Oncorhynchus gorbuscha (pink salmon): 124020000
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Entry
124020000 CDS
T07892
Symbol
papolg
Name
(RefSeq) LOW QUALITY PROTEIN: poly(A) polymerase gamma
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124020000 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124020000 (papolg)
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
124020000 (papolg)
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
124020000 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
GH97_C
Motif
Other DBs
NCBI-GeneID:
124020000
NCBI-ProteinID:
XP_046191371
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MKEMSANSNSMHGGQQPQKHYGITSSISMAFPREVDHQYTHKLSDAMKPFGVFEDEDELN
HRLAVLGKLNTFVKEWIAEISETKNLPPSAITNVGGKIFTFGSYRLGVHTKGADIDALCV
SPRHVERTDFFDSFFAKLKLHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIP
DNLDLRGDSHLRNLDIRCIRSLNGCRVTDEILYLVPNKENXYIGPNKENFMAYPRAIRTV
IHGRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQP
EDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSSSTRTIMNEEFKYGLSVTDD
ILQGKTDWSKLFQPPNFFLKYKHYIVLTASASTEENQLEWIGLVESKIRVLVGNLERNEY
ITLAHVNPTSFPGNKESCSENEFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQ
ANNINMLKDGMKIEATHVKKKQLHQYLPVELVQRKKRSIVELNRNSNGGSSKRSSLDGSQ
LDSSRDTDSGTPFSSPTSACKPSRPATSDTDDSLTPPKLPASLFVENSSSGPDVSPPRAD
QEKGLSIPVIGSKSKPSAPTGPVGSTIPTVVGRSVVSLPGSTSTTEQNQNGSKRLHSPTL
EDQSKRLKDSAEPLADVLTFKEPFPPSGDGREQGDGVQVVSPPAGSTIPTVVGRSVVPCL
GSSRDTSSPTEQNQNGATAAAKRPHSPTQDGPPKRIRDPADLLVSGDDSAFKEPFPLSSD
GQEQGDGVNVESLGGVKAMPIPTIDTSRTQRLPSMELPDVTSPLPSSNHQRVVKNSIRLA
LNRHR
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtcagcgaacagtaacagtatgcatggcgggcagcagcctcagaaacac
tatggcattacctcatccattagcatggccttccccagggaggtggaccatcagtacaca
cacaagctcagcgatgccatgaaaccctttggcgtgtttgaggatgaggacgaactcaac
cacagactcgcagttcttgggaagttgaatacatttgtcaaggaatggattgcagagatc
agtgaaacgaagaacctcccaccatcagcgataaccaatgtggggggaaagatcttcacc
tttgggtcttaccggcttggagttcacactaaaggggcggatattgatgccttgtgtgta
tcgccgcgacacgtggagaggacagatttcttcgactcattctttgcaaagctcaaactg
cacgaagagatcaaagacctacgggcggtggaggatgcctttgtacctgtgatcaaattc
aagtttgacggcatcgagattgacctgctgtttgcgcggctggctctgcagtccatccca
gataacctggatctgagaggagactcccacctgaggaacctggacatccgctgtatccgc
agcctcaatggctgcagagtgacagatgagatcctgtacttggtaccaaacaaggagaac
taatacattggtccaaacaaggagaacttcatggcctaccctagggccatcaggactgta
atacatggccgtgggatctactccaacatgttgggcttcctgggtggagtctcctgggcc
atgctggtagccaggacctgccagctctaccccaacgctgtggccgccactctcgtacac
aagttcttcctcgtcttctccaaatgggaatggccaaatcctgtgcttttgaaacagcct
gaagacagcaatctgaatctccctgtttgggatccacgagtgaatccgtcagaccggtac
cacctgatgcccatcatcacgccagcctacccccagcagaactctacctacaacgtctcc
tcttccacacgcaccatcatgaacgaggagttcaaatacggtctcagtgttacagatgac
atccttcaggggaaaacagactggtccaaactgttccagccacccaactttttcctcaag
tacaagcattatattgttctgactgccagtgcatccacagaagaaaatcaattagaatgg
attggtctggtggagtctaagatccgtgtcctggtggggaacctggagaggaatgagtac
atcaccctggcacacgtcaaccccacatccttccccgggaacaaggagagctgtagcgag
aatgagtttgtgtccatgtggttcattggaatcatcttcaagaaagtggagaacgcagag
agcgtcaacatcgacctgacctacgacatccagtccttcacagatacagtttacaggcag
gccaacaacatcaacatgctgaaggatgggatgaagatcgaagcgacgcacgtgaagaag
aagcagctccaccagtaccttcctgttgagctggtgcagaggaagaagaggagcatagtg
gagctgaaccggaactccaacggcgggagttccaagcggtcctctctcgacggcagtcag
ctggacagttccagagacaccgactccgggactcccttcagctctcccacctccgcctgc
aagccgtccaggccggccacctcagacacagacgacagtttgacaccccccaagctgcca
gcctctctgtttgtggagaacagctcctcggggccagacgtctctccacccagggccgat
caggagaaggggttgtccatccccgtcattggatcaaagtccaagccctctgccccaacg
ggcccagtcggtagcaccattcctacagtagtgggtaggagcgtggtctctctccctggc
agtaccagcactacagagcagaaccagaacggatccaagagactccactcccctacgctg
gaggatcagtccaagagactgaaagacagcgcagagccgctggctgatgtcttgaccttc
aaggagccgttccctccgtctggcgacggcagggagcaaggggacggagtccaagtggtg
agtcctccagcaggcagcaccattcctacagtagtaggcaggagcgttgtaccctgcctg
ggctcctctagagatacatccagcccgacagagcagaaccagaacggagccaccgctgca
gccaagagacctcactcccccacacaggacggaccccccaagaggatacgagaccctgca
gatctgctggtgtccggtgatgactctgcattcaaggagccgttccctttatctagcgac
ggccaggagcaaggggacggagtgaacgtcgaaagtcttggtggggtaaaggctatgcct
attccaactatcgacacatcaagaacacagagacttcccagtatggagctgccggacgtg
acttctcccctccccagcagtaaccaccagcgagtggttaagaactccatcagactagcc
ctcaacaggcacaggtaa
DBGET
integrated database retrieval system
