Oncorhynchus gorbuscha (pink salmon): 124022365
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Entry
124022365 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
124022365
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124022365
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124022365
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124022365
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Protocadherins
124022365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
124022365
NCBI-ProteinID:
XP_046193248
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MYNKTGPGLSSRGVLWGLCILLLYTSPLCCFANFSQAKELVYKIKEGLPSGTLIGSMGSD
LHLDLSLDPHVLFNLPQKKPSDQYVTLNSTTGQLFTSGNEIDRETLCPDSSSTTXGCVLS
LDVFVLPQQYFQLVKVKILVEDVNDNRPRFPTGEIRVSVPENTQVNARFAVEQSATDPDL
GFHGVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTDELDRERQEEYVTDIIAEDGGLPP
LLGTATLRIIITDVNDNCPQFTESQVNVTLYGNTTKGKHLSRLHAFDPDQGANAVISYAY
SDRVPREARALFHLDRITGVIKLAGQINTATGTFYKLTVLANGPGCVPAVATVTVHVIRV
ASGPPVITPRYIAAEKDGVVTMKESEPPFSPIAFFTVSNTDQRGQGTECLLEGFGPFRLT
PYKRLKNEYLLETTELLDHEQRQDYELTVVLRNPRGLAIKTFVKILVLDENDNAPVFKQS
LYEVSVEENNPPNSFLTQLQATDQDSEARGEVIYTLGSDAPSIFLLERLTGVLTVSTSLD
REEKQTYRFMVRAVDRGTPRRESIATVVITVLDRNDNSPRFINKDFTFFVPENFPGFGEI
GVLSVTDADAGENGWVALSILNGSDIFVIDAGRGALRARTPLDREQQGTYYLWIEAVDGG
EPSLSCLTVVTVLLLDVNDNPPVVLFPQSNQSYMLVLPSTLPGTSITEVYAVDKDTGMNA
VIAYSIIKRKGGEPGSFDIDPDTGNITLKRELSDRGLYSLLVKVSDHGQPEPLHSTVLVN
LFVNETVSNESYIRSLLTGEEAEIQMEEKQWYVGKLTERPGREDLFPCQPLLIALSVTCL
GLFCIVVTLTAYVSCKKLKKWRKRQRKRLEVEMPLKVNGDDADRKRTEISNI
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacaaaacaggaccgggacttagctcgagaggagtactgtggggtttgtgtata
ctcctcctttacaccagccccctctgctgttttgctaatttcagccaagccaaagagctg
gtctataagataaaagaaggattaccgtcggggacactgatcggatccatgggctctgac
ttacacttggatttatccctcgatccccatgttttattcaatctgccccagaagaagccc
agtgatcagtatgtcactctgaacagcactacgggacagctgtttacgtctgggaatgag
atcgacagggagacgctctgccccgactcctcgagtacgaccnagggctgcgtcctctcc
ctggatgtgtttgttctaccccagcagtatttccagctggttaaggtcaaaatcttggtc
gaggacgtcaacgataatcgtccgcgcttcccgacgggcgagattcgggtttccgtcccg
gagaacacccaggtcaacgcgaggttcgcggtggagcagtcagcgaccgaccccgatctg
gggtttcacggggttcagacttactggctggtcaacgactttggggtgttcactctggac
gtagaggagaacgaggggggtgagctgacacccttcctcatcgtgaccgacgagctggac
cgggaacgacaggaggaatacgtaacggatattatagcagaggacggtgggctaccacct
ctccttggcaccgccacgttgaggattataatcactgatgtcaacgataactgtcctcag
ttcacagagtcacaggtcaacgtgacgctctacgggaatacgactaaaggaaagcacctg
tccaggttacacgccttcgaccccgaccagggcgccaacgccgtgatcagctatgcgtac
agcgaccgcgttccccgggaggctagagccctgttccatctggaccggattaccggggtg
atcaaactggccggtcagatcaacaccgcaaccgggacgttctacaaactcaccgtcctc
gccaacgggcctggttgcgtccctgccgtcgccacggtgacggtgcacgtgatccgggta
gcttccggtccgcctgtcattacgccgcgctacatcgcggcggagaaagacggcgtggtc
acgatgaaggagtccgaacctccgttttccccaatcgcgtttttcaccgtgtcgaacacg
gaccagagaggacaagggacggaatgtctacttgaaggattcggcccgttccgactgaca
ccttacaaacggttgaagaacgagtatctgttagagacgacggagctgctggaccacgag
cagaggcaggactacgagctgaccgtagtgctcaggaaccccagaggtctcgccattaag
accttcgttaagatcctagttctggatgagaacgacaacgcgccggtcttcaaacagtct
ctgtatgaggtctctgtggaggagaacaaccctcccaacagcttcctgacccagctccag
gccacagaccaggacagcgaggccagaggagaggtcatctacacgctggggtcagacgct
ccctccattttcctcctggagaggctgaccggcgtgctgaccgtgtccacatctctggac
cgagaagagaagcagacctacaggttcatggttcgggcggtggaccgagggacccccagg
agagagtctatagctacagtggtcatcactgtgctggaccgcaatgacaacagcccgcgc
ttcatcaacaaagacttcacattctttgtgccggagaatttcccgggttttggcgagatc
ggcgtcctctcggtaactgacgcggacgcaggtgagaacggctgggtggccctctccatc
ctcaatggcagcgacatcttcgtgatcgacgcggggcgcggcgctctcagggcccgtacc
cctctggaccgggagcaacaggggacgtactacctctggatcgaggcagtcgacggaggg
gaaccctctctctcctgcctcaccgtggttaccgtcctcctcctcgacgtaaacgacaac
cctcccgtcgtcttgttcccccagtctaaccagtcctacatgctggtgttacctagcacc
ctaccagggacctccatcacagaggtttacgccgtggataaagacacgggaatgaacgcc
gttatcgcctacagcatcatcaagaggaagggtggcgagccggggtcgtttgatatcgac
ccggacacagggaacatcacgttgaagagagaactgagtgaccgcggtctctacagtcta
ctggttaaagtctcggaccacggtcaacccgaacctctccactccacggtcctggtcaac
ctcttcgtcaacgagacggtttctaacgagagctacatccggagtcttctcaccggggag
gaggctgagatccagatggaggagaagcagtggtacgtgggtaaactgacagagaggccc
ggcagggaggacctgttcccctgtcagccgctactcatagctctgtcagtgacctgtctg
ggactgttctgcatcgtcgtcacattgactgcttatgtcagctgcaagaaactgaagaaa
tggaggaaacgtcaaaggaaaagactagaggttgaaatgcctttgaaggtgaacggtgac
gacgcagatagaaagcggacggaaatctcaaacatttga
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