Oncorhynchus gorbuscha (pink salmon): 124021115
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Entry
124021115 CDS
T07892
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
ogo04517
IgSF CAM signaling
ogo04530
Tight junction
ogo04810
Regulation of actin cytoskeleton
ogo05100
Bacterial invasion of epithelial cells
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124021115 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124021115 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
124021115 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124021115 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124021115 (arpc1b)
05100 Bacterial invasion of epithelial cells
124021115 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124021115 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124021115 (arpc1b)
Membrane trafficking [BR:
ogo04131
]
Others
Actin-binding proteins
Arp2/3 complex
124021115 (arpc1b)
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
124021115 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
eIF2A
Rax2
Beta-prop_TEP1_2nd
PEP5_VPS11_N
EIF3I
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
124021115
NCBI-ProteinID:
XP_046192400
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MSYHSFLLEPISCHSWNKDRTQIALCPNNHDVHIYKKDGTKWTKIHELKEHNGQVTGIDW
APDSNRIVTCGTDRNAYVWSLKGEVWKPTLVILRINRAARCVSWSPKENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTVWGSKMPFGEVLFESGPSGVSGGAGDRAGGGWVHGVCFSHSGNRLAWTSHDSTVAIA
EGGKTSTISSLSSETLPLLCVSFITENSLVAAGHDCYPVLFVYDGTKGSVTFGGKLDVPK
QTSQRGISARERFQNLDRRATSSETTEQGLESLHKNSISQISVLEGGKSKCSTFCTTGMD
GGMVTWDVKSLESALKDLKIV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccacagcttcttgctcgagccaatcagctgccactcctggaacaaggaccgg
acacagattgctctgtgtcccaacaaccacgatgtccacatctataagaaggacgggacc
aagtggaccaagattcatgaactgaaggagcacaacggacaggtcacaggtatagactgg
gctccagacagtaaccgtatcgtgacctgtgggacggatcgtaacgcgtatgtctggtct
ctgaagggggaggtgtggaagcccaccctggtcatcctccgtatcaaccgggctgctcgc
tgtgtcagctggtctcccaaggagaacaagttcgctgtgggcagcggatcacgcctcata
tccatctgctactttgaacaggagaatgactggtgggtctgtaagcacatcaagaagccg
atccgctccaccgtcctcagtctggactggcatcctaacaacgtgctgctggcggctgga
tcctgtgacttcaaatgcagggtgttctcggcctacatcaaggaggtggaggagaagccc
ggacccacagtgtgggggtccaagatgccatttggagaggtgctgtttgagtctgggccc
tcaggggtgtcaggaggggctggagatagggcaggagggggatgggtccacggggtctgt
ttctcccacagcgggaaccgcctggcctggacgtcacatgactcgactgtggcgatcgca
gagggaggcaagaccagcacgatcagcagtctgagctctgagacccttcctctgctgtgt
gtcagctttatcactgagaacagcctggtggccgctggtcatgactgctacccagtgctg
tttgtgtatgacggtactaagggctcagtaacgttcggagggaagctggacgttcccaag
cagacgtctcagagagggatcagcgccagggaacgcttccagaacctggaccgccgagcc
acctcgtctgagaccaccgagcagggcctggagagtctgcacaagaacagcatcagtcag
atctctgtgctggaaggagggaagagtaaatgttccacgttctgtacaactgggatggac
ggaggaatggtgacatgggacgtcaagagtctggagtctgctctgaaggatctcaagata
gtctga
DBGET
integrated database retrieval system
