Oncorhynchus gorbuscha (pink salmon): 124020020
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Entry
124020020 CDS
T07892
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124020020
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
124020020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
Ig_2
LRR_9
ig
LRR_Zer-1
Ig_C17orf99
LRR_EndoS
LRR_LRWD1
LRRNT
LRR_RPS2
V-set
Motif
Other DBs
NCBI-GeneID:
124020020
NCBI-ProteinID:
XP_046191396
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MTVLVSSRMVSGEAGGHSYLVACWQPILVLMLGTVLSGSTTGCPSRCECNAQERSVVCHR
RRLASFPEGIPIETKLLDLSKNRLKSLGPEEFINYPQLEELQLNENNISSMEPGAFSNLV
GLRTLGLRNNQLKLIQLGVFTGLSNLTQLDISENRIVILLDYMFQELYNLKALEVGDNDL
VFISHRAFHGLSSLEQLTMERCNLTSVPTEALSHLHNLLSLRLRHLTVNAVRDYSFKRLE
RLRVLEISYWPYLDTMTSKCLYGLNITSLTITNCNLTAIPYQAIRHLGHLLFLNLSFNPI
HTVEGNKLHNLMRLQAFHLVGGRLATIEPYSFRGLNHLRVLNVSSNSLSTLEESVFHSVG
NLETLALYGNPLACDCRLLWVFRRRWRLNFNRQQPSCSLPEAVQGKEFKDFPDILPSDSF
TCQKSRIQDHKALQRHVDEGTTVHYTCQADGDPAPVIMWLSPKKQFITTKSVGRLSVSPE
GTLEVRYAQIQDNGTYLCIASNAAGNDTKPAHLHVHSYSPNWPHQPNKTFAFISNQPSED
GANGTLAQVPFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKGNVKPNIEIEYVP
RKAEAGESSPTGDAPRKFNMKMM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcctggtaagcagtagaatggtgtctggggaggcaggtgggcacagctacctg
gtggcctgctggcagcccatcctggtcctaatgctgggcactgtcctctccggctccacc
accggctgcccgtcccgctgtgagtgtaatgctcaggaacgttccgtggtgtgccatcga
cggaggctggcctcgtttcccgagggcatccccatcgagacgaaactactggacctcagc
aagaaccgtctgaaaagcctggggcctgaggagttcatcaactacccacagctggaggag
ctgcagctcaatgagaacaatatctcttccatggagcccggggcttttagcaaccttgtc
ggcttgcgaactctggggctgcgcaacaaccagcttaagctaatccagttgggagtgttc
acaggcctcagcaacctcacccagctggacattagcgagaacagaattgtcatcctgctg
gactacatgttccaggagctgtacaatctgaaggctctggaagtcggcgataacgacctg
gtcttcatctctcaccgagcgttccacggcctcagcagcctggaacagctgaccatggag
cggtgcaacctgacctcggtgcccactgaggccctgagccatctgcacaacctgctgtcg
ctgcgactacgccacctcaccgtcaatgccgtcagggattactccttcaagaggcttgaa
cgcctgagggtgttagagatctcctactggccctacctggacaccatgacttccaaatgc
ctgtacggcctcaacatcacctccctgaccatcacaaactgtaacctcaccgccatccct
taccaggccatccgacaccttgggcaccttctctttctcaacttgtcttttaatcccatt
cacacagtggaggggaacaagctgcacaatctaatgaggctccaggccttccacttggta
ggagggagattagccacaatcgagccctactccttccggggcttgaaccatctccgagtc
ctcaacgtatccagcaatagcctgagcaccctggaggaatctgtgtttcactccgtgggg
aacctggagaccctggcactgtacgggaacccactggcctgcgactgccgactgctctgg
gtcttccgtcgccgctggaggctcaacttcaaccggcagcagccctcctgctctttgccc
gaggccgtgcagggcaaggagttcaaagatttccccgacatcctcccctccgattccttc
acctgccagaagtccaggatacaagaccacaaggcactgcagaggcacgtagacgagggc
acaacggtccattacacatgccaggcagacggcgacccagcccccgtgattatgtggctg
tcccccaagaagcagttcatcaccaccaagtcagtggggcgtctcagtgtgtcccccgag
ggcacgctagaggtgcgctacgcccagatccaggacaacggtacctacctgtgcatcgcc
agcaacgccgcagggaatgacaccaagcctgcccacctgcatgtgcacagctactcgccc
aactggccgcaccagcccaacaagacgtttgctttcatctccaaccagcccagcgaggac
ggggccaacgggaccctggcccaggttcccttcccattcgacgtgaagactctgatcatc
gccaccaccatgggatttatctcgttcctcggcgtcgtcctcttctgtctcgtcatcctc
ttcctctggagcagaggaaaaggcaacgtcaagccaaacatagagattgagtatgtgccg
cgtaaggcggaggcaggtgagagtagtccaaccggcgatgcgccacgtaaattcaacatg
aaaatgatgtga
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