Oncorhynchus gorbuscha (pink salmon): 124018456
Help
Entry
124018456 CDS
T07892
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124018456 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124018456 (apex1)
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
124018456 (apex1)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
124018456 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
124018456
NCBI-ProteinID:
XP_046189739
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MSKRAKKNEQEAGDGDHDNGTAPAAKKGKKVKEPEAPILYSDPPDKMNSKDGRAANMKIT
SWNVDGLRAWVKKKGLDWVRDEAPDVLCLQETKCAEKSLPDEITSMPEFPHKYWAGSDEK
EGYSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFPTFFLVTAYVPNSGRGLVRLDYR
KTWDVEFKAYLSDLDKRKPLVLCGDLNVAHEEIDLKNSKGNKKNAGFTAEEREGFNQLLA
AGFTDSFRELYPEQANAYTFWTYMMNSRSKNVGWRLDYFVLSSALLPGLCDSKIRNQAMG
SDHCPITLHMVV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagagcgaagaaaaatgagcaggaggctggagatggtgaccatgacaacggc
acagcccccgctgccaagaaaggaaagaaggtcaaggaaccagaggcccccattctgtac
agtgaccctcctgataagatgaacagcaaagatggccgtgctgctaacatgaagatcacc
tcctggaatgtggatgggctcagagcttgggtcaagaagaagggccttgattgggtgcgt
gacgaggccccagatgtgctgtgcctgcaggagacgaagtgcgctgagaagtcccttcct
gatgaaatcacctccatgcccgagttcccccacaagtactgggctggctccgatgagaag
gagggctatagcggggtagctatgctgtgcaagactgagcccctcaaagttacctatggc
ataggtaaagaggagcatgataaggagggccgtgttatcactgctgagttccccaccttc
ttcctggtcaccgcctacgtgcccaactctggccgaggcctggtgcgcctggactatcgc
aagacctgggatgtggagttcaaggcctacctgagcgacctggacaagcgcaagcccctg
gtgctgtgtggcgatctgaacgtggcccacgaggagatcgacctgaagaactccaaaggc
aataaaaaaaacgcaggcttcacagcagaggagcgtgagggcttcaatcagctgctggct
gcaggcttcaccgacagcttccgcgagctgtaccccgagcaggccaacgcgtacaccttc
tggacctacatgatgaactctcgctctaagaacgtaggctggcgtctggactactttgtg
ctgtcctctgctctactgccaggcctttgtgatagtaagatccgcaaccaagctatgggc
agtgaccactgccccatcactctacacatggttgtgtag
DBGET
integrated database retrieval system
