Oncorhynchus gorbuscha (pink salmon): 124020799
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Entry
124020799 CDS
T07892
Name
(RefSeq) collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ogo00535
]
124020799
Proteoglycans [BR:
ogo00535
]
Extracellular matrix (ECM) proteoglycans
Others
124020799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
VWA_3
Fn3_nematode
DUF4959
Motif
Other DBs
NCBI-GeneID:
124020799
NCBI-ProteinID:
XP_046192026
LinkDB
All DBs
Position
Unknown
AA seq
1796 aa
AA seq
DB search
MPLKTWRGGRRGESTLPLRLDDTGGTEEINEISGADPFVCTTQAIADIVILVDGSWSIGR
LNFRLVRMFLENLVSAFSVGIDQTRIGLAQYSGDPRIEWHLNAFTTKDAVLDAVKNLPYK
GGNTLTGLALTYILENSFKPESGARSGVPKVGILITDGKSQDDVIPPAQSLRDAGIELFA
IGVKNADENELRAIASEPDNTHVYNVADFSIMSSIIEGHSTQIVCELVEEQDKEIKGESA
GQETQGAPQDLLTSEVTARSFRVSWSHAPGSVEKYRVVFYPATQGGRPEEAVVDGTENSV
VLRYLNSLTEYQLAVFAVYTSSASEALRGSETTLALPMVNGLELYDVTHNTMRARWSGVQ
GVSGYMVLYAPLTKDQASDEKEMKVSDAVTDLQLEDLTPATEYTVTVYAMYGEETSDPTS
SQQTTLPLSPPKNLVFSEVDHNSAKLSWEAASRKVTGYRIMYVKTDGLKTDEVDVGPVTS
WTLNDLTSATEYEVAIFGIYDEGQSEALSGSFTTDPVPGPLDLQTNEVTAESFRVSWGHS
APGIVLYKLTWAPYGGGDTKEMALSGDVDSFLLSGLSPNTEYEVMLQAVFKDQSESDAVL
VVETTLARTTTVATTTPVVRQAVSGLQVQEETTYSLEVSWQLEDPKVAQYRVTYVSLTGD
RNEESVLVPGQQTTVLLQPLLSDTEHKVTVTPVYTDGQDGISVSSVGRTLPLSAPSNLRV
SEEWFSRFRITWDTPPSPTLGFRVVYQPTSVPGSALETFVGDDVNTMLILNLQSDTEYTV
KVISSYTTGSSQPLQGTAKTLYLGVTNLNTYQVMMSSMCVQWQPHRQADLYRVVIESLLN
GQKQEVSVGGSASRQCFYDLTPNSIRFLQDMEGPAVPTDLNTLITDTTLPAPTQPPTPPP
TSPLPTIPPAKEVCKAAKADLVFLVDGSWSIGDDNFQKIIRFLYSTMGSLDLIGPDGTQV
AIAQFSDDARTEFKLNSYANKETLLDAIRRITYKGGNTKTGRAIKHVKESIFTSEGGVRR
GVPKVLVVLTDGRSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKPSDRHVFFV
DDLDAVKKIEEQLITFVCEAATATCPSVLMSGNTMAGFRMMDMFGLVEKEYSNVEGVSLE
PGSFNSFPCYRLHKDALVSQPTKYLHPEGLPSDYTITILFRLLPDTPQEPFALWEILNKD
NEPLVGVILDNGGKTLTFFNHDYKGDFQTVTFDEPDIKKMFYGSFHKLHMAISKTTARVV
VDCKVVGGKPINAAGNISIDGVEVLGRMVRSRGKRDNSAPFQIQMFDIICSTSWASRDKC
CELPGMRLEEDCPAMPHACSCSQDSKGPPGPTGPPGGAGIRGTRGDRGEPGNVGPQGLVG
DKGPPGPQGPPGPQGPSGHSIQGPPGGDGEKGEKGDVGLPGPQGVGGSPGGSGRDGPVGQ
RVTVYSFCLTYRFIISIMYCYICHLADAFIQSDLQSCVHTLYVWVTDESNTGCYINRTVL
GSTYLTLSHLKAQGYVCIHAMDNDGDDDDDDDDGDDDDGDDDGDDDYDGDDGDDDDDDDD
GDDDGDGDDDGDGDYDGDVDHLSLHQGSPGAPGAPGGSGSPGPLGDQGPPGSAGTKGDKG
ERGDLQSQATVRALARQVCEQLIQSHLSRYSSILNQIPSQSVSVRTVPGPPGEPGRRGLP
GPQGEGGPTGRPGFPGTNGQDGRPGERGLPGEKGERGSQGVGTQGPRGPPGPPGLLGEGR
TGSQGPAGRPGNQGTPGRPGTPGSTGPAGAAGYCDQNSCLGYNVGGGQEQEYENDY
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgaagacctggaggggagggaggagaggggagagcacattgcctctgagactt
gatgacaccggagggactgaggagatcaacgagatatctggagcggatccttttgtctgt
acgactcaggccatagctgacatagtgatcctggtggatggatcctggagcatcgggagg
ctcaacttccgcttggtccgcatgttcctggagaacctggtcagcgctttcagcgtcggg
atcgaccagaccaggataggtctggcccagtacagtggggaccccaggatagagtggcat
ctgaatgccttcaccactaaagatgcagtcctggatgctgtgaagaacctgccctataag
ggaggcaacacactgacaggcctggcgctgacctatatcctggagaacagcttcaagccc
gagtcaggcgccaggagcggggtacccaaagtcggtatcctaatcacagatgggaagtcc
caggatgacgtgatcccccctgcccagagcctgagggacgctggcatcgaactcttcgcc
attggtgtaaagaatgctgatgagaatgagctgagggctatagcttctgagcctgacaac
actcatgtgtacaacgtggcagacttcagcatcatgagctctatcatagagggacacagt
acccagatagtctgtgaactggtagaggagcaggacaaggagatcaaaggagagtctgca
ggtcaggagacacagggagcccctcaggacctattgacatcagaggtgacagccaggagt
ttcagggtgtcctggagtcacgctcccggcagtgtagagaagtaccgtgtggtgttctac
cctgctacccagggaggacggcctgaagaggctgtggtggacggcacagagaactctgtg
gttctgcggtatctcaactccttaacagagtaccagttagctgtgttcgctgtctacacc
agctcagcgagcgaggcacttcgtggcagcgagaccacattggctctccccatggtgaac
ggcctggagctgtacgacgttacccacaacaccatgcgggcgcggtggagcggtgtgcag
ggcgtctcggggtacatggtcctatacgcccccctgaccaaggaccaggcctccgacgag
aaagagatgaaggtgtcagacgcagtaactgatctacagctggaggacttgactcctgcc
actgagtacacggtgacagtctacgccatgtatggagaagaaaccagcgatcctacgagt
agccagcagaccaccttgccattgagccctcccaagaaccttgtgttctccgaggtggac
cacaactcagccaaactgtcgtgggaagctgcctctaggaaggtgacaggataccgcatc
atgtacgtcaagactgacgggctaaagactgatgaggtggatgtgggtccagtcacgtcc
tggactctgaatgacctgacgtctgcaacggagtatgaggtagccatatttgggatctac
gacgagggccaatcagaagctctctctggcagcttcaccaccgaccctgtgccaggacct
cttgacctccagaccaatgaggtcaccgcggagagcttccgggtcagctggggtcactct
gctccgggcatcgtcctctacaaactgacctgggctccttatggtggaggggacactaag
gagatggctctaagtggtgatgtggactccttcctcctcagtggactgagccctaacaca
gagtatgaagtgatgctccaagccgtcttcaaagaccaatcagagagtgatgcggtgtta
gtggtggagacgacacttgccaggacaacaacggttgccactacaacgccagtggtgcgt
caggcggtgagtggcctgcaggtccaagaggagaccacctacagcctggaggtgtcatgg
cagctggaggatcctaaggtggcccagtacagagtcacctacgtcagcctcacaggagac
cgcaacgaggagtcagtcctggtgcctgggcagcagaccacagtccttctccagcctctg
ctgtctgacacagagcacaaggtgacggtcaccccagtctacacagatggacaggacggc
atcagtgtttcttcagtgggcagaacattgcccctctcggcgcctagcaacctgagggtg
tctgaggagtggttcagtcgcttccgcatcacctgggacacgcctccttctcccacgttg
ggcttcagggtagtctaccaacccacctctgtgccggggtcagctctggagacctttgtg
ggagacgacgtcaacaccatgctgatcctgaacctgcagagtgacactgagtacactgtg
aaggtcatctcttcctacaccacgggatccagccaacctctccagggcaccgccaagaca
ttgtacctgggcgtgaccaacctgaacacctaccaggtgatgatgtccagtatgtgtgtt
cagtggcagccacatcgtcaggctgacctctacagggtggtcatcgagtctctgctcaat
ggccagaaacaggaagtgagtgttggaggctctgcgtctagacagtgtttctatgatctg
acccctaacagtataagatttctacaggacatggagggacctgccgtaccaactgacctc
aacactctcatcacagacacaacactccccgcccccacccagccaccaacaccacccccc
acgtcccccctaccgaccataccgcccgccaaggaagtctgtaaggcagccaaagctgac
ctggtcttcttggtggacgggtcttggagcatcggagacgacaacttccagaagattatc
cgcttcctgtacagtacgatgggatctctggatctgattggtcctgacggcacacaggtt
gctatagcacagttcagtgatgatgccaggactgagttcaagctgaactcatacgctaac
aaggaaacgctgctcgacgccatcaggcgaatcacatacaagggagggaacaccaagaca
ggccgggccattaagcacgtgaaggaatctatcttcacctcagagggaggagtgaggagg
ggggttcctaaggtactggtggtcctcaccgatggccgttcccaagacgacgtcaacaag
gtctccaaggagatgcagatggaaggctacatcatctttgccatcggctttgctgatgcg
gactacggagagttggtgaacatcgccagcaaacccagcgacagacacgtcttctttgtg
gacgatttggacgctgtcaagaaaattgaggagcagctgatcacttttgtgtgtgaggct
gcaactgccacttgtccatcggttctgatgagtggcaacaccatggcaggcttcaggatg
atggacatgtttggcctggtagagaaggagtacagtaacgtagagggagtgtccctggaa
ccaggctccttcaacagcttcccctgctacagactgcacaaagacgccctggtctcacag
cccaccaagtatctccacccagaaggtttaccctctgactacaccatcaccatcctgttc
cgcctgctaccagacaccccccaggagccctttgcattgtgggagatcctcaacaaagac
aatgaacccctggtgggggtcatcctggacaatggtgggaagactctgacgttcttcaac
cacgactacaagggagacttccagacagtcacttttgacgagcctgacatcaagaagatg
ttctatggcagtttccacaagctccacatggcgatcagtaagaccacagccagggtggtg
gttgactgtaaggtagtgggaggaaagcccatcaacgcagctggcaacatcagtatagac
ggggtggaggtactgggacgcatggtacgatccagagggaagagagacaactcagctccg
ttccagatccagatgtttgacattatctgcagcacgtcctgggccagtcgagacaagtgc
tgtgagctccctggaatgaggctggaggaggactgtcctgccatgccccatgcctgtagc
tgttctcaggacagtaaaggacctcccggacccacaggacctcccggaggtgctggtatc
agagggaccaggggagatcgaggggagccaggcaatgtggggcctcaaggactagttggt
gataaaggtcctcctggaccacagggcccccctggtcctcaagggcctagtggacattcc
atccagggaccaccggggggtgatggtgaaaagggagagaagggagatgttggtttacca
ggacctcagggtgttggtggatctcctggcggatccggaagagatggaccagttggacag
agggtaacagtctattcattttgtttgacttacagattcattatttccattatgtattgt
tatatatgccatttagcagacgcttttatccaaagcgacttacagtcatgtgtgcataca
ttatacgtatgggtgactgacgaaagcaacacaggctgctacatcaacaggacggtttta
gggtcaacttacctgacattaagtcacctgaaggcccaaggatatgtatgtatacacgcc
atggataatgatggtgacgacgatgatgatgacgatgatggtgacgatgatgatggtgac
gatgatggtgacgatgattatgatggtgatgatggtgacgatgatgatgatgacgatgat
ggtgacgatgatggtgacggtgatgatgatggtgacggtgattatgatggtgacgttgat
catttgtctctccaccagggcagtcctggagcccccggggcccctggtggaagtggctct
cctggaccgctgggagaccagggaccacctggctctgctggtaccaaaggagacaagggt
gaacggggagacctgcagtctcaagctaccgtcagggccttagcacgccaagtgtgtgag
caactgattcagagtcacctgtctcgctacagctccatcctgaaccagatccccagccag
tcagtgtctgtgaggacggtaccgggacctccaggagagcccggtcgcaggggtctgcca
gggccacagggagagggggggcccacaggcagaccagggttccctgggaccaacggacag
gatggacgaccgggggagagaggtctcccaggagagaagggggagagggggagtcaaggt
gtggggacacagggccccagaggtcccccaggaccaccaggtcttctaggagaggggcgt
acaggcagccaaggccccgccggtagaccaggcaaccagggtaccccagggcgaccaggc
acccctggatccacgggccctgctggtgctgctggctactgcgaccagaactcctgtttg
ggctacaacgttggaggaggacaggaacaggaatatgagaatgactactga
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integrated database retrieval system
