Oncorhynchus gorbuscha (pink salmon): 124019654
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Entry
124019654 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: fibronectin-like
KO
K05717
fibronectin 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04512
ECM-receptor interaction
ogo04810
Regulation of actin cytoskeleton
ogo04820
Cytoskeleton in muscle cells
ogo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124019654
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124019654
09142 Cell motility
04820 Cytoskeleton in muscle cells
124019654
04810 Regulation of actin cytoskeleton
124019654
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124019654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124019654
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124019654
00536 Glycosaminoglycan binding proteins [BR:
ogo00536
]
124019654
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124019654
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
124019654
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
124019654
Glycosaminoglycan binding proteins [BR:
ogo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124019654
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
124019654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
fn2
Interfer-bind
NDNF
FN3_Tor_3rd
Arylsulfotran_N
Y_Y_Y
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
124019654
NCBI-ProteinID:
XP_046191011
LinkDB
All DBs
Position
Unknown
AA seq
2484 aa
AA seq
DB search
MTGSPVTGLLVALCVSSAVHCMPKNQGKNKRQTQEQVYPELADTVPLAQGCDENGHSYRL
NDQWEKAYRGSTLLCTCNGAAGIKCKTKPQGEETCYDKYNDQTYPVGATYERAKDGMMWD
CTCIGSARGKISCTIGNRCHEGGRSYKIGDTWRRPHETGDYMLDCVCLGNGKGEWTCKPV
SERCYDNTGGASYVVGQTWEKPYQGWMMIDCTCLGEGNGRITCTSRNRCNDQDTKTSYRI
GDTWTKTDANRHQLQCLCTGNGRGEWKCERHSATTGTGVSTGTGVGTALHPPPNPQEGAC
RTDSGATFHVGMRWIRTQGSKQMLCTCQGTGAVSCEEKEGQSQVYGGNSEGQACVFPFVF
MDKTYYSCTSEGRTDGQLWCSTTSDYHRDQQYSYCTEKNSLVSTRGGNSNGALCQFPFLY
NGRNYTDCTADGRRDGMRWCGTTTNYEGEQRYGFCPMAAHEEACTTNDGVMYRVGDQWDK
RHDVLGHMMQCTCLGNNRGEWSCIAYSQLKDQCIVDGLTYEVSQTFTKLHDQGYMMNCTC
YGQGRGRWKCDAIDQCQEPESRAFYQIGETWDKTIHQVLYRCYCYGNGIGEMSCEPQQTF
PGGHRPVQVIITEAGKQPDSHPIQWNAPASSHITQYILKWRVKNTRAPWREATIPGNLNS
YTIAGLRPGITYEGQLISILRYGRREVTRFDFTTTYGSLGVTSEGETTQPPPVVDTSESV
TEITSSSFIISWVSASDTVSGFRVEYELSENGAKPQVLDLPRTTTSVSISDLLPGRRYNV
NVYEVSPQGEPTLILTTSQTTAPDAPAEHQINQVGETSISISWSKPQAPITGYRLVFTPS
VEGSSTELILPDTETSVTLVDLQPGLLYNISIYAVEENQESEPIFVQVNTAGEPAPEEVR
SPTDLQFYEVSDVKIIITWTGPPSEVSGYRVTYAPVTPGDTPQRPLQLPMTANAYAEITH
LQPGTLYRFNIYAINGGVESEPLTGERATKPDAPTNLRFTDIGEDGVIMIWEAPRASISG
YRLFLSVEGSSPTQKRIPGGQTQFPLRGLRPDTDYTVKLHSEQDNVLSEEVNGIFTTCDP
KDGXCPRFTTDVTDTSIIISWTPVSRFSFRLSVRPSQGGESPREVTSDSGSIFVSGLTPG
TEYTYSVQPIINGRDRGNPITKNVVTQLSPPTDLSTQSNADTGELTVLWGGANTPDITGY
RVTCTPTNGQRGNSLEELVQPVQNQLILENLSPGVEYNVSVYTVKDNLESVPVSTTVTQD
VPKLNDLDFVDVTDTTVGLRWTALVNVSAITSYRVTVMASGESLPIIMDTVDSSTGHYTV
RGLEPGVDYDISVTTITEEGESEPATRRTQTQTAVPAPTNLNFGGVGPDHMRVSWTVPNV
PTPSDITRFVIRFHPSSNDDDVKELNVGGATNTFLLQNLLPNTEYRVSVVCVYEERESAP
VTGTQRTTLDSPTGLDFADVLTNSFTIHWLAPSAVITGYRIHYQMTSGGRAKDERLPPTR
SHFTLTGLAPETEYSVEVYAVSGNQESLPLTGTQATISDAPTDLEVTSTSPTSITIRWDA
PSVTVRYYRITHGETGGESPAKEFTVPGSQSEATISNLNPGTDYTITVYAVTGRGDSPAS
STPIYVSHKTDVEGPTNMDVTDVKDNTITVRWSAAQGPIKGYRVTSVPKNGQGPSFSEVV
APDQTEITFTGLMPTVEYVLSVTALGTDGEPSTPLVENAITAMDHPKALSFSEVDSTSLR
ITWDSPDGTVTSYRVLYSSPEEGERELRPAPRGTDDTVVLRNLRPGTEYTVKVIALHGRT
PSTPLVGTQATAIPAPTNLDISEVGDTSFIVSWRSPXSGLSGYRVVVNPKNNNGPTKEMT
IAPDTTRAVVPGLMVATLYTVHVYALKNSVTSRPLEGEVTTLDNISPPRRVRISDVKDSA
ITLTWRAKVETITGYLIEAQPLGGSRPIKKTIPGEQRTYTITGLEPGTSYTIHIYTINGD
ARSAPFTLTATTAKPAVHSPTNLQFTSLTPNSISFSWEXPATRITGYYITYEEAGRAQPR
ELTPRPHAGQNYATISGLRPGTEYIIKIIALQNVQRSTPLVGTARTQRESLLTLPLPNRP
GGYDHLDVPEEKESRVPTVVGNNGLDTLGGQGQNVEYTEYNNQNPQTPYGNGQTPYGNGQ
TPYGNGQTPLVFVPLPDAEGRRVPVVSVNVPGGSPFGFPEKDTGIPQEAQTQTTIAWKPY
KQSSEYLVSCNPLTHVNEKMFQMRLPGTSTSATLIGLTSGASYNVIVEALKGALKHKILE
EIVTAGNTLTEGSTGTDKDSCYDTFTATYHDVGTEWERMSETGFKLWCRCLGLGSGHFRC
DSSKWCHDGGNNYRVGEXWERQEEKGPMMSCTCLGNGKGEFKCEPHESTCYDDGKMYQIG
NQWQKEYLGAICTCTCYGGQQGWRCENCRRPGAEVDSSLLQPVRYRDPTNTLRKVNIQCP
IECLRPELLADALAEGHIPQNPLE
NT seq
7455 nt
NT seq
+upstream
nt +downstream
nt
atgactggtagcccagtgacagggctgctggttgcgctgtgcgtaagcagcgcggtccat
tgtatgccaaagaaccaagggaaaaacaagagacaaactcaggaacaagtttaccccgaa
ctcgcagacacagtaccccttgctcaaggctgcgatgagaacggacattcttacagacta
aacgatcaatgggaaaaggcttaccgcgggagtacactgctttgtacctgcaacggagcg
gcagggatcaaatgtaaaacaaaaccccaaggggaggagacctgctatgacaaatacaat
gaccagacgtaccctgtgggtgcgacctacgagagggcgaaggacggcatgatgtgggac
tgcacctgcatcggttccgcccgcggcaaaatcagctgcacaatcggaaaccgctgccac
gagggaggcagatcctacaaaatcggggacacttggagaaggccccacgagaccggagac
tacatgctggattgcgtctgtctgggaaacggcaagggagagtggacctgcaaacccgtg
tcggagcgttgctatgacaacacaggtggagcctcctacgtggtggggcagacctgggag
aagccgtaccaaggctggatgatgatcgactgcacctgtctgggggagggcaacggacgc
atcacctgtacctctaggaaccgttgtaatgaccaggacaccaagacctcctaccgcatc
ggagacacatggaccaagacagatgctaacaggcaccaactccagtgtctgtgtacagga
aatggcagaggagagtggaagtgtgagagacactctgccactactggcacaggtgttagt
acaggaacaggtgtaggaacagccctccaccctcccccgaacccccaggagggggcttgc
cgcacggactcgggcgccaccttccacgtgggcatgcgctggatcaggacccagggcagc
aagcagatgctgtgtacctgccagggtactggcgctgtcagctgtgaggagaaggagggc
cagagccaggtgtacggtgggaactcagaaggacaggcctgtgtgttcccctttgtgttc
atggataagacctactactcctgtacctcagagggacgtactgatggacagctgtggtgc
agcaccacctctgactaccatagagaccagcagtactcctactgtaccgagaagaactcc
ctggtgtcgacccgagggggtaactccaatggtgccctgtgccagttccccttcctctac
aacgggcgtaactacactgactgtaccgccgatgggcgccgcgatggcatgaggtggtgc
ggtaccacaaccaactacgaaggggagcagcgctacggattctgccccatggctgcccac
gaggaggcctgcaccaccaacgacggggtcatgtaccgtgtgggagaccagtgggacaaa
cgccacgatgtcctgggtcacatgatgcagtgtacctgcttgggcaacaaccgcggagag
tggagctgcatcgcctactcccaactcaaagaccagtgcattgtggatgggctgacctat
gaggtgagccagaccttcaccaagctccatgaccagggctacatgatgaattgcacctgc
tatggacagggacgcgggcgctggaagtgcgacgccatcgaccagtgccaggagcctgag
agcagggcgttctatcagattggagagacctgggacaaaaccatccaccaagtcctctac
cgctgctattgctacggcaacggtattggtgagatgagctgcgagccacagcagaccttc
ccaggtggccaccgcccagtccaggtgattatcacagaggcagggaagcagcctgactcc
caccccatccagtggaacgccccagcctcctcacacatcacccagtatatcctcaagtgg
agagtgaaaaacacccgtgccccctggagagaggccaccatcccaggtaacctgaactcg
tacaccatcgctgggctgcggccaggtattacctatgagggtcagctgatcagcatcttg
cgctatggacgccgcgaggtcacccggtttgacttcaccaccacctacggctcccttggg
gtgacctctgaaggtgagacgacccagcctcctcccgtggtggacacgtctgagtcggtg
acagagatcacgtccagtagcttcatcatctcctgggtgtcagcctccgacaccgtgtca
ggcttcagagtggagtatgagctgagtgagaacggagccaaacctcaggtcctggacctg
ccccgtaccaccacctctgtgagcatcagtgacctcctgcctggccgtagatacaacgtc
aacgtgtatgaggtttcccctcagggagaacccaccctcatcctcaccacctctcagacc
acagctcctgatgcccctgctgaacatcagatcaaccaggtgggagaaacctctatctcc
atcagctggtccaagccccaggcccccatcacaggctaccgtttggtcttcaccccgtca
gtagagggcagcagcaccgagctcatcctcccagacactgagacctccgtgaccctggtt
gaccttcaacctggcctgctctacaacatcagcatttacgctgtggaggagaaccaggag
agcgagcccatcttcgtccaggtcaacacggccggagagccagcaccagaggaagtccgc
tcccctaccgaccttcagttctacgaggtgtctgacgtgaaaatcatcatcacctggacc
ggccctcccagcgaggtgtcgggttaccgcgtgacctacgcccccgttacccccggtgac
acgccccagaggcccctgcagctgcccatgacggccaacgcgtacgcagagatcacccac
ctgcagcccggaaccctgtaccgcttcaacatctacgccatcaacggaggagtggagagc
gagccgctgacgggagagagagccaccaagcccgacgcccccaccaacctgcgtttcact
gacatcggcgaggacggtgtgataatgatctgggaggctcccagggctagcatcagcggc
taccgtctgttcctgagcgtggaaggctccagcccaacccagaagagaatccccggcggt
cagacccagttccctctgcgaggcctccgccccgacacagactacaccgtcaaactgcac
tctgagcaggacaacgtgttgagtgaggaagtcaatggcatcttcaccacctgtgacccc
aaagatgggtaatgccctcgcttcaccactgatgtgaccgacacctccatcatcatctcc
tggacccctgtcagcaggttcagcttcaggctgtctgtgaggcccagtcagggaggagag
tcacccagggaagtgacctctgactcaggaagtatctttgtgtcaggcctgacccctggg
actgagtacacttacagtgtacagcccattatcaacggacgtgaccgcggcaaccccatc
actaaaaacgttgtcactcaactgtctccccccactgacctcagtacgcagtccaacgcg
gacacgggtgagctgactgtcctgtggggcggcgccaacacgccagacatcacaggctac
agagtgacatgcaccccgaccaatgggcagcgaggaaactccctggaggagttagtccag
ccggtccagaaccagttaatcctggagaacctgagtccaggagtggagtacaacgtctct
gtctacactgtcaaggacaacctggagagtgtccctgtgtccaccactgtcacccaagac
gtgcccaagctaaacgacctggactttgtcgacgtcaccgacaccactgtgggcctgcgc
tggaccgccctggtaaacgttagcgccatcaccagttaccgggtaacggttatggcgtcg
ggcgagagtttgcccatcatcatggatacggtggactcgtcgacgggccattatacggtg
cgcgggctggagcccggtgtggattatgacatcagtgtcactacgataacggaggaaggg
gagagcgagccggccacacgcagaacgcaaacccagactgccgtccccgcccccaccaac
ctgaacttcggaggggtgggccccgatcacatgagggtcagctggaccgtccccaacgtc
cccacgcccagtgacatcacacgctttgtcatccgcttccaccccagcagcaacgacgac
gatgtcaaggagctcaacgtgggcggagccaccaacaccttcctgctgcagaacctgctg
cccaacacagagtacagggtgagcgtggtgtgtgtttacgaggagagagaaagcgcacca
gtcactggcactcagagaacaaccctggactctcccactggcctggactttgctgacgtc
ctgaccaactccttcaccatccactggctggcccccagcgccgtgatcaccggctaccgt
atccattaccagatgaccagcggaggcagggccaaggacgagagactgcccccgaccagg
agccacttcaccctgactggcctggctcccgagacagagtacagtgttgaggtctacgct
gtcagcgggaaccaggagagtctgcctctcactggcactcaggctactatctctgacgcc
cccaccgacctggaagtgacctcaaccagccccaccagcatcaccatccgctgggacgcc
ccctccgtcaccgtgaggtactacagaatcacccacggagagacaggtggagaaagccct
gctaaggagttcactgtccccggctcccagtccgaggccaccatctctaacctgaaccca
gggacagactacaccatcaccgtctacgctgtgacagggagaggggacagcccggcctcc
agcacacccatctacgtcagtcacaagactgacgtggagggccccaccaacatggacgtg
actgatgtgaaggacaacaccatcacagtgcgctggtccgcggcccagggccccatcaag
ggctacagggtcaccagcgtccccaagaatggacagggcccctctttctctgaggtggtg
gcccctgatcagaccgagattacgtttactggcttgatgcccacggtggagtacgttctg
agtgtgaccgctctgggaaccgatggagaaccttccacacctctggtagagaacgccatc
acagcaatggaccatcccaaggccctatccttctctgaggtggactccacctccctgagg
atcacatgggacagtccggacggcacggtgacatcataccgcgtgctgtactccagccct
gaggagggcgagagagagctgcgcccggcgcccagagggacagacgataccgtggtactg
aggaatctccgccccggcacagagtacactgttaaggtcatcgctctgcacggacgcacc
cccagcaccccactggtgggcacacaggccacagctatccctgctcccaccaatctggac
atctctgaggttggtgacacctccttcattgtctcgtggcgctccccangctccgggctg
tctgggtaccgtgtggttgtcaaccccaagaacaacaatggacccaccaaggagatgacc
atcgccccagacaccacgcgcgccgtggtcccaggactcatggtggccactctgtacaca
gtgcacgtttacgccctgaagaactctgtgaccagccgacccctggagggagaggtcacc
acgctggacaacatcagtcctcctcggcgtgtgcgtatctctgacgtgaaggactcggcc
atcacgctgacctggcgtgctaaggttgagaccatcaccgggtaccttatcgaagctcag
cccctcggcggcagccgcccgatcaagaagacaatccccggagagcaacgcacctacacc
atcactggtctggagccaggcacctcctacactatccacatctacaccatcaacggcgat
gcacgcagcgcccccttcaccctcacggccaccacagccaaaccagcggtgcattccccc
accaacctccagttcacctccctgacccccaactccatctccttcagctgggaanccccc
gccacgcgcatcacaggatattacatcacctacgaggaggcaggcagggcgcagccccgt
gagcttaccccccgcccccacgctggccagaactacgccaccatctctggtttgagacca
ggtaccgagtacatcatcaagatcatcgctcttcagaatgtccagagaagcaccccattg
gtgggaacggccaggactcaacgtgaatccctgcttacactgccactccccaaccgcccc
ggaggctacgaccacctggacgtgcctgaagaaaaggagagccgtgtcccaacagtagta
ggtaacaacggcctagacaccctggggggccagggccagaacgtggagtacactgagtac
aacaaccagaacccccagacaccctatgggaatggccagacaccctatgggaacggccag
acaccctatgggaacggccagacacccctggtgtttgtgccccttccggacgcggagggg
cgcagggtgccggtggtgagcgtgaacgtgcctggtggctctccctttggttttccagag
aaggacacaggaatccctcaggaggcccagacccagaccaccatcgcctggaagccttac
aagcagagttcagagtacctggtgtcctgcaacccactgacacacgtcaacgagaagatg
ttccagatgcgtctgcctggtacctccaccagtgccactctgatcggcctgaccagcgga
gcctcctacaacgttatcgtagaggccctgaagggggcactcaaacacaagatcctggag
gagattgtcaccgccggcaacaccctgacagagggttccaccggcacagataaggactcg
tgctacgacaccttcacagcgacctaccatgacgttgggaccgagtgggagcgcatgtct
gagacgggcttcaagctgtggtgcaggtgtctgggactaggcagtggacacttccgatgt
gactcctctaagtggtgtcatgatggaggtaacaactaccgtgtcggggaannatgggag
cgtcaggaggagaagggccccatgatgagctgcacctgcctgggcaacgggaagggagag
ttcaagtgtgaaccacatgagtccacctgctatgacgatgggaagatgtaccagattggt
aaccagtggcagaaagaatacctgggagccatctgtacctgcacctgctacggaggacaa
cagggctggcgttgtgagaactgtcgtagaccaggtgctgaggtggactctagtctgctg
cagcccgtccgatacagggaccccaccaacacactacgcaaagtgaacatccagtgcccc
atcgaatgccttcgacctgaactactggcagacgcactggcagaaggacacatcccccag
aatcccctggagtaa
DBGET
integrated database retrieval system
