Oncorhynchus gorbuscha (pink salmon): 124021054
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Entry
124021054 CDS
T07892
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124021054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124021054
03021 Transcription machinery [BR:
ogo03021
]
124021054
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
124021054
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
124021054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
POU2F1_C
Homeodomain
Motif
Other DBs
NCBI-GeneID:
124021054
NCBI-ProteinID:
XP_046192326
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MADGGVMSQYESSGPDSIINLSVSSKSTMENGDIVKGVLTNGRDSQKQTVMSLTNAQSQA
LLQQLTLSPAQQQLFLQQAQAQLLAAAVQQHSASQAQNSSTTGAAISASAATPITTQLPL
SQPIHITPLQQQGLQQFVLVQPGHSMATQLQPQFFISQTPQGQPSMFQYHNLLQAQNLLT
QLPQSQANLLQTPTITIAPQPATPTRTVTATPGQLLIHSQTPPPKGLGTPTLEDANDLEE
LEIFSKAFKQRRIRLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLE
KWLNDAENVSSESSPSLSPLGSGHGSPSLASDLNSRRRKKRTSIDTNIRVALEKSFLQQN
QKPSSDEISLIADQLNMEKEVIRVWFCNRRQKEKRINPPSSSAFQKSIFSSPTTASLVNT
VPQTTVTVTPSLPVTSFSLTDRTLVPATGNTASVISSTPTVPSMSLTPSSSVTTMSQPAV
TMTQAGQMLYSNGGGLAAMAAAAAGISPGLMPSSQFNTGGALLNLTTAGFGGALATIQGV
LSALASSGSFPITTLDGNGNLLFANTSMSGSAPSMVNTPLFLNPQSLSLLGSNPVSFIPA
SALSLQLTAGTNTITTATTPVNTIVRASKAQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggaggagtaatgagccaatatgaaagttcaggaccagactcgataatcaac
ctgtcagtgtccagtaaaagcaccatggagaacggggacatagtcaaaggcgtgctgacc
aatggccgggactctcagaagcagactgtcatgtccctcaccaacgcacagtcacaggct
ctgctgcaacagttgaccttgtctccagcacagcagcagctgtttctccagcaggctcag
gcccagctccttgcagcagccgttcagcagcactccgccagccaggcccagaacagcagc
accacgggggccgccatctctgcctccgcagccacccccatcaccacccaactaccactg
tcccagcctatacacatcactcctctccagcagcagggcctgcagcagtttgtgttggtc
cagccaggtcattccatggccacccagctacagcctcagttcttcatctcccagactcca
cagggacagcccagtatgtttcagtatcataatcttttgcaagcccaaaatcttctcact
caactacctcagagccaagccaacctcctacagactccaactatcacaattgccccacag
ccggccactcccacgcggaccgtaactgccacccctggccagctcctcatccacagccag
accccgccccctaagggtctgggcacgcccactctggaggatgccaatgatctggaggag
ctggagattttctccaaggccttcaaacagaggaggatcagactgggcttcacacagggt
gacgtggggctggccatggggaagctgtatggtaatgacttcagccagaccaccatctcc
cgctttgaagcactcaacctgagcttcaagaacatgtgtaagctgaaaccgctgctggag
aagtggctcaacgacgcagagaatgtgagctcagagtccagccccagcctcagtcccctg
ggctctggtcacgggtcacccagcctggcgtctgacctcaatagccggcgccgcaagaag
aggaccagcatcgacaccaacatccgtgtggccctggagaagagcttcctccagcaaaac
cagaagccgtcgtcagacgagatctccctgatagcagaccagctgaacatggagaaggag
gtgatccgggtgtggttctgtaaccgccggcagaaggagaagaggatcaaccctcccagc
agctcagctttccagaagtccatcttctcgtcccctactactgccagcctggtgaacact
gtaccccagaccactgtgactgtcaccccctctctgcctgtcaccagcttcagcctcaca
gacaggaccctggtgccagccaccggcaacacagcatccgtcatctccagcacccctaca
gtcccctctatgtccctcacaccctcctcctccgtgacaaccatgtcacagccagccgtt
accatgacgcaggcggggcaaatgctctacagcaacggcgggggtctggctgcaatggca
gctgcagcggcgggaatcagcccgggtctcatgccttcatcgcagttcaacacagggggg
gccttactgaacctaactactgcaggttttggaggagcgctagccaccatccaaggtgtg
ttgagtgctctggcctccagcgggtccttccccatcaccaccctggacgggaacgggaac
ctgctatttgccaacaccagcatgtctggttccgcccccagcatggtgaacacgccactc
ttcctgaacccccagagcctgtccttattgggtagtaaccctgtcagcttcatccctgcc
agtgccctcagcctgcaactcaccgctggcaccaacaccatcaccacggcaaccacacca
gtcaacaccatcgtcagagcctctaaggcccaatga
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