Oncorhynchus gorbuscha (pink salmon): 124019840
Help
Entry
124019840 CDS
T07892
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
124019840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogo02000
]
124019840
03037 Cilium and associated proteins [BR:
ogo03037
]
124019840
Transporters [BR:
ogo02000
]
Other transporters
Pores ion channels [TC:
1
]
124019840
Cilium and associated proteins [BR:
ogo03037
]
Other cilia and associated proteins
Stereociliary proteins
124019840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF6221
Motif
Other DBs
NCBI-GeneID:
124019840
NCBI-ProteinID:
XP_046191230
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MSGVSETAVVSRPSTTVKRHKSVRKNSRRIYSSYQDNQPGQSDEEGKEDEHADSNDPEEM
FQNIQFQKEIIANIRTRAWPMRRKLKALKQAREIVLKYEGRLTRTRGYQAAGADLLKKVS
RLLYNIVVLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTVMTGAFIVIPELLA
GEPFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGPVRKLGSAGYRLPLAY
FLVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAESKGA
AIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLELE
KPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSL
IIALLDKVNSMSMASAAAAAAASVVSGNLSDSTAFMATISQPGETSLSTLVSDISISENH
NSTIATIAMVLDVNTSISTSKVTMATMYNHTGMFEQNKQKKPDECWETYVGQEMLKLSII
DMIFTVASILLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMG
SFFSPCLPAFNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLP
TIFAIVRYRPSQHCGPFSGQEKIYDIISETIANDFPLWFSKVMSYVTSPVVALPALLLLF
MLIYYLQAIARSLKFTNNQLRMQLQTERTEDKKKVLQLASARLQAPEVPGGDRKPDQQDG
DITSRESSIRTPSPRPNGSVTNFQSPDRRGNGIRTITQSASRVQTARATFAAGAPRSPTV
SILHKQRPEIIPNRHPSYLGGPSGTCRSKSYHHVAYNPPTRYSSENIHSDPLYRKTIRPM
HSTEAAGIVTAQSYVGRRPYTTRYVIVNEHEARKKLLRSATRVPRHFRAEDAGGEIVELI
PRNTKRYTPRAPHLHGHPHRSNPPQSHLSDEEEEEEAGGKRESRRGSFGQTHRPRSLSDL
QQPARFYIGERLETKLSMASKDSHTARGRYGGEAQKGDREDMETRLHSLSQTSIRGAELP
PPVRHTQSPARHPHTPSRLVHSPPQGPGRRLEPQVKPKTSRSKLEPSLTESDSASLASSS
DQQNSSTDQYIQVIHNKEKYLKSEARQGKLAKKKSKASIDLNVSGSKDLVCSNV
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgtgtctgagactgctgtggtcagtagaccctcgactaccgtgaagcgacac
aagagtgtcaggaagaactccaggcggatttactcatcttatcaagacaaccagccaggc
caatcagatgaggagggcaaggaggatgagcatgcagacagcaacgacccagaggagatg
ttccagaacatccagtttcagaaggagatcatcgccaacatacgcacccgagcctggcct
atgagacgcaagctcaaagccctcaagcaggccagagagattgtcctgaagtacgagggg
aggctaacaaggaccagagggtaccaggctgctggggctgatctgctgaagaaggtctcc
aggttgctgtacaacatcgtggttctgtttattccctgggagatgaggatcaagaaaata
gaaagtcactttgggtcaggggtggcctcctacttcatcttcctcagatggctgtttggt
atcaacatagtccttactgtcatgactggagcattcatagtcatacctgagctcctggcc
ggagagcccttcggaacaacccggagtaagaccattcccaaggagcacctggcctcagcc
caagatctggacaccatctggtctcttgggggctacctccagtactcggtgttgttctat
gggtactatggcccggtgaggaagctcggcagtgccggctatcgccttcccctggcctat
tttctggttgggatggctgtttttgcctacagtttcatcattctgttaagaaagatggct
aagaactcccgtctgagcctagccagtgcctctgatgagaacttcaccttctgctggaga
gtgttctgtgcctgggactacctcatagggaaccctgaggctgcagagagcaagggagcc
gctatcgtcaacaacatcagggaggccattgttgaggagcaggagaaaaagaaggatact
agtctagcagtcctgatcagtctgcgtatcctagccaacatcctggtccttctctctctg
gctggcagcatttatataatctactttgtggtggaccgctcccagaaactagagctggag
aagccagagctaacactatgggagaagaatgaggtgagtgtggtggtgtccctcatcacc
atgatcgccccgtctgcctttgagctggtggctcagctggagatgtaccatcccaggacc
tccctgcgcttccagctggccagagtcctggtgttgtatctgggtaacctgtacagcctc
atcattgcccttctggacaaggtcaacagtatgagtatggcgtcagctgctgcagctgca
gcggcctctgtggtttcggggaacttgtctgactctacggcattcatggcgaccatctcc
cagccgggggagaccagcctctccaccctcgtatccgacatctccatctctgaaaaccac
aacagcaccatagcgaccattgccatggtgctggatgtcaacaccagcatcagcaccagc
aaggtcaccatggcaaccatgtacaaccacactgggatgtttgagcagaacaagcagaag
aaaccggacgagtgctgggagacctacgttggacaggagatgttgaagctgtctatcatc
gatatgatcttcacggtggccagtatcctgttgatagacttcatcagagggctggtggtc
aggtacctgagtgactgctgctgctgggacctggagagcaagtttcctgagtatggggaa
ttcaagatagctgagaatgtactccacctgatatataaccaaggaatgatctggatgggt
tcgttcttctctccctgtctgcctgcctttaacgtgttgaagctgataggcttgatgtac
ctgaggagttgggctgtgctcacctgtaacgttcctcaccaacaggtgttcagagcatcc
agatcaaataatttctacctggctatgctgttgttcatgctttttctgtgtatgctgccc
accatcttcgccatagtgagatacagaccttcccaacactgtgggccatttagcggtcag
gagaagatttatgacatcatctcagagacgatagccaatgacttccctctgtggttcagt
aaagtgatgagttacgtcaccagccctgtcgtagcgttgcccgctctgctgctgctgttc
atgttgatctactaccttcaggccattgccagatcccttaaattcaccaacaaccagctg
aggatgcagcttcagactgagagaacagaagacaagaagaaggtattacagctggcttca
gcgaggctacaggccccagaggtccccgggggggacaggaagcctgaccagcaggatggt
gacatcaccagccgcgagtcgtccattcgtacgccgtcgccacgacccaacggcagtgtc
acaaacttccagtcgcccgatcgtcgtggcaacggcatccgcaccatcactcagtcggca
tcgagagtccagaccgctagggcgacatttgctgctggggcgcctagaagtccaacagtg
tccatacttcacaagcaaaggccggagataatccctaacagacacccttcctacctgggg
ggccctagcggtacctgcaggtccaagtcctaccatcatgtggcgtacaaccccccgaca
cgctactcctcagagaacatccactccgacccactctacaggaagaccatcaggcccatg
cactccacagaggcagctgggatagtgaccgcccagagctacgtgggccgtcgcccctac
accacgcgctacgtcatcgtcaacgagcacgaagctaggaaaaagttgcttcgatcagcc
acacgcgtccctcgccacttccgagcggaggacgcggggggtgaaatcgtagagctgatc
ccgcggaataccaagcggtatactccaagggctccgcatctgcatgggcacccacacagg
tcgaatccgccgcagtcacacctgagtgatgaagaggaggaggaagaggcaggggggaag
agggagtctaggagagggtcgttcgggcagactcaccggccccgctcactctccgacctc
caacagccagctcgcttctacatcggagagcgcctggagaccaagctgtctatggcgtca
aaagacagccacactgctaggggacgctacggcggtgaagcccaaaaaggggacagggag
gatatggagacgcgcttgcactccctctcccagaccagcatcagaggagcggagcttcca
ccaccagtcaggcacacacagtccccagccagacacccccacacccccagcagacttgta
cactcacccccacagggcccaggaagacgcctggagccccaggtcaagcccaagacatcc
aggtccaagctggagccttccctgactgagtcagactcggcctctctggcctccagtagc
gaccagcagaacagcagcacagaccagtacatccaggtcattcacaacaaggagaagtat
ctcaagtctgaggcaaggcaaggcaaactggctaagaagaagtccaaagccagtatagat
ctcaacgtgtctgggtccaaagacctggtctgctccaacgtgtag
DBGET
integrated database retrieval system
