Oncorhynchus gorbuscha (pink salmon): 124019095
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Entry
124019095 CDS
T07892
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo02010
ABC transporters
ogo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124019095
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124019095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogo02000
]
124019095
Transporters [BR:
ogo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
124019095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
124019095
NCBI-ProteinID:
XP_046190413
LinkDB
All DBs
Position
Unknown
AA seq
2283 aa
AA seq
DB search
MAISTQLGLLLWKNFTYRRRQTLQLIIEIIWPLFIFFILISVRMHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRHPTPGESPGLVGNFNDSIISRLFIDAKKILLYSQNDK
SFEGYKVLVRALGKLQSNTAGFKLKDFLRDKETLSSFLHRNASLSHHAVQQIVEADLNLE
KVLIGGFGVHLRDMCNTTSLEEFVTISDKNVSRLTQDIICKASPDWLNKAQDHFLSNLDF
LKPIRKDVKSDPEVVQKVSAATDGLLESLGALAVELASMKSWKEMRNEILYLTANATGSP
SHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNRGGNGSDDEPVSAYDNTSTPY
CNSMMRSLEASPVSRMIWRALKPLLMGKILYTPDTPATQRIIHEMNKTFQELGILRDLGG
MWEEMRPKIWTFIESSEEMNLVRTLLQNNASARFFNDRLAGTEWKVEDVSRFLTKAAEDK
RPAGSAYTWREVFGETDDAIKTISRFMECVNLDKLEPVANEERLVNKSMGLLDNQKFWAG
IVFPDIARSNSSDLPGNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFS
YLQDVIEQGIIRAVTGSQEKTGVYIQQMPYPCYVDDMFLRVMSRSMPLFMTLAWMYSVAL
IIKGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISASLLVVILKMGNLLPYSD
PCVVFLFLASFAVVTIMQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFG
AKVIVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPLEEDSYSLTTSICLMLFDSFL
YGVMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKQGKNIQERKEGNAEAVCIEEEPSHI
EPGVYIKNLVKVYSHGNKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYILGKDIRSELSAIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKAEMEQI
VNDIGLPHKRQCRSNTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLL
KYRAGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDFD
LTLSSCRNSSSSSSVSYSKKVGLPQPQPQALTVLKEDSVSESSSDAGLGSEPESEATTID
VTMISNVIFKHVPAARLVEDLGHELTYVLPYKAAKGGALVELFHEIDDRLSDLGISSYGI
SDTTLEEIFLKVAEDSGVDVAELPNSDGTIPARRHRRHAFGDHQSCLKPFNEDDAFDFND
SEGDPESRETDWLGGSDGKGSYQVKGWRLIRQQFVALIWKRFLYARRSRKGFFAQIVLPA
VFVCIALVFSLIVPPFGKYPSLELEPGMYEEQFTFISNDAPEDADTNKLLGALTNYDGFG
SRCNSPHAPCNTLDDEWVVPEVPESVRDIFMNGNWSMENPSPLCECSCEGRKKMLPECPA
GAGGLPPPQVKISDQGTLQNLTGRNISDYLVKTYAQIIGKSLKNKISVNEFRYGGFSLGA
RNTQLLPPGDDIDQAISEIRRRFHLERGTAADRFLASLSSFIQGLDTKNNVKIWFNNKGW
HSIGSFLNVMNNGILRASLPAGQDPSKYGIQAFNHPLNLTKEQLSQVALMTTSVDVLVSI
CVIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPFLYWLSNFIWDMCNYIVPATLVII
IFICFQQDAYVSSTNLPVLALLLLFYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGI
NGSVSTFVLELFGSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENR
FRSPLAWDMVGKNLFAMAVQGVVFFTITVLIQYRFCIKARSMSTDQKPIGEEDEDVARER
QRILGGGGQSDILELKQLTKVYNRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKML
TGDSIVTSGEAYLAGKSVLTEINEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEK
EVCEVAEWGIRKLGLIKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKA
RRALWNCILSIVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGY
TIILRVAGPDPDLRPVMEFIEKELPGSTLKEKHRNMLQYQLSSSKTSLARIFSILAKNKE
WLHIEDYSVSQTTLDQVFVNFAKDQSDEDHLKDISMHKRDAVAVDITQLKSFLTDEKARE
SCV
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atggccatctctactcaactgggcttactgctgtggaagaacttcacctacagacggaga
cagacactccagctaattatcgagataatatggccgctcttcatcttcttcatcctcata
tctgtgaggatgcattacccgccgtatgagcaacatgagtgccatttccccaacaaggcc
atgccctcggcgggcaccttgccctgggtacaagggatcatctgtaacgccaacaacccc
tgcttccgccaccccacaccaggagagagcccagggctggtgggcaacttcaacgattct
ataatctcccgtctgttcatcgatgccaagaagatcctcctctacagccagaatgacaag
agcttcgagggctacaaagttctggtgcgggctctggggaaacttcagagcaacacggca
ggtttcaagctgaaggactttctccgtgataaggagaccttatcgtcgttcctgcatcgc
aacgcctccctatcccatcacgccgtccagcagattgtcgaggctgacctcaacctagag
aaggtcctgattggaggtttcggcgtccatcttagagatatgtgtaacaccacttctctg
gaggagtttgtgaccatctccgacaagaatgtgtcacggctcactcaagatatcatctgc
aaggcctcccctgattggctgaacaaggcccaggaccacttcctgtccaacctggacttc
ctgaaacccatacggaaggacgtgaagtccgaccctgaggtcgtccagaaggtatccgcg
gcaaccgacggtctgctggagagcttgggagcgctggctgtagagctggccagtatgaag
agttggaaggagatgcgtaacgagatcctttacctgacggccaacgccacgggctccccc
agccacatgtaccaggccgtgtcccgtatcgtctgtggccaccccgagggcggcggactg
aagatcaagtcgctcaactggtacgaggacaacaactacaaggccctgttcggtaaccgc
ggcggcaacggcagcgacgacgaacccgtgtccgcctacgacaacacctcaactccgtac
tgcaacagcatgatgaggagtctggaagccagccccgtctccaggatgatctggagggcc
ctgaagcctctcctcatgggaaagatcctgtacacccccgacactcccgccacacagagg
atcatacacgagatgaacaagacgttccaggagctgggtatcctgagggacctgggtggg
atgtgggaggagatgaggcctaaaatctggaccttcattgagagcagtgaggagatgaac
ctggttcggacgctgcttcagaacaacgccagtgcccgcttcttcaacgaccgtctggct
ggcaccgagtggaaggtggaggacgtgtcccgcttcctgaccaaggccgcggaggacaaa
cgccccgccggctcggcctacacctggagagaggtgttcggcgagaccgacgacgctatc
aagaccatctcccgctttatggagtgtgtgaacctggataaactagagccagtggccaat
gaggaaagactggtcaacaaatccatgggtctcctagacaaccagaagttctgggctggg
atagtgtttccggacatcgcccgtagcaacagttctgacctgccgggtaacgtcaactac
aagatccgcatggacatcgacaacgtggagcgcaccaacaagatcaaggacggttactgg
gaccctggtccccgggcggacccctttgaggacctgcgctacatctggggcggtttctcc
tacctgcaggacgttattgaacagggcatcatcagggcagtgacgggcagtcaagagaag
actggagtttacatccaacagatgccttacccctgctacgtagacgatatgttcctgcgg
gtgatgagtcgctccatgcctctcttcatgaccctggcctggatgtactctgtggccctc
atcatcaagggcgtggtctatgagaaggaggcgcggctcaaagagaccatgaggatcatg
ggattggacaacggcatcctgtggctcagctggttcatcagcagcctcatccccctgctc
atctccgcctcgctgctggtggtcattctcaagatggggaacctgcttccctacagcgac
ccttgcgtggtcttcctgttcctggcttcctttgctgtggtaaccatcatgcagtgcttc
ctcatcagtaccatcttctcccgtgccaacctggcggcggcctgcggaggaatcatctac
ttcaccctctacctgccctacgtcctctgtgtggcctggcaggactacgtgggtttcggg
gctaaagtcattgtgagcctgttgtccccggtggcgtttgggttcggctgtgagtacttt
gccctgtttgaggagcagggagtgggtatccagtggtccaacctgttgtccagccccttg
gaggaggacagctactccctcaccacctccatctgtctcatgctgtttgactccttcctc
tacggggtcatgacctggtacatcgaggctgtcttccctggccagtatgggatccccaga
ccctggtacttccccttcaccaagtcctactggtgtggagagaaacaagggaagaacata
caagaaagaaaggaaggaaatgcggaagctgtgtgcatcgaagaggagccgtctcacatc
gagcctggtgtttacatcaagaacctagtgaaggtgtatagccatggcaacaagttggct
gtagatgggttgaccctgggcttctacgaggggcagatcacctctttcctggggcacaac
ggagctggcaagaccaccaccatgtccatcctgacgggtctgttcccgcccacctctggc
accgcctacatcctgggcaaggacatccgctcggagctcagcgccatccgacagaacctg
ggcgtctgcccgcagcacaacgttctcttcagcatgctgacggtggaggagcacatctgg
ttctatgcccgtctgaagggtctgtctgaggagaaggtgaaggctgagatggagcagatc
gtcaacgacatcggcctgcctcacaaacgccagtgtcgtagcaacacgctgtccggggga
atgcagaggaaactgtcagtggcgttggcattcgttggagggtcaaaggttgtgatcctg
gatgaacccactgctggagtcgacccctacgcacgccggggaatttgggacctgcttctg
aagtatcgtgccggccgcaccatcatcctctcaactcaccacatggacgaggcggacatc
ttgggcgaccgcatcgccatcatctcccacggcaagctgtgctgcgtgggctcctccctg
ttcctgaagacccagctggggacgggctactacctgaccctggtgaagagagacttcgac
ctgaccctcagctcctgtcggaactcctccagcagcagctctgtctcctacagcaagaag
gtgggcctccctcagccgcaaccccaggccctcacagtcctaaaggaggacagtgtttcc
gagagcagctctgacgctggactgggtagtgaaccggagagtgaagccaccactattgac
gtaaccatgatctctaatgtgatcttcaagcacgtccccgctgccaggctggttgaggac
ctgggccatgaactcacctacgttctgccctacaaggcggccaaaggtggagccctcgtg
gagctcttccacgagatcgacgaccgcctctctgacctcggcatctccagctacggcatc
tcagacaccaccctggaagagattttcctgaaagtagcagaagacagtggagtggatgtt
gctgaacttcccaactctgatggcaccatcccggctcgtaggcaccgcagacatgcattc
ggagaccaccagagctgtctgaaacccttcaacgaggacgacgctttcgacttcaacgac
tcagaaggtgacccagaatctcgtgagacggactggctgggaggctcggatggaaaaggc
tcgtaccaggtcaaaggctggcgtctgattagacagcagtttgtggcgttgatatggaaa
cgcttcctgtatgcccggcggtccaggaaaggcttcttcgctcagatcgtgcttcctgct
gtgtttgtgtgcatcgccctcgtcttcagtctcatcgtccctccgtttggaaagtacccc
agcctggagctggagcctggcatgtatgaagaacagttcaccttcatcagcaacgacgcc
cctgaggatgcagacacgaacaagctgttgggtgccctgacaaactacgatggctttggt
tcacgctgtaactcaccccatgctccttgcaacacgttggatgatgagtgggttgttcct
gaggtaccggagagtgtgagggacatctttatgaatggcaactggagtatggaaaacccc
tctcctctctgtgagtgcagctgtgaaggacgcaagaagatgctacctgaatgcccagcg
ggagctggtggtcttcctcctccacaggtgaaaatcagtgaccaaggtaccctgcaaaat
ctgactggcagaaatatctcagattacctggttaaaacctatgctcagattatcgggaaa
agtttgaagaacaaaatctcggtcaatgaattcagatatggcggattctcattgggtgct
aggaacactcagctcctcccaccaggtgatgatattgatcaggccatctctgagatcaga
cgacgcttccacctggaaagagggactgctgctgaccgtttcctcgctagcttatcaagt
tttatccagggactggacactaagaacaacgtcaagatctggttcaacaacaaggggtgg
cacagcatcggttctttcctgaatgtgatgaacaacggaatcctgcgtgccagcctgccc
gcgggccaggaccccagcaagtatggcatccaggccttcaaccacccactcaacctcacc
aaggagcaactgtcccaggtcgcactgatgaccacctctgtggacgtgctggtgtccatc
tgcgtgatcttcgccatgtctttcgtcccggccagcttcgtagtcttcctcattcaggag
agagtcaacaaggccaaacacatgcagttcatcagtggagtgcagcccttcctctattgg
ctgtccaacttcatctgggacatgtgtaactacatcgtccctgctactctggtcattatc
atcttcatctgtttccaacaagacgcctatgtctcctccaccaacctgcctgtactggcc
ctgctgctgctgttctatgggtggtccatcacgcccctgatgtacccggcgtccttcttc
tttaagatccccagcacggcctacgtggtgctcacctccgtcaacatcctcatcggcatc
aacggcagcgtctccaccttcgtcctcgagctcttcggcagcaacgagatcggagggatc
aacgacatcctgaagaatgtgttcctgatcttccctcacttctgtctgggtcgaggcctc
atcgacatggtgaagaaccaggccatggccgacgctctggagaggtttggtgagaaccgg
ttccgttcccctctggcgtgggacatggtgggcaagaacctgttcgccatggctgtgcag
ggtgtggtcttcttcacgatcaccgtgctcatccaataccgcttctgtatcaaggccaga
tctatgagcaccgaccagaaacctattggtgaagaggatgaagacgtggccagagagagg
caaaggattctgggaggagggggacagtctgacattctggaactcaagcagctgaccaag
gtgtacaatagaaaacagaaaccagcagtggatcgtctttgtgtcggaattcctccagga
gagtgttttggtcttcttggagtcaacggagcaggaaagacgagcaccttcaagatgctg
actggagactccatagtcacgagtggtgaagcttacctggcgggaaagagtgtgttgacg
gagatcaacgaggtgcaccagaacatgggctactgccctcagtttgatgctatcaacgac
ctgctgactggcagggagcacctggagttctacgccatcctgaggggggttcccgagaag
gaagtgtgtgaggtggcagagtggggcatccgtaaactaggcctgatcaagtatgtggac
aaggcagcagggagctacagtggagggaacatgaggaaactctccacggccatggcactg
atcggtggtccaccagtggtcttcctggacgagcccaccactggtatggaccccaaggcc
agacgggctctgtggaactgcattctcagtatcgtcaaggagggacgatcggtggttctc
acctcgcacagtatggaggagtgtgaggccctgtgtacgcggatggccatcatggtcaat
gggaggttccgctgcctgggcagcgtacagcacttaaagaacagatttggcgatggctac
accatcatcctccgggtggcaggacctgacccggacctgaggccagtgatggagttcatt
gagaaggagcttccaggcagcactctgaaggagaagcacaggaacatgctgcagtatcag
ctgtcctcctccaaaacctccctggcacgcatcttcagcatcctggccaagaacaaggag
tggctgcacattgaggactactccgtttcccagacaacactagaccaagtatttgtcaat
ttcgccaaggaccaaagtgacgaggaccacttaaaagacatttcgatgcacaagagagac
gcggtggcagtggacattactcagctcaagtctttcctcacagacgagaaggccagggag
agctgcgtgtga
DBGET
integrated database retrieval system
