Oncorhynchus gorbuscha (pink salmon): 124018711
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Entry
124018711 CDS
T07892
Name
(RefSeq) rho GTPase-activating protein SYDE1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124018711
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124018711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Anillin_N
Motif
Other DBs
NCBI-GeneID:
124018711
NCBI-ProteinID:
XP_046190017
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MAEPLLKRTFSRLRGKDRSRRKTDPKLNDIQRKSDVIQSASSSSLSTVTTAEAEPPTPPT
EDSTSTPRTQITVAKKQQWAKLASTPGTEGFHSLLYGACDSDSSSGKAQVSTSKQAWSQK
TLVEAGLDRRRCDDLDWEHQGQCSTSFCEPPPPVHTAVPEFTNPIGGYAEICVSSCMVKS
SGSGAYLQTLDRSSRAWVLSTGKSQAADESYSRLGLPPNCFAELRQRTEGDNNIWYNPIP
EEEDVLRGIGGLGRLRGGGGGLDSENPWRRRETEGLSETSRDPQMRSQRRAGMVVSPGTG
GGGGASRLERHATQNQCPSGGSSPDSAHQTKAITLDSSACSRRDRDGDSPDVIHQIQSEE
QSFGVAGGEGGVSVPSDSPGAQKKGGVASSMMDRIKSPGMVRKSLSMKMKKLPELRRKLS
LRSSRSHRHGKEGTGRGGGDGGGEGTSPPDVRKEQSNEVISRYHLDTSAPARPQRRSSRG
RSSAASKGGYLSDGDSPELLPKQGGPGGPSSAHNPPLPPPRSTHHSSQEGVTMTSDLSSF
RVYNLSDQPRCAQRVSGLLTVHLVGVEKLLRAPKQDASKEVFCAIQVDGVTRARTGLLTS
RGGSLPLNHTFNLELERARLLKLVVLTPYPGAETTTTKGSDSTAATRNRVCCLGAVSIPP
LFKASRSQQICVRLEPRGLLYVKLTLLEQWEPPDPRPCHLNPPMVFGVELRHLVDKENTA
APVPLLIQKSVAEIQKRGLRVVGLYRLCGSAAVKKELRDAFERDSAAVSLNEEVYPDINV
ITGILKDYLRELPSSLITRTLYEVVLEAMSLRPPPSRSSPGTSSPGRSEGDVQRSQSTVA
LLQCLPEPERATLSLLLDHLSLVASYSDCNRMNCQNLAVCFGPVLLTPTQESWRPTAPGQ
GGQGGRRESCGRGGRSFAHSEEIASAVDFKRHIEALHYLLQLWPIPTDRVTDNPDSPTLL
QPSCSSDVPPSPPMPHNPLPRRCQRGLSLPLDLPGDDVGVVSRRGRGRLESPPCNRYAGD
WSVCGRDFLSGGDADYDEVAGSDSEEEEEEREVKKVEWTQYVDDLVLDFDAPFTCRLSLK
DFDTLISDLERELSKQINICL
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacccctgctgaaacggaccttctctcggctgcggggaaaggatcgatcccgg
cggaaaacggaccccaaacttaatgacatccagcggaagagtgatgtcatccaaagcgct
tcatcctcatcgttgtcaacggtaacgacagcggaggccgaacccccgaccccgccaacg
gaggacagcaccagcaccccacgcacccagataacagtggccaagaaacagcagtgggcc
aaactggcctccacaccaggcacagagggctttcacagcctgctctacggggcttgtgac
tcggatagcagctcaggaaaggcccaggtctcaacctccaaacaggcctggagccagaag
acgttagtggaggccgggctggacaggaggaggtgtgatgatttagactgggagcatcag
ggacaatgtagcacctccttctgtgagcctcctccccctgtccacaccgcagtcccagag
ttcaccaacccgataggaggttacgctgagatctgtgtctcctcctgcatggtgaagtcc
tcggggtcaggggcctatctccagaccctggacaggagcagccgagcctgggtactgtcc
acaggaaagagccaggctgccgacgagtcctactcgcgtctaggcctcccccccaactgc
ttcgccgagctgaggcaacgcacagaaggggacaacaacatttggtacaaccctattcca
gaggaggaggacgtgttgcgtggcatcggaggtttaggacgtttaagaggaggaggagga
gggttagacagtgagaacccctggaggaggagggagacagaggggctgtcagagacatcg
agggatccccagatgaggagccagcgacgggcagggatggtggtgagccctggcaccggt
ggaggtggaggggcctcccgtttagagcgtcatgccacccagaaccagtgcccttcaggt
ggctccagcccagacagcgcacatcagaccaaagccatcacattagacagctcagcctgc
agtaggagagacagagacggagacagcccagatgtaattcaccagatccagagtgaggaa
cagtctttcggggttgcaggtggagaagggggtgtgtcagtcccctcagacagccccggg
gcccagaagaaagggggcgtggccagcagcatgatggacaggatcaaatctccaggaatg
gtccggaaatccctttccatgaagatgaagaaactccccgaactccgacgtaaactcagc
ctgcgctcctctcgttcccatcgccacgggaaggaggggacgggccgaggaggaggggac
ggaggtggagaggggacatcacccccagacgtccgtaaggagcagtccaacgaggtgatc
agcaggtaccacctggacacttcggccccggcgagaccacaacgacgctcctccagggga
cgttcctctgccgccagtaaggggggctacctgagcgacggagactcacctgagctgctg
cccaaacagggtggaccagggggaccctcctcggcccacaacccccctcttccaccaccc
cgctccacccaccactccagccaggagggagtgaccatgacctctgacctgagctcgttc
agagtctacaacttgtcggaccagccgcggtgcgcccagcgcgtctccggtctgctcaca
gtgcatctcgttggggtggagaaactgctgagggcccctaaacaggacgccagtaaggag
gtgttctgtgccatccaggtggatggtgtaaccagggcccgtaccggcctgctaacctcc
agggggggctctctgcccctcaaccacacctttaacctggagctggagagggccaggctg
ctgaaactggtggtgctcaccccttaccccggggctgagacgaccaccacgaagggcagc
gactccacagcagcgaccaggaacagggtctgctgtctgggggctgtgtccataccccct
ctgttcaaagcctctcggtctcagcagatatgcgttagattagagcccaggggtctactg
tacgtgaagctgaccctgctggagcagtgggagccccccgacccccgaccctgccacctc
aacccccccatggtgtttggagtggagctgcgccacctggtggacaaggagaacaccgct
gccccagttcctctgctcatacagaagagtgtggctgagatccagaagagaggactgagg
gtggtgggtctgtaccgtctgtgtggatcagctgcagtgaagaaggaactgagagacgcg
tttgagagggacagcgctgctgtcagcctgaatgaagaggtttatcctgacatcaatgtg
atcacaggcattctgaaggactacctacgtgagctgccgtcctcccttatcaccaggacc
ttgtacgaggtggttttggaggccatgtctctgagacctcctccttctcgctcctcccct
ggaacctcctctcctggcaggagcgagggagacgtacagcgctctcagagcaccgtggcc
ctcctgcaatgtctgcctgaaccagagagggccaccctctctctgctcctggaccatctg
agcctcgttgcctcctacagtgactgtaaccgaatgaactgtcagaacctggctgtgtgt
ttcggcccggtgctcctgacccccacccaggagtcctggagacccactgcaccaggacag
ggcggtcagggcgggcgcagggagagctgtggaaggggcggacggagttttgctcacagc
gaggagatcgccagtgctgtggacttcaagagacacatcgaggccttgcattacctgttg
cagctctggcccattcctacagacagagtgacagacaaccccgactctcccaccctcctc
cagccctcctgcagttcagacgtgcctccttccccccccatgccccataaccccctgcct
cggcgctgccagcgtggcctgtcgctgcctctggacctcccgggggacgacgtgggcgtg
gtgtcgcgacgtggacggggccgactggagagcccgccctgtaaccggtatgctggcgac
tggagcgtgtgtgggcgggacttcctgtccggaggcgatgcggactacgatgaggtggca
gggagcgacagtgaggaagaggaggaagagagggaggtgaagaaggtggagtggactcag
tacgtagacgacttagttctggactttgacgccccgtttacctgcagactgagtctcaaa
gactttgatacgctgatatcagacctggagagagagctgtccaaacagattaacatctgt
ctctga
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