Oncorhynchus gorbuscha (pink salmon): 124018094
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Entry
124018094 CDS
T07892
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124018094 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124018094 (cstf3)
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
124018094 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_19
TPR_6
TPR_16
Motif
Other DBs
NCBI-GeneID:
124018094
NCBI-ProteinID:
XP_046189309
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MATEATADQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAVQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQY
LDQSSKLLAEKGDMNNSKVFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRLKHEKVH
SIYNRLLAIEDIDPTLVYIQYMKFGRRAEGIKSGRIIFKKAREDMRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAALLQTETVVTPSAPTQKDEADRKPEYPKPDTSQMIPYQPRHLAPP
GLHPVPGGVFPVPPAAVILMKLLPHPYQLPTCYTNTPFVQVDELMESFRRCTLPETVDAA
VELITGRQPDAGGEGNGSMENHAMTKSLKRPNADSDEEEDKGAVAPPVHDIYRARQQKRI
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggccacggaagcaaccgccgaccaggcagctgagtatatcccggagaaggttaagaaa
gcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgattcga
gaagcacagaaccaaccaatagacaaagcaaggaagacttatgaacgacttgtggcccag
ttcccaagctcgggcagattctggaaactattcattgaagcggagatcaaggcaaaaaac
tatgacaaggtagaaaagttgtttcagagatgtctgatgaaagtgctgcacattgacctg
tggaaatgctacctctcctacgtccgagagacgaaaggaaagctacccagctacaaagag
aagatggcgcaggcgtatgactttgcgctggataaaatcggcatggagatcatgtcctac
cagatatgggtggactacatcaacttcctcaaaggagttgaggcggttggttcgtacgct
gaaaaccagcgaatcacggcggtgcgcagggtctaccagaggggctgtgtgaaccccatg
atcaacatcgagcagctctggagagactacagcaagtatgaggagggcatcaatgtacat
ctggccaagaagatgattgaggaccgcagcagagactacatgaacgctaggagagtggcc
aaggaatatgagactgtgatgaagggtctggacaggaacgccccctcggtgcccccacag
aactccccccaggaggcggtgcaggtggagatgtggaagaagtacatccaatgggagaag
agcaacccgctccgcacagaggaccagacactcatcactaagagagtgatgtttgcctat
gagcagtgtctgttggtgctgggtcatcaccctgatgtgtggtatgaggctgcccagtat
ctggaccagtccagtaaactactggcagagaagggggacatgaacaactctaaggtgttc
agtgacgaagcagctaacatctacgaacgcgccatcggtactctactgaagaagaacatg
ctgctgtacttctcattcgctgactacgaggagagtcgattgaagcatgaaaaggtccac
agcatctacaaccgtctgctggccatcgaggacatcgaccccacgctggtctacatccag
tacatgaagtttggcaggcgggccgagggcatcaaatcaggccgcatcatctttaagaag
gcccgggaggacatgcgcacgcgtcaccacgtctatgtgactgcagcactgatggagtac
tactgcagtaaggacaaatcagtggcctttaagatatttgaactgggcttgaagaaatat
ggagacattccagagtatatacttgcatacatcgattacctctcacaccttaatgaggac
aacaacaccagagttctgtttgagcgtgttctcacctcaggaagcctgtcgccagagaag
tctggtgagatctgggcacgtttcttggcctttgagagtaacatcggggacctggccagt
atcctgaaggtggagcgcaggcgtttcacggccttcaaggatgagtacgaaggcaaggag
acagccctgctggtggacagatacaagttcatggacctgtacccctgttctgccagcgag
ctcaaagccctcggatacaaggacgtgtcccgtgccaaactggcggcgttgctccagaca
gagacggtggtgactccatcggctccaacgcaaaaggacgaggccgatcgcaaaccagag
taccccaaacctgacaccagccagatgatcccctaccaaccacgacacttggcccctcca
ggactgcaccctgttccagggggggtgttcccggtccccccagccgcagtcatcctgatg
aagctactgcctcacccctaccagctacccacctgctataccaacaccccctttgtgcag
gtggatgaactgatggagagcttcaggagatgtacactaccagagactgtagatgcagca
gtagagttgataacgggcaggcagcctgatgccggcggagaagggaacggttccatggag
aaccacgccatgaccaagtcactgaagagacccaatgcagactctgatgaagaggaggac
aagggcgctgtggccccacccgttcacgacatctaccgcgctcgccagcagaagaggatc
cggtga
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integrated database retrieval system
