Oncorhynchus gorbuscha (pink salmon): 124019040
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Entry
124019040 CDS
T07892
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124019040 (toporsa)
03036 Chromosome and associated proteins [BR:
ogo03036
]
124019040 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ogo03037
]
124019040 (toporsa)
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124019040 (toporsa)
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124019040 (toporsa)
UBL E3 ligases
124019040 (toporsa)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
124019040 (toporsa)
Cilium and associated proteins [BR:
ogo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124019040 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
124019040
NCBI-ProteinID:
XP_046190354
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MAAAKMTLRLRKKSALDKSSEVLSAEASPDSKCPICLDRFNNMAYLDLCLHKFCFRCIHE
WSKNKAECPLCKQPFNSIYHSIQSEKDFKKYDLRPTENGSFGSFAGERFRYRTTLTGARR
QDQRRTSPPPDNGVMFEALTGASPPPRQDRGLRRMMARLAARRRAESEGRTVRSLREQEM
IKFRRALYRRGVRVRSVRDGGRSRDISAEFFQKNPACLHRLLPWLKRELVVLYGAHGSLV
NIVQHIIMSRITRYDMEDRAIHEELQPFLQARTDHFLHEFVNFARAPFNMEAYDQHAVYD
CPAPSSDEGSSSNSSVIAISEDEEEGDSVELDPMSGGALSQSTWDDETPGPSYSTTEPTR
ALLLSIRDSDSESSVGEECGAVLQPKAHRLTVDSAWVKTDKDGQVCTSSGDEDCIIVGFV
KPLAERTPELVKLSSDSEESVLEEIKDEVPRLLQHIRFTSLSPTSSQGQCPGKAEGVERK
QDVSCSKERRNTSPSIRCETASSKSASKNRGQTEKDGRRCHSRDRSRERPRSRSRDRGRR
SRSADRSRSTKSPAISINSDSTLSRGRRQSRSQSRDCSHTKWEKTRDNKDSSRSGRSHDS
SSHSYHWHYYSRESEKDSSATLYTERRSYYSSSHRNIDCRSPSQSPDSHRRDKRSSRSRS
STCSPSGAHRKSRHEKPSGKRKYKSRHLEEPAPKDQSSKALDEPPSSTTSSYVKDKKKSK
EKRHRKSKEKSGGKRSRSLSVEIIFEGSSSEQTRKHQKKKKKHKKKGKRHRSKERTGSRK
YSPTVITIDSDSDQHTAAGANDANHTCPVSSSTSNSVLAPSTTTTTGNPADSGLLESMLQ
DWEQQIPPVGLDSGVLEAKPPINVAATSDTPTHSEGVLSQSASADEANSHSPSNDNTSHF
LEES
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcaaagatgaccttacggctacgcaagaagagtgccctggacaagtcctct
gaggttttgtctgccgaggcgtctccagactctaagtgcccgatctgtctggaccgattc
aacaacatggcctaccttgatctctgcttgcacaagttctgcttccgctgcatccacgag
tggtccaagaacaaagccgagtgcccgctatgcaagcagccattcaactctatctatcac
agtatacaatcagagaaggacttcaagaagtatgacctgcggcccacggagaacggttcc
tttgggagtttcgcaggggaacggttccgctaccgcaccacgctgacgggggcgcgtcgg
caggaccagagaagaacatcccctccccccgacaacggggtcatgttcgaggccctaacg
ggggcttccccccctcctcgacaggaccgaggcctccgccgcatgatggcgcgcctggcg
gccaggaggcgggcagaaagcgagggccggaccgtgcgcagcctccgtgagcaggagatg
atcaagttcagacgggcgctctaccggcgaggggtgcgagtgcggagcgtgcgagatggt
ggtcgttcccgggacatctcggcggagttctttcagaagaacccggcctgcctgcaccgc
ctgttgccctggctgaagagagagctggtggtgctgtacggcgctcatggctccctggtc
aacatcgtgcagcacattatcatgtcccgcatcacccgctatgacatggaggaccgggcc
atccacgaggagctgcagcccttcctccaggcccgcaccgatcacttcctgcatgagttt
gtcaacttcgcccgagcacccttcaacatggaggcctacgaccagcatgccgtctacgac
tgccctgcgccgtcctcggacgagggcagcagctccaactcctcggtgattgccatctcc
gaggatgaggaggagggcgattctgtggagctggaccccatgtccgggggtgccctgagc
cagtcaacatgggacgacgagacacccggaccttcgtactccacaacagaacccaccagg
gccctcctgctatccatcagagactcggactcagagagcagtgtgggggaggagtgtgga
gcagtgttacagccaaaggcccatcgcctgactgtggactctgcttgggtgaaaaccgac
aaggacggacaggtgtgtacctcctctggcgatgaggattgcatcatcgtgggctttgta
aaaccccttgctgaaaggactccggagctggtcaagctgtcctctgactcagaggagtct
gttctggaggagatcaaagatgaagtgcccaggctgcttcaacacatccgcttcaccagc
cttagccccacctcctctcaaggccaatgtcctgggaaggcagagggggtggaaaggaaa
caagatgtatcgtgctccaaggagagacgtaacacctcaccctcaattagatgtgagaca
gcatccagtaagtcagcaagcaaaaacagaggacaaactgagaaagacggcaggagatgt
cacagtcgagatagatctagagagaggccacggtcgagaagcagagaccgggggaggagg
tccaggagcgccgaccgcagccgctcgaccaagagcccggctatctccatcaacagcgac
agcactctgtccagaggcaggaggcagtcacgctcccaaagccgcgactgctcccacact
aaatgggagaagacgagggacaataaagatagcagccgatcaggccgcagccacgactca
tcgtcgcactcctatcactggcactactacagccgggagagtgagaaggacagcagtgcc
acgctctacacagagaggaggtcctactactccagctcacacaggaacatcgattgcagg
tccccgagccagagtcctgattcccaccggcgggataagaggagctccagaagtcgttcc
agcacctgttcgccgtccggcgctcacaggaaatctcgtcacgagaagcccagcgggaag
agaaagtacaaatcgagacacctggaggaacctgcccccaaagaccagtcctccaaagcc
ctcgacgagcctccctcctccaccacctcgtcctatgtgaaagacaagaagaagagcaaa
gagaagcgtcacaggaagtccaaggagaagtctggggggaagaggagcaggagcctcagc
gtggagatcatctttgagggcagctcctcggagcaaaccaggaagcaccagaagaagaag
aagaagcacaagaagaagggcaagaggcacaggagcaaagagcgcacagggtccaggaaa
tactcgcccactgtcatcaccatagacagcgacagtgaccaacatactgccgcaggcgct
aacgatgctaaccacacctgcccggtaagcagcagcacaagcaacagcgtgctagcgcct
agcacaaccaccaccacaggcaaccctgcagactctggcctgctggagtccatgttacaa
gactgggaacagcagattccacctgtgggtctggacagtggagtgctggaggccaagcct
cctataaatgttgctgctacttctgacacacccacacatagtgagggggttctgtcccaa
tctgcctctgcggatgaggcgaactctcatagcccttcaaatgacaacacaagtcatttt
ttggaagaatcataa
DBGET
integrated database retrieval system
