Oncorhynchus gorbuscha (pink salmon): 124022256
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Entry
124022256 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124022256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124022256
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124022256
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124022256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_11
zf-rbx1
WWE_5
PHD_NSD
zf-UDP
zf-ANAPC11
zf-RING_5
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
124022256
NCBI-ProteinID:
XP_046193151
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MRNMRVEDGRIVSLGFEPISKTKPPTQRTATMLHASAVVVWEWLNEHGRWRPYSPTVSHH
IEAVIRSDPRGGSVVLGQVDNRLSPYILDLQSMHQFRQDTGMIRPVRRSFYDPTSAPGQG
WLWEWENDTGSWTQYDTEVGIAIQTARDRQQPWLDLAPLGFCYLVDLQGMTQVNRQTQRQ
RRIQRRSDVAYPLVSGPVPRNGGGGSGPTGALLGVGVSGINGRAVYTSGGQATMQSLAGQ
PCSCQQCMLVFSVKQSTVRSSTHKLGHRPSKPQSKPPSPKSATLGRGQLRSSPARSAYSK
TLPHGLSISRNQSSPRRNAALFARSLSLLSAQTGTLSISNRPPPPSLPPPQPPSSNQGRR
PSVPPPLPPPPATAVTSPPSPVPSPSPRPMAPQRSAACSAPLPQRSSLAGLSRPALQRIA
MAQSQALIASGVPTVPVKNLSGNSPVHPALAGITGILMSAAGFPVCLTRPPKLVLHPPPV
SKRDIKPVPGLGHCCRKTTKKQARKGKTTEEVVKQYLQKVRIAPEENCTICMEALGGASG
YKGGDFIGRLAQCGHQYHLQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHV
IPHSLPGHHDCKTIRIIYNVLPGIQGPEHTNTGKPFTARGFPRHCYLPDSEKGRKVLRLL
LTAWDRRLVFSVGTSSTTGELDTVIWNEVHHKTEFGSNLTGHGYPDPSHLDNVLDELKAQ
GITEEEEQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacatgcgtgtggaagacgggcggatagttagtcttggttttgaacccatttct
aaaaccaagcctccaacgcaacgaacggccaccatgctccatgcgtccgctgtggtcgtg
tgggaatggctcaacgaacacgggcggtggcggccctacagcccgaccgtctcccaccac
atcgaggcggtgatacgaagcgatccccgtggtgggagcgtcgtgctaggccaagtcgac
aaccgcctctcgccctacatcctagacctgcagtcgatgcaccagttcaggcaggacaca
ggtatgatccggccggtgcgccgtagcttctacgatcccacgtcggcgccgggccagggt
tggctgtgggagtgggagaacgacacgggctcctggacccagtacgacacggaggtcggc
atcgccatccagacggcccgggaccgccagcagccctggctggacctggcgccgctgggc
ttctgctacctggtggacctgcagggcatgacccaggtcaacaggcagacccagagacaa
cgcaggatacagcggaggtccgacgtggcctacccactagtgtcaggaccggtacccagg
aacggaggtggaggatcgggtccgactggagcgttactgggtgttggggtgtcgggcata
aacggacgcgctgtgtacacaagcggcgggcaggcgaccatgcagtccctcgccgggcag
ccgtgctcctgccagcagtgcatgctggtctttagtgtgaagcagagcacagtgaggtca
tcgacgcacaagttgggccaccggccgagtaaacctcagagtaaaccacccagccccaaa
tctgccaccctgggacggggccaactcaggagctcccccgctagatctgcgtactccaaa
accttacctcacggactctccatatcccggaaccagtcctcaccgcgacggaatgctgcc
ctcttcgcccgctccctctctctcctcagcgcccaaacgggcaccctctccatctccaac
cgaccccctcctccctccctcccgccccctcagccgccctcctccaatcagggccgccgt
ccgtccgtgccgccccctctccctcctcccccggcgaccgccgtgacgtcaccgccctct
cccgtgccgtccccgtcgccgcggcccatggctccccagcgctcggcggcgtgctctgcc
cccctgccccagcggtccagtctggctgggctcagccggcccgccctgcaacgcatagcc
atggcccagtcacaagccctcattgcctctggcgtgcccactgtcccagtgaagaacctc
agtgggaacagcccggtccacccagctctggccggtatcacggggatcctgatgagcgct
gcggggttccctgtgtgtctcacccgcccacccaaactggtgctgcaccccccgcccgtc
agcaagagggacatcaagcccgtccccggcctgggccactgttgccgcaagaccaccaag
aaacaggcccgcaaaggtaagacaacagaggaggtggtgaagcagtatcttcagaaagtc
aggatagcaccagaggagaactgtaccatctgtatggaggccctcgggggggcgtcaggc
tacaaaggtggtgacttcataggtcgcctggcccagtgtgggcaccagtaccacctccag
tgcctggtggccatgtacaacaacggcaacaaagatggcagcctgcagtgtcctacctgc
aaaaccatctatggcgtgaagacgggcaaccagccgcccgggaagatggagtaccacgtc
atcccccactcgctgcctggccaccacgactgcaagaccatccgcatcatctacaacgtc
ttgcctggcatccagggcccagagcacaccaacacaggcaagccctttacagccagaggg
ttcccgcgtcactgctacctcccagacagcgagaagggacgcaaggtactcagactcctg
ctgaccgcgtgggaccggcgcctggtcttctcggtgggcacgtccagcaccacaggcgag
ttggacacggtcatctggaacgaggtgcaccacaagacggaatttggctccaacctcacg
ggccacggctaccccgaccctagccatctagacaacgtcctggatgaactgaaagcacag
ggcatcaccgaggaagaggagcaatga
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integrated database retrieval system
