Oncorhynchus gorbuscha (pink salmon): 124019838
Help
Entry
124019838 CDS
T07892
Symbol
il16
Name
(RefSeq) pro-interleukin-16 isoform X1
KO
K22628
interleukin 16
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124019838 (il16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ogo04052
]
124019838 (il16)
Cytokines and neuropeptides [BR:
ogo04052
]
Cytokines
Interleukins
124019838 (il16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
124019838
NCBI-ProteinID:
XP_046191226
LinkDB
All DBs
Position
Unknown
AA seq
1769 aa
AA seq
DB search
MMIDYECPSPLACVPAGRSVCESVLAPHTHTHAAHTHTLTAMPQRYSYQKRKASTAAARR
MERRGRDSGKTNNTNTSHSHRSKKLAMLSRSLILCHSRASDDCPSPEERPPGEAWKGDRG
LGRDGKGNREVERSQKKIQEGPQESEGTMQASTQPHVGATNTLRATGEHKRNMRRSFSIK
ESSIWRMCVTTGAGEEGLGRQTGDSSPQTEDKEPSVERGRKGGGDGHSYLQSTDKLAPFN
GQCLNGHARTEGERQAKNGHAARTEGEGGRHAASRNSHITAYSEESSTSEQQPQSPGGLT
LAPLHSAPLCLADPLAVTNCTETEHTGNNNHLKLAIPEVNEDRGWDTERRGHGLQGQTVC
KRTRSNSTSVHPYWIGDLDTIILKTPELCGSNTHGTVGFFGSRKSQSQQLEFPHNPNQPV
PRPSRSLSSAHLVHSCSNVQAFIICNIVLMKGHGKGLGFSIVGGRDSMYGPMGIYVKTIF
AGGAAAADGRLQEGDEILELNGESLHGLTHEDALQRFKQIKKGLLTLVVRTSLRVGALCG
QAAVAQLCRSRSLSSSTGMSRVSTEMGDYNYLSGVTTANTHTNTVPQPPSAKPRDRVMME
ITLHKEAGVGLGIGLCCVPSGDGCRGVYIHTLSPGSVAHMDSRLRCGDEIMEINNTVVYN
MVLNDVYTVLSQCSPGPVQIIISRHPDPKVSEQQLNDAIAQAVETSQLKQDASQWSIDGL
RRSDPCSHSRGKCERCVARNFSQLTARRAQKNMTRSCSDSNTYNQNHHHNHQHNRCPGPG
TNLVNGQTLTIPNHNHNMHHNLMERVHSLDIPMGSTPEPWCDNRLSALVYPVPDDDYNVP
YNSPAANLSCQRTLDLATRGNKNRPKDLAPPRRYCRHQDVTSEEGAPGGLPDPNVSSRGS
PVKEDGWSPTHTNCQEVESEREREREHSGGSGETLTHSEARSAAIIDCPRYSSCTEDRLH
TGAESAFHLCSQSKRLGLRRQGRVEQLPPEKLHDPWVRISDSAPDLGGPEDPHQNQSLTH
PSTHRHNTHSHSSTHQQQTHHLSSHHDATHTPSQTDRHPNDTHSPVAMSQPSEFSELPEL
NCTSTHHTAPDSTTPSTPASLISTPSPRTEDPPGVRKGPPVAPKPVWNRQSLRSIRNGRP
QAELAKPLDIRGGGTTFGVRLRPTSSTAQLSIKQKIHSFETFSSPEGKGQEMEGNNRRPL
APSTPLPLKDKAPVRIDPPLLEENGIIQNDMGKGAKMTSPIPDEDQDRRMSSFPPGASPH
SILPPSPASQPSPPTCFSLLPTPHPTSELQTPVEETTDPNAEISDSPSPEDTITSPSTLE
APLPEAEPETEPLDGAVEASISPLGPVPRRSSSSKGESFGPLQPPEEEGDQSHAQAQGKQ
ASLRTRSLPLPTSPSPDGSTTLQGLEGESLGKILSFSNQVSHALMRSMHSLLPSLCPTWP
GNPGSDPPTASPLVCSPEEPDPAQNTPLSPGPDSNENSFSVSLSDLRQCTIERGEEGRIL
VSRPSPSACAHSVISAIPPQEIQTMIQEVKALDEETLKQFEHIQVVILHKEEGAGLGFSI
AGGIDLESKATTVHRVFPHGLAAQEGTVEKGDEVLSINGQTLRGATHADATATLRQARTM
RLAVVVVSKGREGGNKTDDCSVSSSSTDLNPTVEDGGDIMTVELETGGGGVGFSLDGGKG
SIHGDRPLAINRIFKGTVLSMETGLWSSTGYLKVQYYPWRKSTDCCLTMSLNSNRVSKSI
YHFVTWVNFRCHLADTVIQVTYSSVCIHF
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgactatgagtgtccctctccattagcctgtgtgccggctgggaggagtgtg
tgtgagagtgtgttagcaccacacacacacacacacgcagcacacacacacactctaacg
gccatgccccagagatactcctaccagaagaggaaagccagcacggcagcagctcggagg
atggagaggcgaggcagggactctgggaagaccaacaacaccaacactagccacagccac
cgctccaagaagctcgccatgctctccaggtccctaatcctctgtcactccagagccagt
gatgactgccccagtcccgaagagagaccgccaggggaggcctggaagggagacaggggc
ttggggagagatgggaaggggaacagggaggtggagaggtcccagaagaagattcaggaa
ggaccacaggagagtgaaggaactatgcaggcatctacacagccacacgtaggggccacc
aacacactcagggctacaggagaacacaagaggaatatgaggaggtccttcagtatcaag
gagagcagtatctggaggatgtgtgtaacgacgggggcgggtgaggagggtctgggccga
cagactggcgatagcagcccccagacggaggacaaagaacccagtgtggagcgagggagg
aagggaggaggggatggacacagttaccttcagagtacagacaagcttgcaccttttaat
ggacagtgtctgaacggccatgccaggacagagggggagaggcaggccaagaacggccat
gctgcaaggacagagggggagggagggaggcatgccgcctccaggaacagccacataaca
gcctacagtgaggaaagctcaacaagtgagcagcagccccagtcccctggaggtctaacc
ctggccccccttcactcggcccccctgtgcctggcagaccccctggcagtgaccaactgc
acagagacagaacacactgggaacaacaaccacctcaagctggcaatcccagaggtgaat
gaggacagaggttgggacacagagaggagaggacatggtcttcagggacagacggtctgc
aagaggacccgctccaactctaccagtgtccatccatactggattggagacctggacacc
attatcctgaagacgcctgagctttgcgggagcaacacccacggaaccgtcggtttcttt
ggcagcaggaagtcccagtcccagcagctggagtttcctcacaaccccaaccagcccgtt
ccccgtccctctcgctctcttagctccgcccatctggtccactcctgcagtaacgtccaa
gcattcatcatctgtaacatcgtgctgatgaagggccatggcaagggtctggggttcagc
attgtggggggcagggacagcatgtacggacccatgggtatctacgtcaagaccatcttc
gctggaggggccgcggctgcagatggcagactacaggagggggatgagatcctggagttg
aatggagagtctctacatggactaactcatgaggatgcactacagagattcaaacagata
aagaagggtctgttgactctggtggtgaggaccagcctgcgtgtcggcgccctctgtggc
caggcagcggtagcacagctgtgtcggtctcgctctctcagctccagtactggcatgtcc
agggtcagcactgaaatgggggactacaattacctcagtggtgtcaccacagccaacaca
cacaccaacaccgtacctcagccaccttcggccaaaccccgagatcgtgtcatgatggag
atcaccttgcataaagaggctggtgtggggctgggcattgggctgtgttgcgtgccgtct
ggagatggttgccgtggcgtctatatccacaccctgtcccctggatcggtggcacacatg
gacagtagactcagatgtggagatgagattatggagatcaacaacacagtggtatacaac
atggtactgaatgatgtgtacacggttctgagtcagtgctcccccgggccagtccagatc
atcatcagtcgacaccctgaccccaaagtgtcagagcagcagctgaacgatgccatagcc
caggctgtagagaccagccaactaaagcaggacgccagtcagtggagtatagatggcctg
cgtaggtctgacccctgctcccactccagagggaagtgtgagcgctgtgtggcgaggaac
ttcagccaactgactgcccggcgagcccagaagaacatgacccgctcctgtagtgacagc
aacacatacaaccagaaccaccatcataaccatcagcacaaccgctgccccggaccagga
accaacctggttaatggtcaaaccctgactatacccaaccacaaccacaacatgcaccat
aatctgatggaaagggtccacagcctcgacatccccatggggtccacgcctgagccctgg
tgtgataacagactgtctgcattggtctaccctgtccctgatgacgactataacgtcccc
tacaactccccagcagccaacctctcctgccagcgcacgttagacctggccacaagggga
aataagaacaggcccaaagacctggcacctccaaggaggtactgccgacaccaggacgtc
actagtgaggaaggggcccctgggggcctgccagaccccaatgtttccagtagaggttcc
cctgttaaagaggacggatggagtcccacacataccaactgtcaggaagtagagagtgag
agagaaagagagagagaacactcagggggaagtggagagactctcacccactcagaggct
cgctccgctgccatcatcgactgccctcgatactcatcctgcacagaagacagactacac
acaggtgctgaatctgccttccacctctgctcccagagtaagaggctgggcctgaggagg
cagggccgcgtggagcaactccccccagaaaagcttcacgacccctgggttaggatctcc
gacagcgcccctgatcttggaggtcctgaagatccccatcagaaccagagtctgactcat
ccgagcacacaccgtcacaacacacactcccacagtagcacacaccaacaacaaacgcac
catctcagctcacaccacgacgccacacacactccatcccaaaccgacagacaccccaac
gacacacactccccagtcgccatgagccaaccgagtgagttttccgagcttcctgaactc
aactgtacttccacccaccacaccgccccagactccaccaccccctccacccctgcctcc
ctaatctccacccccagcccaaggactgaggaccccccaggggtgaggaagggccctcca
gttgcccccaagcctgtgtggaaccgtcagagcctcaggagtattaggaatgggaggccc
caggctgagctggccaaacccctggacatcagaggcggtggaaccaccttcggggtacgt
ctgcggcccacctcctctacagcccagctgtcaatcaagcagaagatccattcatttgag
accttctctagtcctgagggtaagggtcaggagatggagggcaacaacaggaggccccta
gccccctccactcccctccctctgaaggacaaggcacccgtcaggattgacccccccctc
ttagaggagaatggcataatccaaaatgacatgggcaaaggagccaaaatgacctctcca
atccctgacgaggaccaggacaggaggatgtcctcttttccccctggagcctctcctcac
tccatccttccgccctctcctgcctcccaaccttctcctcctacctgcttttctcttctt
ccgaccccccaccctacctcggagctccagaccccagtggaagagacaacagaccccaat
gcagagatctctgactcgccatcccccgaggacaccatcacctccccatccaccctagag
gcacctctccctgaggccgaaccagaaacagagcccctggatggggctgtagaggcctcc
atctcccccttgggcccggtgcccaggaggtccagcagctccaagggagagagctttggt
ccactacaaccaccagaggaggagggagaccagagccatgcccaggctcagggcaagcag
gccagcctgcggacacgtagcctgcccctgcctacctctccctccccagatgggtcaaca
actctacaaggactggagggagagagcctggggaagatactttccttcagtaaccaggta
tcccatgccctgatgcgttccatgcactccctgctcccctccctctgtcctacttggccg
ggtaaccccgggtcagatccaccaactgcatcccctctagtctgcagcccggaggagccc
gacccggcccagaacactcccctctcccctggccccgacagcaatgagaatagcttctct
gtcagcctgtctgatctgaggcagtgtaccattgagcggggggaggagggaaggatcctg
gtctcacgcccatctccgtcagcatgtgcccactctgttatttcagccatccctccacag
gaaatacagaccatgatccaggaagtgaaagctctggatgaggaaacactgaagcaattt
gagcacatccaagtggtgattctgcacaaggaggaaggagcaggtctgggtttcagcatt
gcaggtgggatagacctggagagcaaggctaccacagtgcatcgtgttttcccccacggc
ctggcggctcaagaggggacagtggagaagggtgacgaggtgctgtccatcaatggccag
acactaaggggtgcgacacatgcggacgccaccgccacgctgcgccaggcccgcaccatg
agactggccgtggtggtggtgagcaaggggagagagggagggaacaagactgatgattgc
tctgtcagcagtagcagtacagacctcaaccccacagtggaggatgggggagacataatg
actgtggagctggagacaggaggagggggcgtgggcttcagtttggatggagggaaaggc
tctatccatggagacaggcctctggccatcaacaggatatttaaaggtacagtactatcc
atggagacaggcctctggtcatcaacaggatatttaaaggtacagtactatccatggaga
aaaagcacagattgctgccttactatgtccctaaactctaacagggtaagcaaatcaata
tatcattttgtaacttgggtgaactttaggtgccatttagcagacactgttatccaagtg
acttacagtagtgtgtgcatacatttctag
DBGET
integrated database retrieval system