Oncorhynchus gorbuscha (pink salmon): 124020023
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Entry
124020023 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II transactivator-like
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ogo01001
]
124020023
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ogo04054
]
124020023
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
124020023
Protein kinases [BR:
ogo01001
]
Serine/threonine kinases: Other
TAF1 family
124020023
Pattern recognition receptors [BR:
ogo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
124020023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
RsgA_GTPase
AAA_16
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-GeneID:
124020023
NCBI-ProteinID:
XP_046191401
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MCQEMEAGLSLASHYVDVRLVQRQILIGSGKNTSKCLEKDLVVIGDAERRRGSLARSQVF
ESSPGAKPKRSIVLLGNAGMGKSTLIKKLCVDWSDGLLPQFDFVFLLDGKALTLPPEPTY
SLRSLLLHLSCPHPRDVFSQVLSVPERVLVIFDGFEVVRDLEGLLQSPADDSEGENYSVR
QLFSGLLQRKLLPGCSLLLSARPRGTVSGLLRRADSLLELSGFSPPDIERYLGQYFSGQS
LEAPTSVPDSIPVPTSVSVPVPVPVPVSVPVPVPVPVPVPVPVPVPVPVPVPVPVPVSVP
VLALTRLHSQPFLLSVCWNPALCHMVCLLLEHWDVSESLPSTLTGLCYRVLLLKMRRHTL
KHTLGQTLPQTQTQAHTHTLKHTHGQTLPQTQTQAHTHTLKHSQKHTLKHTHGQTLPQTQ
TQAHTHSLKYTHGQTLPQTQTQAHTHTLKHTHGQTLPQTQTQAHTHTLKHSQKHVLKHTR
NWTRAYIRTRSHTQSQIQLEDEKRRIETREEEEREEKNEEGERKREEGEKEREEMREEEE
REREEGEEEREEENRCVLSELSGLAWQGVKGHSSLLTLTLDNTVCVKLRLFGLTTGLVHS
HWLRGEQGRDGDNILSWAHPFLQSFLGGAHLSVSSCVSDRALLAQILPQPRGRRRPQGEC
LDLAQRFAVGLLFRNNADLRDLATLDTGAMKVVAAKRAAVILHLESLHHGDLSPARLLEA
CHCVYETGDVRLVRHLVRNLPEVLSFQGVPLCPADAFVVWNLLDQCRTLRRRFCLGLEDT
GLRMTGLKLLTGLSNIHSYRACIADTITLWEELEQSGEEELLKATVSKLTLNPFRATQVS
HVQHLSTLVNIHTSRRLSESQSDGVLGEGLPAVRDLHKLEFELGPVNGPLALPKLLELLP
ALHSLHHLDLENSRLGDSGAEGLAGAVLSLSSLQIINLSQNCIGDQGIESLAPALSTIPS
LHCLSLYSNVISDXGAESLAAVLPQMTSLSDLDVKYNSFTALGAQNLASSLRDCPWIKSL
GMWNVCIPYGVLERLQQQDPRIQLL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtgccaggagatggaggcgggccttagcctggcgtcccactatgttgacgtgcgattg
gtccagaggcagatcctgattggctcagggaagaacaccagcaagtgcctggagaaagat
ttggtcgttatcggagacgcggagaggaggcggggctcgttggccaggagtcaggtgttt
gagagctcccccggggcgaaacccaaacgttccatcgtgttgctaggcaacgccggcatg
ggcaaaagcacgctcatcaagaagctctgcgttgattggtccgacggcctcctgcctcag
tttgactttgtgttcctactggacggtaaggctctgaccctcccccctgagccgacctac
agccttcggtccctcctcctacacctctcctgcccccacccgcgggatgtcttcagtcag
gtcctctctgtcccggagcgtgtgctggtgatattcgatggcttcgaggtggtgcgtgac
ttggaggggctgcttcagtctccagcggatgacagtgaaggggagaactacagcgttaga
cagttgttctctggtctgctccaaaggaagctgctaccaggctgctctctgctcctctct
gcccgaccacgaggcaccgtcagtgggctgctgagacgggctgacagcctcctggaactc
tctggcttctcccctccggacatcgagagatacctgggacaatacttctctggacagtcc
ctagaggccccaacctcagtcccagactcaatcccagtcccaacctcagtctcagtccca
gtcccagtcccagtcccagtctcagtcccagtcccagtcccagtcccagtcccagtccca
gtcccagtcccagtcccagtcccagtcccagtcccagtcccagtcccagtctcagtccca
gtcctagccctcaccaggctccacagccagccgttccttctgtctgtgtgttggaaccca
gctctgtgtcacatggtctgtctgcttctagaacactgggatgtttctgagtcactcccc
tccacgctgactggactgtgttacagggtgttgctactaaagatgagacgacacaccctt
aaacacacactcggtcaaaccctaccccaaactcaaacccaggcacacactcacaccctt
aaacacacacacggtcaaaccctaccccaaactcaaacccaggcacacactcacaccctt
aaacacagtcaaaaacacaccctgaaacacacacacggtcaaaccctaccccaaactcaa
acccaggcacacactcacagccttaaatacacacacggtcaaaccctaccccaaactcaa
acccaggcacacactcacaccctgaaacacacacacggtcaaaccctaccccaaactcaa
acccaggcacacactcacacccttaaacacagtcaaaaacacgtccttaaacacacacgc
aactggacacgagcgtatatccgcactcgctctcacactcaatcccaaattcaattagaa
gacgagaagaggaggatagagacgagagaggaggaagagagggaggagaagaatgaggag
ggagagagaaagagggaggagggagagaaagagagagaggagatgagggaggaggaagag
agagagagggaggagggagaggaagagagagaggaagagaacaggtgcgttctgtcagag
ttgagcggtctggcttggcagggggttaaaggtcattcatctctcctgaccctgactctg
gacaataccgtctgtgtcaagctgcggttgtttggcctgacgactggactggtccattct
cactggctgaggggggagcagggcagagatggtgacaacatcctgtcctgggcccaccct
ttcctgcaaagcttcctgggcggggcccacctgtccgtctccagctgtgtgtctgaccgc
gctctgctggcccagatcctaccacagcccagggggaggcgacggcctcagggagagtgt
ctggaccttgctcagcgattcgctgtcgggctgcttttccggaacaatgcggacctccgg
gatctggccaccctggataccggcgccatgaaagtggtggcggccaagcgagccgctgtg
atattacacctggagagccttcaccatggcgacctgagccccgctcggctcctggaggcg
tgtcactgcgtttacgagacaggcgacgtccgcttggtcaggcacctggtacggaacctt
cccgaggttctgtcgttccaaggggttccgctgtgccccgccgacgccttcgtcgtgtgg
aaccttttggaccagtgtagaacgctgaggaggaggttctgtctggggctggaggacaca
ggactgaggatgacaggattaaaactactgacgggtctcagcaacatacactcatacagg
gcgtgtatcgctgacaccatcactctgtgggaggagctagagcagagtggggaggaggag
cttctgaaagcgactgtgtccaagttgacccttaaccctttcagagccacacaggtgtcc
cacgtccaacacctgtccacactggtcaacatacacacaagcaggagactgtctgagagc
caatcagatggtgtcctgggggagggtctaccggcagtcagagatcttcacaagctggag
tttgagttggggccagtgaatggtcctctggcgctccctaaactcctggagctgctgcca
gccctgcacagtctacatcacctggatctggagaacagtagactgggggacagtggggct
gagggtctggctggagctgtgctgtctctctcctctctgcagattatcaatctgtcccag
aactgtataggagaccagggaatagagagtctggctcctgctctgtctaccatcccctcg
ctgcactgtctcagtctgtacagtaatgtgatatctgacnggggtgctgagagtctggct
gctgttttacctcagatgacatcactcagtgacctggacgtcaagtacaacagtttcacg
gccctgggagctcagaatctggcttccagtctgagggactgtccatggatcaagagtctg
gggatgtggaatgtgtgtattccctacggagtgttagagagactgcaacaacaggaccca
cggatacagctgctctag
DBGET
integrated database retrieval system
