Oncorhynchus gorbuscha (pink salmon): 124019740
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Entry
124019740 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase arih1 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124019740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124019740
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
124019740
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
124019740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_14
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
124019740
NCBI-ProteinID:
XP_046191115
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MDSDEGYNYEFDEEEEECSEDSAEEDPEDDTLEVELDDPVVAGGERDECGETGGSGLGPG
QDEEDYRFEVLTAEQILQHMVECIREVNDVIQNPATITRILLSHFNWDKEKLMERYFDGN
LDKLFSECHVINPSKKSRTRLMNTRSSAQDLPCQICYLNYPNSYFTGLECGHKFCMQCWG
DYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITESKVKLKYQHLITNSFVECNRLL
KWCPAPDCHHVVKVQYPDAKPVRCTCGRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSET
SNWIAANTRECPKCHVTIEKDGGCNHMVCRNQSCKAEFCWVCLGPWEPHGSAWYNCNRYN
EDDAKAARDAQEVTRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAGVKAKMEEMQHHNMS
WIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENATEVLSGYLER
DISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgaagggtacaattatgaattcgacgaggaggaagaggaatgcagcgaa
gacagcgccgaggaggatcccgaagacgacaccctggaagtggagttggacgatccggtt
gtggccggtggagaacgagatgaatgtggggagaccggaggcagtggcctgggacccggt
caagacgaagaggattatcggttcgaggttttgaccgctgaacagatccttcagcatatg
gtcgagtgtatccgggaggtcaatgatgtcatccagaaccctgcaacgataacaagaata
cttcttagtcacttcaattgggacaaagagaaactgatggaaagatattttgatgggaac
cttgacaaattgttctcggaatgccatgtcatcaaccccagtaagaagtcgaggacacgg
ctgatgaacacgaggtcctctgctcaggatcttccctgtcagatctgctacctgaactac
ccaaactcgtacttcactggcctggagtgtggacacaagttctgcatgcagtgttggggt
gactacttgactaccaaaatcattgaggaggggatgggacagacgatttcctgccctgct
cacagctgtgatatattggtggacgacaacacagtcatgagactgatcacagagtccaag
gtgaagttgaagtaccaacacttgattaccaatagttttgtagagtgcaatcgactgtta
aaatggtgcccagcgccagactgtcatcacgtagtcaaagtccagtacccagatgctaag
cctgtgagatgcacatgtggccggcagttctgcttcaattgtggcgagaactggcatgat
cccgtcaagtgtaagtggttgaggaaatggatcaagaagtgtgacgatgacagcgagacg
tctaactggatcgcagccaatacaagggagtgccccaaatgccacgtgaccattgagaag
gacggcggttgcaaccacatggtgtgtcggaaccagagctgcaaggcagagttctgctgg
gtctgcctggggccctgggaaccacacggctctgcctggtacaactgcaaccgctacaat
gaggatgatgccaaggcagcgagggacgcccaagaggtaacacggtccagggcagccctg
cagaggtacctgttctactgcaaccgttacatgaaccacatgcagtcgctgcgcttcgag
cacaagctgtacgccggggtcaaggccaagatggaggagatgcagcatcacaacatgtcc
tggatcgaggtgcagttcctgaagaaggccgtggacgtgctgtgtcagtgtcgctccact
ctcatgttcacctacgtcttcgccttctacctcaagaagaacaaccagtccatcatcttt
gagaacaatcaggctgacttggagaacgctacggaggttctgtctggatatctagagcgg
gacatctcccaggactctctgcaggacatcaaacagaaagtacaggacaagtacagatac
tgtgagagtcgacgtcgggtgctgctgcaacatgtgcatgagggctatgagaaggacctc
tgggaatacatagaagattaa
DBGET
integrated database retrieval system
