcc
aatggaaaaatcacaggctacataatctactacagtactgatgtgaatgcggaggtgcat
gactgggtgatagagccggtggtgggcaacaggttgacccaccagatccaggagctgact
ctggacaccacctactacttcaagatccaggcccgtaactccaagggaatgggcccaatg
tccgaggccgtacacttccgcacccccaagactgaatcctctgacaaaatggctaatgac
caagccaatttgccagttaaaccaggaagtaaccaaccacctcttgaccatggctttggg
tcttcacacggaaaaccaggaattacaggaagtggggacaaccacatcctggtcatcgtc
gtcatcatctctgtgggagcgttcaccatcattgtggtggttgtgggggccttcctctgc
acacgacgcaccacctcccaccagaaaaagaagcgggcggcctccaagtcgtccaacagc
tcccacaagtacaagggcaactccaaggacctgaagcctccagacctatggatccaccac
gagcggctggagctcaagcccattgacaagtcccccgagcccaacccggtgatgactgac
acccccatcccccgcacctcgcaggacatcaaccccgtggaccccagcctggacaacagc
ctgctgcagagacggaactcctaccgaggccacgaatcagaagacagcatatctgcgctg
gcagggcgccgggggatgcggcctaaaatgatgatgcccttcgatacgcagcccccccag
cctgtgattagcgctcaccccatccattcccttgataaccatcaccaccattatcacacg
ggcagcctggcatccccgacacgcagctacctccatcaccaccagggcagtgcccacctg
cgcccgcacacctgcgccacccccatctcctatctagacatggtgggctccacagagtcg
gtgaggaacacccccagcacagagcccctcccaccccaggcccagcccccctgccaagcc
gagcaccagcacccggaacccgagggcagctaccaagactccacggccaccgacgatgag
cccagcgccagcggcagctactgcagcgctggccagccccccaccgcccacgtgcgcccc
actcaccccctcaagagctttgccgtgcccgccaaccccgccgccatcttcgagtcgccc
gccctgcccagcatgccgctgcttactcagactgggccccagctccactcagtaaagaca
gcctccatcggcaccctgggcagggtacggccccccatgtcagtcacggtgcccagtgcg
ccagacgtgcccgagaccagcaagatgctggaggatgtagacagtagctacgagcctgat
gagttgacagaggagatggcccacctagaggacctgatgaaggacctgaacgctataacc
acagcctga
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integrated database retrieval system
