Oncorhynchus gorbuscha (pink salmon): 124021189
Help
Entry
124021189 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: ras and Rab interactor 2-like
KO
K23687
Ras and Rab interactor 2/3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124021189
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124021189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
Lpg0393_VPS9
RA_2
RelB
Motif
Other DBs
NCBI-GeneID:
124021189
NCBI-ProteinID:
XP_046192492
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MDRSGSFFKDSDGLTDSDLSMSATLPRPDCHTDRRGSFFKLIDTFALEIGELKQEMVQTS
PTEDKDPYPMVLQGLEGEVSGVYLQSSPCASASGERDSGYDSLRRRMSVLDRLRHTHPVW
LLLTLSDKEATRILLQQPPGVFLVRKSSTLQRKVLSLRVSDDDASGGAGVCDFPVTESQY
TFSLEGSGISFADLFRLVAFYCISRDVLPFTLNLPEAIAASKTQKDLEEVAQLGAGFWHS
ALGSLRRTTTPSRPPPQRPDRDGDIQGAERTQEKQSATRPPSSSSSSRLERSQSNGALCF
VNPLFLQTHRRLEEDPQSSSTSPSPYATHSTPSPGTTGGTSSAPVTDPNVKRKSRPPRPP
PPFPPIPTPRSLSQRRQAPPPPPLFPKSPRAACPKRTAIVVARQPLQPSSNQNLRPTPRP
PMGARHTSHSKKTTSSAAIPVPHQHPQHPPPPRPKKPDIDAHRCHIALDDETIAKALSRA
KLPPCQAPAIPVPSIVGNGAGSPPSPPGKTPRREGQEGRLSDMSISTSSSDSLDYSHPPL
SLPASPPLRLRHHLGNNEDSSDDEDLCDEEEEDYGVSLENDLDQGLRPPFKARRRGVGVG
VKVALSFRKVSGVFSTFMTPERRAVRRIAELSRDKSSYFGCLVQDYINFVQENKGCHTSG
LDLLQTLRQFMTQMKAYLTQSSELDPPIESLIPEDQIDSVLEKAMHKCVLKPLKGVVEVA
LHDFQVSSGGWQQLRENLALAKTRRPQDLGVDGAVPPDPMAIEKIRHKFHNMRKMYSPDK
KVSLLLRVCKLIYTIMQDNSGRMYGADDFLPMLTYVLAQCDMPQLDTEILYMMELLDPTL
LHGEGGYYLTSAYGAMALIKNFQEEQAARVLSSEARDTLHQWHRRRTAQRTAPSVDDFQN
YLRVALQEVNSGCTAKTLLVHPYSTTEEVCSLCAYKFNVHDPENHALFLITEATCQQLAP
DTHPQRIKAEIHSHPNSQPFHFVYRRVPNLNLCIPAVSANQHNGNCQAKWMN
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagcgggagcttctttaaggactcagacggtctcacagactcagacctaagc
atgtctgctacgctgcccagaccagactgtcatacggacaggagaggaagcttctttaag
ctgatagacacgtttgcgttggagataggggagctgaagcaagagatggtccagacctcc
ccaacagaggacaaagacccataccctatggttctacaggggttggagggggaggtgagt
ggggtttacctccagtcgtcgccctgcgctagcgccagtggtgaaagggattctgggtac
gactccctgcgtaggcggatgagcgtgctggacagactgaggcatacgcaccccgtgtgg
ctactgctcacgctcagtgacaaggaggccacgcgtatactgctgcagcagcctccaggg
gtattcctggtgaggaaatcatccactcttcagaggaaagttctgtctctaagggtcagt
gacgatgacgcctcaggaggagccggcgtctgtgacttccctgtcacagagagtcagtac
accttttctctggaaggatctgggatcagttttgcagacctgtttcgcctggtggccttc
tactgtatcagcagggacgtccttcctttcaccctgaatctcccagaagccattgcagcc
tccaagactcagaaagacctggaggaggtggcccaactaggagcaggattctggcactct
gctctaggcagcctgcgaaggacaaccactccctctcgccctccaccacagcgccctgac
agagacggtgacatccagggtgcagagaggacacaagagaaacagagtgcgactcgtccc
ccttcctcctcctcctcctctcgcctggagagaagccagtccaacggggctctttgcttc
gtcaaccccctcttcctccagactcaccggcggcttgaggaagaccctcaatcctcttcc
acctctccttccccgtacgccacacactccacccccagcccgggaactaccggtgggacg
tcttcggcccctgtcacggaccccaacgtgaaaaggaagtcacgcccccctcggcccccg
cccccgttccctcctattcccaccccccgttctctctcccagcgccgccaagctcctcct
cccccacccctcttccccaaaagcccaagagcagcatgcccaaaacgcacagccattgtt
gtcgccaggcaaccactgcaaccctcatccaatcagaaccttcgccccacccctcgccct
cccatgggtgccaggcacaccagccattccaaaaagacgacgagcagcgccgccatccct
gtgccccaccaacaccctcaacaccctcctcccccacgccccaaaaaacctgacatcgac
gcccaccggtgccacatcgctcttgatgacgagactatcgccaaggctctgtcccgtgcc
aagcttcccccgtgccaggcaccggccatacccgttccctccatagtgggaaatggtgct
ggtagccctcccagccctccgggtaagacccccaggcgagagggacaagaggggaggctg
agcgacatgtccatctctacctcttcctcagattctctggactactcccaccctcccctc
tccctccccgccagcccccctctcagattacggcatcaccttggcaacaacgaggacagc
agcgacgacgaagacctctgtgacgaagaagaggaagactacggcgtcagcctggagaac
gacctggaccagggcctccgtcctcccttcaaagcccgccggagaggggtcggagtcggg
gtcaaagttgcgctgagcttccggaaagtttctggagtcttcagcacgttcatgacccca
gaaaggcgagctgtgaggaggatagcggagctctccagggacaaaagttcctacttcgga
tgcctggttcaggattatatcaattttgtacaggagaataaggggtgtcatacatcaggc
ttagacctcctgcagaccctcagacagttcatgacccagatgaaggcctacctgacgcag
agctccgaactggacccgcccatcgaatccctcatacccgaggatcagatagactctgtc
ctggagaaggccatgcacaaatgtgtgttgaagccgctgaagggcgtagtggaagtggcc
ctgcacgacttccaggtgagcagtggaggctggcagcagctgagggagaacctggccctg
gctaagacccggaggcctcaggacctgggtgtggacggggccgtgccccctgaccccatg
gccatcgagaagatccgccacaagttccacaacatgaggaagatgtactccccggataag
aaggtgtcgctgctgctccgagtgtgtaaactcatctacaccatcatgcaggataactca
gggaggatgtatggagcagatgacttcctaccgatgctgacctatgtcctggcccagtgt
gacatgcctcagctggacactgagatcctctacatgatggagctgctggatcccacactg
ctacatggagagggtggctactacctgaccagtgcgtacggggccatggctctcatcaag
aacttccaggaggaacaggcagccagggtcctcagctccgaggccagagacaccctgcac
cagtggcaccgccgacgcaccgcccagcgcacggcaccctccgtggacgacttccagaac
tacctgcgagtcgccttacaagaagtcaacagcggctgcacagccaaaaccctcctagtc
cacccgtactccaccaccgaagaagtatgctcgctctgcgcctacaagttcaatgttcat
gaccccgagaaccacgccctctttctcatcactgaggcaacctgtcagcagcttgccccg
gacacacacccccagcgaatcaaagcggagatacacagccacccaaactcgcaacccttc
cattttgtctaccgcagagtgcccaaccttaacctgtgtataccagctgtctcagctaac
cagcacaatggcaactgccaagccaaatggatgaattaa
DBGET
integrated database retrieval system
