Oncorhynchus gorbuscha (pink salmon): 124020616
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Entry
124020616 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: CXXC-type zinc finger protein 1-like
KO
K14960
COMPASS component SPP1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124020616
03036 Chromosome and associated proteins [BR:
ogo03036
]
124020616
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
124020616
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
124020616
COMPASS/SET1 complex (yeast)
124020616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
124020616
NCBI-ProteinID:
XP_046191810
LinkDB
All DBs
Position
LG03:48837615..48848997
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AA seq
571 aa
AA seq
DB search
MDSELSDFEPAPGLVSTMEGEKAPVYCICRKPDINCFMIGCDNCNEWFHGNCINLTEKMA
KAIRQWYCLRCQDDNPSLEIKYRPKKSREKEAESQRESERNFERQNSTPDYKSEKCRGSN
VKRSARMCGECEPCLRTEDCATCDFCKDMKKFGGPNKIRQKCRFRQCDVRARKMLRVKDE
EFNLRERRDNSYHRRRRYSDDYDSEAELYEKYKAAGYDENMPWLSNEEDGPPFSPVRRKK
AVKVKHVKRRENKFDKKKESRRHKQKQKHKDKLRHDNKGDARDGGGQRQCLGPXCVEAAC
ANSKYCSEECGIKLAANRIFEILPQRIQQWQQSPCVAEEQGKKQLERIRRDQQNARIRLT
DMEKRFHELEGIIAKAKQQVVQQDEEANEGDNEETDLLIFCVSCSHPINPKVALRHMERC
YAKYESQTSFGSMYPTKIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPGDEVCG
CPLVRNVFEVTGEHCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQERNMRTA
MTNRAGLLALMLHQTIQHDPLTTDLRCNKDR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgaattgtcagacttcgagcctgcaccggggcttgtgagcactatggagggg
gagaaggcaccggtgtactgcatttgtcgaaaacctgacatcaattgcttcatgattggt
tgtgacaattgcaatgagtggtttcatggtaactgcatcaatctcacagagaagatggcc
aaagctatcaggcagtggtactgcctgcgatgccaagacgacaacccatcattggagata
aaataccgtccaaagaagagccgtgaaaaggaggcagagagccagagagagtcagagaga
aattttgaaagacagaacagcactccagattataaatctgaaaagtgccgtggatcaaat
gttaagcgctccgctcgtatgtgtggggagtgcgagccctgcttgaggactgaggactgt
gccacatgcgacttctgcaaggatatgaagaaatttggtggtcccaacaaaataagacag
aagtgtcgatttaggcagtgtgatgtccgagccaggaaaatgttgcgtgtgaaggatgaa
gagtttaatttgcgtgaaaggagggataattcctaccaccggcgaagacgatattcagat
gactacgatagtgaggcagaactctacgaaaagtacaaggcggcaggatacgacgaaaac
atgccatggctcagtaatgaggaggacggccctcccttcagccctgtccggcgaaagaaa
gctgttaaggtcaagcatgtgaagagacgtgaaaataaatttgacaagaaaaaagagtca
cggcggcacaaacagaagcagaagcacaaggacaaacttcggcacgacaataagggcgat
gccagagatggaggaggacagcggcagtgtctgggcccangctgtgttgaggcagcatgc
gccaactccaaatactgctcagaggaatgtggcataaagctggctgccaaccggatcttt
gagattctccctcagcgtatccagcagtggcagcagagcccctgcgtcgctgaggagcag
ggcaagaagcaactggagcggatccggagggatcagcagaacgcccgcatacgcctcacc
gacatggagaaacgcttccacgagctggagggcatcattgccaaggccaagcagcaggtg
gtccagcaggatgaggaggcgaatgaaggggataatgaagaaacagatctgctgattttc
tgtgtgtcctgcagtcaccctatcaacccaaaagtggcattgcgacacatggagagatgt
tatgctaagtatgagagccagacttcttttggttccatgtacccaactaagatcgaagga
gcaacaagactgttctgtgatgtgtacaatccccagagcaagacctactgcaagaggctt
caggtcttgtgcccagagcattccagggacccaaaggtcccaggggatgaggtgtgcggc
tgtcctctggtccgtaatgtgtttgaggtgacgggagagcactgcagggtttctaagcgc
aaatgtaataagcactacaactgggagaagctcagaagagccgaggtggacctggagcgt
gtccgagtgtggtacaaactagacgagctctttgagcaggagcgcaatatgaggactgct
atgaccaacagggcaggtctacttgctctcatgctgcaccaaaccattcagcatgaccca
ctgacaacggatctccgttgcaacaaggacagatag
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