Oncorhynchus gorbuscha (pink salmon): 124021442
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Entry
124021442 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 8-like
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137
Mitophagy - animal
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124021442
04137 Mitophagy - animal
124021442
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124021442
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124021442
04121 Ubiquitin system [BR:
ogo04121
]
124021442
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124021442
Peptidases and inhibitors [BR:
ogo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124021442
Membrane trafficking [BR:
ogo04131
]
Endosome - Lysosome transport
Others
Others
124021442
Ubiquitin system [BR:
ogo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124021442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Motif
Other DBs
NCBI-GeneID:
124021442
NCBI-ProteinID:
XP_046192587
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MPAVSRGAKDLYLSTNLGDLNKKAEVKPDKINTRSYVQSACKIFKAAEECRLDGDEEKAY
VLYMKYLTVYDLIKKRPDFKQQQEFFLSVLXPTSFKKAIEEAEKLSESLKLRYEEVEVRK
KLEEKERQEEKKRREDKTEKDGGRASPKAGKEIKKVKEQKELKNLTSKAAVSAGGITAEG
LFKMMRDQAITVIVMDARCLRDFQDSQIQVPTQTVISVPEEAINPGITVNQIEANLPDAS
RETWKRRGFVDYIILLDWFSSVTDLKLGSTLQSLKDALFKWDSTTILRSEPMVLEGGYES
WLLFYPMYTSNAKVRPPRTHSYSTLPQLNFSYPSLEEPKPPTLLPRVNGAPLEELTPSTW
MEADATDSPHTGFTHPGVDHSKKDPGAGPGTPSQPGGTAKHIPQPAVPLTDEERGQIHTE
TAALMEKARREQEQRKQERRTEEEWRERERREKENEEMERRKEEENRTQERKRLERHKAE
EEKENGVREEREKGKEQREDTPTNGDSLDSPAPNRIVTEIKAPSPMKLSGDVKRSRQPGT
LKHRTVDDYVIPKRELLTRARSEEMGRSVPGLPVGWMKFLDTVTGTYRYYHSPTNRVHRY
PPEVSVPQTPPXTPPTAKQKQPRPAEPDQTMDRDQEQSKLKRSYSSPDISQDLREEGLKK
VTAPITAATRPTFNRETKPSTASVYTKVEIARPSAAKIRNLNPVFGGLGASLTGLRNLGN
TCYMNSILQCLCNTPAMVDYFNKNLYQEDINRANILGHRGEVAEEFGVIMKALWSGLYKC
ISPXDFKVTIGKINESFSGHEQQDSQELLLFLMDGLHEDLNKAANRKGYIEEENDDLDDQ
RAADQAWTKHKLLNESVIVALFQGQFKSTVQCLTCHRKSRTFETFMYLTLPLASTNKCSL
QDCLKLFSKEEKMTDQNKVFCRHCKALRDSVKKLEIWKVPPIILVHLKRFSYEGRWKQKL
QTTVDFPLENLDLSQYVIGPRLGLKRYNLFGVSNHYGGLDGGHYTAYCKNAMKQRWYKFD
DHEVSEISTSTVKSSAAYIFFFSSL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggtgtcccgcggggcgaaggacttgtacctctctactaacctgggggacctc
aacaagaaagctgaggtcaagccggacaaaatcaacaccaggagctatgtccagagtgcc
tgtaagatcttcaaggctgcggaggagtgtcgtctggatggagacgaggagaaggcctat
gttctctacatgaaatacctaacggtttatgatctcatcaagaagaggcccgacttcaag
cagcaacaggagttcttcctgtccgtgttanngcccaccagctttaaaaaagccatagaa
gaagccgagaaactctctgaaagccttaaactcaggtacgaggaagtcgaggttcgcaaa
aagcttgaggagaaagagagacaagaggagaagaaaaggagggaggataagacggagaaa
gatggagggagggcatctccgaaagcagggaaagagatcaagaaggtaaaagagcagaag
gagttgaaaaatttaacttcaaaagctgcggtgtcagcaggagggatcacagcagagggg
ttgttcaagatgatgagggaccaggccattacggtcattgtgatggacgctcgctgcctc
cgagacttccaggactcacagatccaggtccccacccagactgtcatcagtgtcccagag
gaggctatcaaccctggcatcacagtgaaccagattgaggccaatctacctgatgcgtcc
agagagacgtggaagagacgggggttcgtagattacatcatcctactggactggttcagc
tctgttactgacctcaaactgggaagcaccttacaaagcctcaaagatgctctcttcaag
tgggacagtaccactatcctgcgtagtgagcccatggttctggagggaggctatgagagc
tggctcctcttctaccccatgtacacatccaacgccaaagtcagaccgccccgaacacac
agctacagcaccctcccacagctgaacttcagctacccgtcactggaggagcccaaacct
ccaaccctcctcccccgagtgaacggtgcccccctggaggaactgaccccctccacatgg
atggaggctgacgccacagactcaccccacacagggttcactcaccctggagtagaccac
agcaagaaggaccctggagctggtccagggacccccagccagcctggagggacagccaag
cacatcccacagccggcggtgccgctgacggacgaggaacgaggtcagatccacacagag
acggcggctctgatggagaaggcccggagagagcaggaacaacgcaaacaggaacgccgc
accgaggaggagtggagagagagggaacgccgggagaaggaaaatgaggagatggagagg
aggaaagaggaagagaacaggactcaggagaggaagaggttggagagacacaaggcagag
gaggagaaggagaacggggttagggaagagcgagagaaggggaaggagcagagggaggat
acgccgaccaatggtgattctctggactcgccggctcccaaccgtatcgtcacggagatt
aaggctccctcccccatgaagcttagtggtgatgtaaagaggagtcgtcagcctgggacg
ttaaagcatagaacagttgatgactatgtcatacccaagcgggagctcctaaccagagcc
agaagtgaagagatggggaggagtgtaccaggtctgcctgttggctggatgaagttcttg
gatacggtaaccggtacctaccgttactaccattccccaaccaaccgggtgcaccgctac
ccccctgaggtcagcgtgccccagacgccccctnccacccctcctacggccaaacagaag
cagcctcgccccgctgagccagaccagaccatggaccgtgaccaggagcagtccaaactg
aaacgttcctattcttctccagacatcagccaggacctgagggaggaggggctaaagaag
gttaccgcccctataactgcagccacgcgcccaacctttaacagggaaaccaaaccgtcc
accgctagcgtctacaccaaggtggagatcgcccgcccgtctgcggctaagatccgcaac
ctgaaccctgtgttcggcggtctcggcgcctcgctcaccggcctgcgtaacctcggtaac
acctgctacatgaactccatcctgcagtgtctatgtaacaccccggccatggtcgactac
ttcaacaagaacctctatcaggaggatatcaacagggcaaacatcctgggtcaccgaggc
gaggtggcagaggagtttggtgtgatcatgaaggctctgtggtcaggcctgtataagtgt
atcagccccngtgactttaaggtcactatagggaagatcaatgaatccttctctggccat
gaacaacaggactcccaggagctgctgctcttccttatggacggactccacgaggacctc
aacaaggctgctaaccgtaagggttacatagaggaggagaatgacgatctggacgaccag
cgggctgctgaccaggcctggaccaaacacaagctgctcaacgagtctgtcatcgtagcg
ctgttccagggtcagtttaagagcacagttcagtgtctcacctgccacaggaagtcccgc
accttcgagacctttatgtacctgaccctgccgctggcctccaccaacaagtgttccctg
caagactgtctgaagttgttttctaaggaggagaagatgaccgaccagaacaaggtgttc
tgtcgacactgtaaagctctcagagactccgtcaagaaactggagatctggaaggttccg
cccatcatactggttcaccttaaacggttctcgtacgagggccgttggaagcagaagctg
cagaccacagtagacttccctctggagaacctggacctcagtcagtatgtcatcggaccc
agactcggcctcaagagatacaacctgtttggagtgtctaaccattatggcggtctggat
gggggtcactacacagcctactgtaagaacgccatgaaacagcgctggtacaagtttgac
gaccacgaggtctccgaaatctccacctccaccgtcaagtcctccgcagcgtacatcttc
ttcttctcctctctgtga
DBGET
integrated database retrieval system
