Oncorhynchus gorbuscha (pink salmon): 124019082
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Entry
124019082 CDS
T07892
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1-like
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124019082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogo03009
]
124019082
03016 Transfer RNA biogenesis [BR:
ogo03016
]
124019082
03029 Mitochondrial biogenesis [BR:
ogo03029
]
124019082
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
124019082
Ribosome biogenesis [BR:
ogo03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
124019082
Transfer RNA biogenesis [BR:
ogo03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
124019082
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
124019082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
eIF3_p135
Motif
Other DBs
NCBI-GeneID:
124019082
NCBI-ProteinID:
XP_046190399
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MSFKELSNMSTAKHRMRDKKMRNQPINVTYSSQGSSHWRNGGDTPTGRGHDLSPHPWGQG
SSHSGHAQRGGWVRGHQREGHGGYPQAMPTHITASAFAKARAAEVNAMLMAVTKTTGSSH
VFGALPKHMRRRAMSHNTKRLPCRLRHMANNMLEKSQKAGQKVKKEQSKSKSRKARRRHG
NMLLEFNRRQRKNLWLETHIWHAKRFHVVKRWGYCLGDRPTYKCYRACYRAMSSHCLLQD
MSYYCCVELQGPGEQLLAALSKLTSKETGPTFAAAMCVSGRRQGSVVVYRAGQYPLQPLG
PVTFLWRPTTQGRGGQEDQGSQGSTHRQLWIWAHPTMKTDLLPELQAVCQCSEAVLPPAP
VDLPVPQPAPTPTLAPGPGAGPEVVQASGSGSKRKWSSREPEAAGPPAKKLLGYSTISAT
TPVTWRSSTTGIVISDLTMEMVRYRLIGPLSHSVLTETLAPATHCDAPGKSRPSPFWWPD
HCRDDCNMSLHQQQAGVFNMLKGVYSTAEVPAGSVLGLTVDDPRLTLPNKRSKAVSDIRK
AQGVNGREFPVGPGSATGTANKMTDQEVNRLRNDVLVPGSRLPTPLQGRVPVLLVQQSGK
SQGTEMGSWGAGWDLLLPKAWGMAFWVPLVYRGVRIGGLRMSLKHAQNKGEPHFPHDYPD
CPAGARFQEEQEAELLAKFRRRPPAKRTNYIKHGCLAPFRCPWQQLVEEWELIVKEEGGG
GGEEAVASMEQEVKPPQSNFTVLRNRKSLRQLSAWCRPTSSKYQRSRNPGSTPQLNRNVA
ASLLSAHGGSSLVWIRLSLVAKGQPEQHALVCVPTAEDLQLVREEPGCTGPQEPLHTDHF
KSRVKRPRKKDHNKPGTSSSSSAKQSDPASVPGVNPGPDPGSSSSLTNPDPSSSSSLTNP
SSSCTSSLTLGLWPEPLPSVTSHCSRVTLGWVTQGDFSLSAGCGEALGLLSLTGLLHTLL
RQPDGQRGLVLLRNPGSLQYRFAKINIEV
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcaaagagctatcaaacatgtctacagccaagcacaggatgcgcgataagaag
atgaggaaccagccgatcaacgtcacctattcctcccagggcagctcacactggaggaac
ggaggggacaccccaacaggtcgaggccatgatctgtctccacatccatggggccagggg
tcctcccactctggccatgcccagagagggggctgggtccggggccaccagagagaagga
cacgggggatacccgcaggctatgcccacacacatcactgcctcagcgtttgccaaggcc
cgggctgcggaggtgaacgccatgttgatggccgtcaccaagacaacaggcagctcccat
gtgtttggagctcttcctaaacacatgaggaggagggccatgagccataacaccaagaga
ctgccctgcaggctgagacacatggccaacaacatgttggagaagagtcagaaggctggt
cagaaggtgaagaaggaacagtccaagagtaagagccgtaaagcccggcgtcgccacggc
aacatgctcctggagttcaaccgccgccagcggaagaacctgtggctggagactcacatc
tggcacgccaagcgcttccacgtggtcaagagatggggctactgtctgggagacaggcca
acctacaagtgttacagagcctgctacagagccatgagctcccactgtctcctacaggac
atgtcgtactactgctgtgtggagttacaggggccaggggaacagctgttagctgctctg
tctaagctgaccagcaaggaaactgggcctacgtttgcagcagccatgtgtgtttcaggc
aggagacagggcagtgtggtggtgtaccgagcaggacagtaccctctccagcccctgggg
cctgtcacattcctctggaggcccacaacgcagggccgggggggccaggaggaccagggc
tcccagggatcaacacacagacagctgtggatctgggctcaccccaccatgaaaacggac
ctcctcccagagctgcaggctgtctgtcagtgttctgaggctgtccttccacctgctcca
gtggacctccctgtcccacagccagcccctacccccaccttggcccccggtcctggggct
ggtcctgaggtggtgcaggcctctggttctggttctaagaggaagtggtcgtccagggag
cctgaggctgctggaccaccagccaagaagctcctgggatacagtaccatttctgctacg
acacccgtaacctggaggtccagtaccactggtatagtcatcagtgacctcaccatggag
atggtgcggtatcgtctgattggacctctatcacattccgttctgactgaaaccctggcc
cctgccacacactgtgatgctccaggtaaatccagaccatctcccttctggtggccagat
cactgcagagacgactgtaacatgtctcttcatcaacaacaagctggtgtcttcaacatg
ctcaaaggtgtgtactccacagcagaggttccagccggctcagttctgggtctgacggtg
gatgaccccagattgaccttaccaaacaagagaagcaaggccgtgtccgacatcaggaag
gcacaaggagtgaacgggagagagttccctgtgggaccggggtccgcgacaggcacagcg
aacaagatgacagaccaggaagtaaacagactgcgtaatgatgttctggtcccaggctcc
agactccccacccccctgcagggtagagtacccgtcctactggtgcagcagtctgggaag
agccagggcacagagatggggtcctggggggcgggatgggacctgctgctacccaaggcc
tggggcatggccttctgggtccctctggtttatagaggagtacgtatcggagggctgagg
atgagtctgaaacacgcccagaataaaggagagcctcactttccccacgactacccagac
tgccctgcaggagcacgcttccaggaagagcaggaggctgagctgctggccaagttcagg
aggcgcccgccagccaaacggaccaattacatcaaacatggctgcctggctccgttccgt
tgtccctggcaacagctggtcgaggagtgggagctgatcgtgaaggaggaaggaggagga
ggaggagaggaggcggtcgcatcaatggaacaggaagtgaaaccaccacagagtaacttc
acagtcttgaggaacaggaagtctctaaggcagctgtccgcttggtgtcgccccacatcc
tctaaatatcagaggtcacgtaacccgggatcaacaccacaactcaaccgtaacgttgca
gcgtctctcctctcggcacacggtggcagcagcctggtgtggatccgtctctccctcgtc
gccaagggccaaccggagcagcacgccctggtgtgtgtccccaccgcagaggacctccag
ctggtacgtgaggagccgggctgcacagggccccaggagcctctacacactgaccacttc
aagagccgcgtcaaacggccacgcaagaaggaccacaacaaacctggaacctcctcctct
tcctccgccaagcagtctgaccctgcctcagtccctggtgtcaaccctggtcctgatcct
ggctcctcttccagcctcaccaaccctgatcctagctcctcctccagcctcaccaacccc
tcttcctcctgtacctcatccctgactctgggtctctggccggagccccttcccagcgtc
acctcccactgctccagggtgactctgggctgggtgacccagggggacttctccctgtcg
gctggctgtggagaggctctggggctcctcagccttactggtctcctacacaccctgctc
agacagcctgacggccagagaggactggtgctgctacggaaccccggatcactgcaatac
cgtttcgctaagatcaacatagaggtctga
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