Oncorhynchus gorbuscha (pink salmon): 124018907
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Entry
124018907 CDS
T07892
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04010
MAPK signaling pathway
ogo04260
Cardiac muscle contraction
ogo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124018907
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
124018907
04261 Adrenergic signaling in cardiomyocytes
124018907
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124018907
Ion channels [BR:
ogo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124018907
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
SepSecS
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
124018907
NCBI-ProteinID:
XP_046190194
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Position
LG03:22416947..22502562
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AA seq
1096 aa
AA seq
DB search
MLVKMLWNWKILVSHVYCASFLLFWIILGTAVAEVKGSPQGIPLSVVKLWASAFGGEIKS
ISAKYSGSQLLQKKYKELEKSVRVEEIDGMKVVKNLSKKMEEMFRKKKEAIRRLVEAAEE
AHLQHEENPELQYEYFNAVLINEVDEEGNNVELGGEFVLEPNDHFNNLSVNLSLSVVQVP
TNMYNKDPAIVNGVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGVKWHPDEHG
VIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNII
AYNQEIHYVEPCLNGTLVRADRNNKAHFREHLDKLFAKGIGLLGDALTEAFTILSDFNQT
GHGSVCSQAIMLVTDGATQMYDDVFAKFNWPDRKVRIFPYLIGRESAFADNMKWMACANK
GYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYMDSTGSIILSQAHKSRNKK
GPSLMTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKIIPKHLLGIHGYAFAITNNG
YILTHPDLRPLYQKGQKRRKPNYSSVDLSEVEWEDKDDFLRNAMVNRKTGTFSMEVKKTV
DKGKRLLKMHNDYYYTEVKGTPFSVGVALSRGHGKFFFRGNVSVEAGLHDLEQPDVALAD
EWTYCNTDEYYEHRSLSQIQAIKLYLTGRKPLIKCDRELIQEVLFDAVVTAPLEAYWTGL
ALNKSENSDKGVEIAYLGTRTGLSRTNLFVVQEDLSNQDFLTAEDKEGVFNADHFPLWYK
RAAEQVPGTFVYSIPFGGNENKSVVLASTAIQLLDDRKSPIVASVGIQMNLNFFQRKFWT
ASRQCAALDGKCTISCDNEDIKCYLIDNNGFILVTEDYSQTGEFFGEVEAAVMTKLLLIG
SFKRINLYDYQALCREYAGSSDSGHCLSHPFSIVKWLLTELVMFLLEFNLYSWWHVDLSV
KAQNSRGKTMLVPCDTEYPAFVSERTIKETTGNIDCEGCVRSFVIQQIPSSNLFMVVVDN
KCDCSSTLPVSMDPIEIMYNESLKCDRLKFQKDRKRPESCHPFHPEENAMECGGAAGLSA
PITGALLSLLATLFTR
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgaagatgctgtggaattggaagatcctcgtttcgcacgtgtactgcgccagc
ttcctcctgttctggattatactgggcacggcagtggcggaagtgaaagggtccccgcaa
gggattcctctctcagtggtgaagttatgggcctcagcgtttggtggagaaattaaatca
atttctgcaaaatactctggatcccagctgctgcagaagaaatataaagaattggaaaag
tctgtccgagtggaagaaattgatggcatgaaagtggtcaaaaatctatcgaagaagatg
gaggagatgttccggaagaaaaaggaggccattcggaggctggtggaggcagcagaagag
gcacatctacagcacgaggaaaacccagagctgcagtatgagtacttcaacgcggtgctg
atcaacgaggtggatgaggagggcaacaacgtggaactgggaggagagtttgtcctcgaa
cccaacgaccacttcaacaacctgtcagtcaacctcagcctcagtgtggtgcaggtgccc
accaacatgtataacaaagatcctgccatagtgaatggggtgtattggtcagaggccttg
aataaagtgtttgtggataactttgaaaaagatccgtccctgatatggcagtactttggc
agtgccaagggcttctttaggcagtatcccggggtcaaatggcatccagacgaacacgga
gtcatcgcctttgactgcaggaacaggaaatggtacatccaggcagcgacatctcctaaa
gacgtggtgattctagtagatgtgagtggcagtatgaagggcctgagactgaccatcgcc
agacagacagtctcctctatactggacacactgggagacgacgacttcttcaacatcatc
gcttacaatcaagagattcactatgtggagccttgtctgaatggtacactggtacgagca
gacagaaacaataaagctcattttagagaacatctggacaagctgtttgccaaagggatt
ggtctgctgggtgatgctcttaccgaagcattcaccattctaagtgattttaaccagact
gggcatggcagtgtgtgtagccaggccatcatgcttgtgactgacggggccacacagatg
tacgacgatgttttcgccaagttcaactggccagacagaaaggtgcgcatattcccttac
ctgattggccgagagtctgcctttgctgataacatgaaatggatggcctgtgctaataaa
gggtatttcagtcagatctccacactggctgatgtacaggaaaatgtgatgaggtatctt
catgttatgagtcgtcctaaagtcatcgatcatgaacatgacacggtctggacagaggcc
tacatggacagcactgggagtatcatactctcccaggcacacaagtccagaaacaagaag
ggccccagcctgatgaccactgtggccatgcctgtgttcagcaccaagaacgagacgaag
aaccagggtattctcctaggggtagtgggcacggacattcccctacaggaacttatgaag
atcatccctaaacacctgctgggtatccacggttacgcgtttgccatcactaacaacggc
tacatcctgacccatccagacctgaggccactgtaccagaagggccagaagaggaggaaa
cccaactatagcagtgtggacctgtctgaggtggagtgggaggacaaggatgactttctg
cgtaatgccatggtcaacaggaagacggggactttctccatggaagtgaagaagacagtg
gacaaagggaaacgtctgctgaagatgcacaatgactactactacactgaggtcaaggga
actcccttcagtgtcggtgtggctttgtccagaggccatggcaaattcttcttcagagga
aacgtctccgtagaagcagggcttcatgacctggaacagccagatgttgcgctggcagat
gaatggacgtactgcaacacagacgagtactatgagcaccgttctctctcccagatccag
gctattaaactctacctgaccggacgcaaaccactcatcaaatgtgacagggagctgatc
caggaggttctgtttgatgctgtggtcacagccccactggaggcctactggacaggcctg
gccctcaacaagtcagagaattcagataaaggtgtggagattgcttacctgggcacacgc
actggcctctctagaaccaacctgtttgttgtgcaagaggatctatccaatcaagacttc
ctgacagcggaggataaggagggggtgtttaacgctgaccacttccctctgtggtataag
agagcagcagagcaggtccctggcacctttgtctactccatcccctttggaggaaatgag
aataagagtgtggttttagccagcaccgccatacagctgctggatgacaggaagtcaccc
attgttgcatccgttgggattcaaatgaacttgaatttctttcagaggaagttctggacc
gctagcagacagtgtgctgctctggatgggaagtgcacaatcagctgtgataatgaggac
atcaagtgttacctcatagacaacaacggctttattctggtcacagaagactactctcag
acaggggagttctttggcgaggtggaggctgctgttatgaccaagctgctcctcattggc
tccttcaagaggatcaatctgtatgactaccaggctctctgtagagagtatgccggcagc
agtgacagtggacactgtttatcacatcccttctccattgtgaaatggctcctgactgaa
ctagtaatgttcctgctggaattcaacctgtacagctggtggcatgttgacctctctgtc
aaagcccagaactcgaggggaaagaccatgttggtgccatgtgatactgagtaccctgcc
tttgtctcggagcgtaccatcaaagagaccacgggcaacattgactgtgagggctgtgtc
agatcttttgttattcagcagattcccagcagtaacctattcatggttgtcgtggacaac
aagtgtgactgtagctccacccttccagtttccatggaccccattgagattatgtacaac
gaatctctgaaatgtgataggctgaagtttcagaaggacaggaagcggccagaatcatgt
catcctttccaccctgaggagaatgccatggagtgtggaggagcagcaggcctgtctgcc
ccaatcacaggagcactgctctccctgctggccactctcttcaccagatga
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