Oncorhynchus gorbuscha (pink salmon): 124018096
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Entry
124018096 CDS
T07892
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1-like
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124018096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124018096
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
124018096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
RHG20_PH
PH_BUD3_C
IQ_SCN5A_C
PH
DUF3362
Motif
Other DBs
NCBI-GeneID:
124018096
NCBI-ProteinID:
XP_046189322
LinkDB
All DBs
Position
LG03:complement(104248049..104336722)
Genome browser
AA seq
1593 aa
AA seq
DB search
MPRAELVLVVLVVLVVLLVLVVLVALLVLVALLVLVVLVVLFGMLFMASPHLSSPLPSSP
AVYQGMLFMASPHPASPLPFLPAVNDGKLFMASPHPPSPLPSSPAVYQGMTFMASPHPSS
PLPSSPAVYQGMTFMASPHPSSPLPSSPAVYQALHDLSSWPRPTGPPIPTPPPGPPVAPP
SPASLAWVQRTRYQPASLALRKQEEEDNKRCKALSDSYELSTDLQDKKVEMLERKYGGYF
LSRRAARTIQTAFRQYRMNKNFERLRSSASESRMTRRIILSNMRLQYSFDERQGQTQGQG
QPQGQGQTQTQPQGQGQPQGQGQTQGQGQPQGQTQTQGQGQTQTQTQPQGQGQPQGQGGQ
RYPHPGRGQPGDGEMEAGSPPLCQGDIEYTHLDETFSKQVKSLADSIDDVLTCQSGVEDF
QEEEEEEEEGDGGETGVVADDFGECVWRPREGDRQRGGGRGRGGERQSMHEDSIATSYSD
VTLYIDDPSSPLSLDRGPSSTDTEYWSPGVGGVGVGGREDSRDTEGGGSSNSRRSTPCTE
CRDYSLRGAHLPLLTIDPPSDSSVDMSDRSDRGSIGRLVYETEPGGGGGGGGEGRSPHGT
IKHNPHPNPHPNPNGHPAPHPAPPPPGQPLTPLSSSSSTTLPPGGLEQVCCSDGDNDSLN
STTNSNDTINCSSGSSSRDSLREPLPPLGKQTYQRESRQSWDSPALNNDVVQRRQYRIGL
NLFNKKPEKGIQYLIERGFVSDTPVGIARFILERKGLSRQMIGEFLGCRQKQFNKDVLDC
VVDELDFSGMDLDDALRKFQAQIKVQGEAQKVERLIEAFSQRYCVCNPVLIRQFQNPDTI
FILAFAIILLNTDMYSPNVKPEKKMKLEDFIKNLRGVDNGQDIPRDLLVGIYRRIEKWEL
RTNDDHVSQVQAVERVVVGKKPVLSLPHRRLVCCCQLYEVPDPNRSQRTGVHQREVFLFN
DLLVVTKIFQKKKTSVTYSFRQSFPLVEMQVHMFQNQHYPHGIRLTSANPGGERKVLIVL
NAPSQQDRTRFTSDLRESITEVTEMEKYRVESELEKQKGVVRPVVGGAGGGGLGSGLKGE
AVNGTLGRPSLDDSYASADGLKRTALSSSLRDLSDTGKRGRRNSVGSLDSTMEGSIISSP
RLHQRPHMAGGVMPPGSYDIQDYRPHRPILSPGMGVGGGPGLNHNTATGTTALVPSSGDR
GGTGALGSGSGGGGGSGGSFLGSLFGSKRSNTKPPGPLLPLLPPGLPHYPAPVPPPTTGG
PPPHSPSSLTHSDTGGPSKIQALHAQYCYNSTAGQQPPPPYHHHHRYHVQAGPAPSQPSS
TAQGAPGPHILHRGPMVGVPKRPDTGPAPSHPQLQQLSQVQLAQLQQHGVQCVQGPGPVP
SQGHGGCYTNMGVTMGVGCPTPPLSPHPPRSPGPAPLTLYHTYSTHGRGRGGGGAKLPLT
LSHSQPHPHAHTHAPHRTALTHNHSPHPGLSLSPHPGLSLSPHPAQHPKHQTHFIFAAPP
PQTPVARHIPQAAAHGQYHPQYPPLCSIPPPPTHSPLPPPSSPNTPLTPISPYTHPLQHQ
GGQQGSGGGNSSTGTGSTTSSKSKPINRISTVV
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgccaagggcagagttggtcctagtggtcctagtggtcctggtggtcctgttggtccta
gtggtcctagtggccctgttggtcctagtggccctgttggtcctggtggtcctagtggtc
ttgtttggtatgctcttcatggcctctccccatctctcctctcctctgccctcctctcct
gctgtgtaccagggtatgctcttcatggcctctccccatcccgcctctcctctccccttc
ttgcctgctgtgaatgatggtaagctcttcatggcctctcctcatcccccctctcctctc
ccctcctcgcctgctgtgtaccagggtatgaccttcatggcctctccccatccctcctct
cctctcccctcctcgcctgctgtgtaccagggtatgaccttcatggcctctccccatccc
tcctctcctctcccctcctcgcctgctgtgtaccaggctcttcatgacctctcctcgtgg
ccccggcccaccggacccccgatcccaacaccacccccagggcccccggtggcccccccc
agtcctgcctccctggcctgggtccaaaggacccggtatcagcctgccagcctggcgctc
cggaagcaggaggaggaggacaacaagcgctgcaaagccctgtccgacagctatgagctc
tccacagacctacaggacaagaaggtggagatgctggagaggaagtatggcggttacttc
ctgagtcggcgggcggcgcgcaccatccagacggcgttccgtcagtaccgcatgaacaag
aactttgagcggctgagaagctccgcctccgagagcaggatgactcggcgcatcatcctg
tccaacatgagactgcagtactcgtttgacgagcggcagggccagacccagggacagggc
cagccccagggacagggccagacccagacccagccccagggacagggccagccccaggga
cagggccagacccagggacagggccagccccagggacagacccagacccagggacagggc
cagacccagacccagacccagccacagggacagggccagccacagggccaggggggacag
aggtacccccaccctggaagggggcagcctggggatggagagatggaggctgggtctcct
ccactgtgccagggggacatagagtacacacacctggatgagaccttctccaaacaggtg
aagtccctggctgactccatcgatgatgtcttgacctgtcagtctggcgtggaagacttt
caggaggaggaggaagaggaggaggaaggtgacggaggcgagacaggggtggtggcggac
gactttggagagtgtgtttggagaccgagggagggagacagacagaggggcggaggaaga
ggaagaggaggagaaagacagagcatgcacgaggacagcatagccacctcctacagtgac
gtgaccctctacattgatgacccctcctcgcctctgtccctggaccgcggccccagcagc
actgacacagaatactggagccctggagtgggtggcgttggggtgggggggcgtgaagac
agccgggacacagagggagggggcagcagtaacagccgacgcagcaccccctgtacagag
tgtagagactacagcctgagaggagctcacctgcccctgctgaccatcgatccccctagc
gacagctctgttgatatgagtgaccgctcggatagaggttcgataggtagactggtctac
gagacagagccagggggaggtgggggaggagggggggaagggaggtcgcctcacggcact
attaaacacaacccccacccaaacccccaccccaaccccaacgggcatcccgcaccacac
ccagcacccccaccacccggacaacccctcacccctctgtcttcctcctcatccaccaca
ctgccccctggtggcctggagcaggtatgctgttcggatggagacaacgactctctcaac
tccaccaccaactctaacgataccatcaactgctcctccgggtcctcatcacgtgacagc
ctccgggagcccctcccaccgctcgggaaacagacctatcagagagagagcagacaaagc
tgggatagccccgcccttaacaatgacgtggtgcagagacgacagtaccgcatcggactc
aatctgttcaacaagaagccagagaagggtatacagtacctgatagagagaggcttcgta
tcggacacaccggtaggcatcgcccgcttcatcctggagaggaaaggactgagcagacag
atgataggagagttcctgggttgcagacagaaacagttcaacaaggacgtactggattgt
gttgtagatgagttggacttctcagggatggatctagatgatgccctcaggaagttccag
gctcagattaaagtccagggggaggcccagaaggtggagagactgatcgaggctttcagt
cagcggtactgtgtgtgtaacccggtactgatccgacagttccagaaccccgacaccatc
ttcatcctggccttcgccatcatcctcctcaacacagacatgtactctcccaacgtcaag
ccggagaagaagatgaagctggaagatttcatcaaaaacctcagaggagtggataatggt
caggacattcccagagacctgttagtaggaatctaccgtcggatagagaaatgggagcta
cgcaccaacgatgaccacgtgtctcaagtacaagctgtggagagggtggtcgtcggcaag
aagcccgtgctctcgctgccacaccgcagattggtgtgttgctgtcagctttacgaggtg
cctgaccctaacagaagccagaggactggagtccaccagagagaagtcttcctcttcaac
gacctgctcgtggtaaccaagatcttccagaagaagaagacctctgtgacatacagtttt
agacagtcattccccctggtcgagatgcaggtccacatgttccagaaccagcactatccc
cacggtatccgtctgacgtcggccaatcctggcggggagaggaaggttctgattgtatta
aatgctccaagtcagcaggacagaacacgcttcacctccgacctgagagagagcatcact
gaggtgacggagatggagaaatacagggtggagtcggagttggagaagcagaaaggggtg
gtgagacctgttgtgggcggggctggcggtggtggtctgggcagtggcttgaagggcgag
gcagtgaatggcactctgggtagacccagtctggatgacagctatgcctccgcagacgga
ctcaaacgtaccgcgctcagctcatcactgagagacctatcagacacagggaagcgggga
cgccgaaacagtgttggctccttggacagcacaatggaaggttccatcattagcagtccc
aggcttcatcagcgcccccacatggctggaggtgtaatgccacccggcagctatgacatc
caagactaccggcctcaccgccccatcctgagccccggaatgggggtggggggtgggccg
gggctaaatcacaataccgctactgggacgacggcactggttcccagcagcggagaccga
ggggggacgggagccctggggagcgggtctggagggggagggggcagtggaggctccttc
ctgggttccctgttcgggagcaagcgctccaacaccaagccccctggtcctctcctccct
ctcctcccacctgggctgccacactaccctgcacctgtccccccgcccaccactggcggc
ccgcccccacactccccctcctccctcacccactccgacacaggaggaccctccaaaatc
caggccctgcatgcccaatattgctacaacagtaccgcagggcagcagcctcctccgccc
taccaccaccaccaccgctaccacgtccaggcagggcccgctcccagccagccctcctcc
accgcccagggggcccctgggcctcatatcctccacaggggccccatggtaggggtcccc
aagaggccggacaccggtcctgctccctcccacccccagctccaacagctgtcccaggtt
cagctggcccagctgcagcagcatggtgtacagtgtgtacagggccccggtcctgttccc
tcccagggtcacggagggtgctataccaacatgggggttactatgggggtaggctgcccc
actccacccctttcacctcatcccccccgctccccggggcctgcaccccttacactctac
cacacatactccacacacggtcggggaagaggaggaggaggcgccaagctccctcttact
ctctcacactcgcaaccccaccctcacgcccacacccacgcccctcatcgtaccgctctt
acccacaaccacagcccccatcccggcctgtccctcagcccccaccccggactgtccctc
agcccccatcccgctcaacaccccaagcaccagactcacttcatcttcgctgccccgccg
ccccagacccccgtcgcccggcacatcccccaggccgccgcccacggccaataccaccct
caataccccccgctctgctccataccacctccccctacacactcccctttacccccccct
tcctcccccaataccccacttacccctatctccccttacacccaccccctccagcaccag
ggagggcagcaggggtctggcgggggcaacagcagcacggggacgggcagcaccaccagc
tccaagtccaagcctatcaaccgcatcagcacggtggtgtga
DBGET
integrated database retrieval system
