Oncorhynchus gorbuscha (pink salmon): 124021909
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Entry
124021909 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124021909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124021909
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124021909
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124021909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
124021909
NCBI-ProteinID:
XP_046192997
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MADVPVPPSSLRTEGILLREIHVNLLECKVCFEKYNPRQKERRPQNLSCGHVLCLECVRA
LSHPVLKKLECPFCRQLCDVDSTSHCQALTDLQDLLLSRSPRSPVPHRVRGGSGWVGGLG
SGALRLRSAFGGWGSLINPTGVAVFGSSGTVVVVHDGERRVVVFGPQGRRLHGFGRRGAA
TGEVCHPVDVAVTPSGYVVVTDAGDAAVKVFTTRGSYVLAVWDSFQMPWGVDVDSCGHIL
VTDIQAGTLSQVVVDFARGVTLMNRAVITDLQRPKAVACCRVTGNIALVETLGLTTTQPP
NGPRPTRLTIFNKDFNVLSQIDSFTLSLGASVWPCMSAVAFDRDGDVIVIDSQRGLIWSL
GKLQNGPVLTPLVSGDLVRPVGLVTTAQNTLIVLDSGDHAVKMYSVHSDAILVQK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttcctgttcctccttcctcactgagaacagaggggatcctcttgagagag
atccacgtcaacctgctggagtgtaaagtctgcttcgagaagtataacccacggcagaag
gaacgccggcctcagaacctgtcctgcggccatgtactctgtctggaatgtgtccgggcg
ctctcccaccccgtcctcaagaagcttgagtgccctttctgccggcagctgtgtgacgtt
gacagcacctcccactgccaggcgctgacagacctccaggatcttctgctctcccgctcc
cccaggtcacctgtccctcatcgggtcagaggaggcagcggctgggtcggaggcctgggc
tctggagctctgcggcttcgctcagccttcgggggctgggggtccctgatcaaccccacg
ggggtggctgttttcgggtcctctgggaccgtggtggtggtgcacgatggagaaaggagg
gtggtggtattcgggcctcagggcaggcggctgcacgggttcgggcggaggggtgcggcc
acgggggaggtgtgtcacccggtggatgtggcggtgactcccagcgggtatgtggttgtg
acggatgctggtgacgctgcagtgaaagtgttcaccaccagggggagttatgttctggcg
gtgtgggactccttccagatgccctggggggtggacgtggacagctgtggacatatcctg
gtcactgacatccaggccggaacgctctcccaggtcgtggtggactttgcccgtggcgtg
actctgatgaaccgagcggtcataaccgacctccagcggcccaaggcagtggcctgctgt
cgggtgaccgggaacatcgccctggtggagacactgggtctcaccaccacacaacctcca
aatggcccccggcctaccagactgacaatattcaacaaagactttaacgtgctctctcag
atagacagctttactctgagcctgggggcctccgtgtggccctgcatgtctgctgtggcc
tttgacagggacggggatgtgatcgtgatagactcccagcgtgggttgatttggagtttg
ggaaagctccagaacggcccggtcctaactcccctggtcagtggagacttggttcgcccg
gtggggctggtcaccacagcacagaacacgctgattgttttagacagtggagaccatgca
gtgaagatgtattcagttcactcggatgctattctagtccaaaaatga
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