Oncorhynchus gorbuscha (pink salmon): 124022407
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Entry
124022407 CDS
T07892
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124022407
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124022407
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124022407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
HA2_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
124022407
NCBI-ProteinID:
XP_046193297
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MADRSTMSEPDKHLMEKEICSDSETADCAEEAFVFGEDLELNRFDGLPFSSRYYKLLKER
QSLPVWKAREEFLDILVNNRLVIVSGTTKTGKSTQIPQWCAEFCLSAQYQHGVAVSTQIH
SQQAVGLALRVADEMDVNIGHEVGYTIPLETCCSTDTVLRFCTDALLLREMMSDPMLEHY
GAIVIDQAHERTVSTDILLGLLQDILVHRPALRVVILTVSSMTDRLLAHYGSNVPVVSLE
ALCPAEVVYSNCSSKDYFYSALRLVLEIHRTKEEGDVVLFLASAQEVVCARAILQREGTR
LGADLGELVPVVLCPGRGRTPSLLGEGMGSRGTVTTSCRRVFLSTSQGEDMFWAVDSVNF
VIDVGLEKRHVYHPRLRATSEVLRSISRYQADVRKQLIGPTGKCFCLYPKERVLPIETSP
QILDANLTFTILFLKRMEIAGLRHCDFITRPDPEGLMQSLEELDYLAALDDDGNLSEIGI
IMSELPLDAQMAKALLASCEFDCVNEVVTIAAMLSAPSCFLEPPVGRTQEVQQCHRKFWH
PEGDHFTLINIYNAFKYSQRETYFSVEKWCQDYHLNHRALQTADTIRSELTDILKRIELP
ISETSFGTKTNTLNIKRALLAGFFMQIARDVDGSGNYFMLTNRHMAQVHPASSYGAKAHQ
LGFPEWVLFHEYTLSGNHGIRTVSDISPAVFIQTAPQYFYYNLPPSESKDLLQHILDRDG
SGRKDKQQTLTINSKADTDCSTVAQSYDRCVLQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcggatagatcgaccatgtccgagccggacaagcatttgatggagaaagagatttgt
tcggattcggaaaccgctgactgcgcggaagaagcgtttgtcttcggagaggatctggag
ctgaaccgatttgatggattgcctttctcctctcgttattataaactactgaaagagaga
cagtctctgcctgtttggaaagctagagaggaatttttggatatcctggtgaacaataga
cttgttatagtatctggtacaactaaaactgggaaaagtacacagatcccccagtggtgt
gcagagttctgcctgtcggcccagtaccagcacggcgtggctgtgtctacccagatccac
tcacagcaggcggtgggcctggccctcagggtggccgatgagatggacgtcaacattgga
catgaagtgggctacaccatccccctggagacctgctgttctactgacactgtgctcagg
ttctgtacagatgccctgctactgagggagatgatgtctgaccccatgttggagcactat
ggggccatcgtcatcgaccaggctcatgagaggaccgtcagcacagacatactgctggga
ctgctccaggacatcctggtccatagaccagccctgagggtggtgatcctgactgtgtcc
tccatgacagacaggctcctggcccactacggtagtaacgtccctgtggtcagtctggaa
gccctctgtccagctgaggtggtctacagtaactgtagtagtaaagactacttctactct
gctctgagactggtactggagatccaccgcaccaaggaggagggagatgtggtgctgttc
ttggcctcagctcaggaggttgtctgtgcccgtgctatcctccagagagagggaaccaga
ctgggggcagaccttggggagctggtgcccgtggtcttgtgccctgggcgtggtcggaca
ccctctctcctgggggaggggatggggagtaggggaaccgttacgaccagttgccggagg
gttttcctctccacaagccagggagaggacatgttctgggctgtggactctgttaacttt
gtcatcgacgtaggactggagaaaagacatgtgtatcatcccaggttaagggccacctct
gaagtactacgatccatcagcagataccaggctgatgtcaggaagcagctgattggaccg
acagggaagtgtttctgcctgtaccctaaggaaagagtactccccatagagacatcccct
cagatcctggacgccaacctcaccttcaccatcctcttcctcaagaggatggagatcgca
gggctgagacactgtgacttcatcaccagaccagatccagagggtctgatgcagtcgcta
gaggagctggattacctcgcggcattggacgacgatgggaacctatcagagatcgggatc
ataatgtctgagttgccattggatgctcagatggccaaggctctgctggcgtcctgtgag
tttgattgtgtgaatgaggtggtgaccatcgcagctatgctatcagcgccaagctgcttc
ctggagccacctgttggcaggacccaagaggtacaacagtgtcacagaaagttctggcac
cctgagggagaccacttcaccctcatcaacatctacaacgccttcaagtacagccagaga
gagacatacttcagcgtagagaagtggtgtcaggactaccatctgaaccaccgcgccctt
cagacggcagacaccatcaggtcagagttgactgacatcctgaagagaatagagctgccc
atctccgagacgtccttcggaaccaagaccaacacactcaacatcaagagagctctgctg
gcagggttcttcatgcagattgcccgcgatgtggatggttcaggaaactacttcatgtta
accaacagacacatggctcaggtccaccctgcctccagctatggggccaaggcacatcaa
ttgggttttccagagtgggtgctgttccatgagtatactctctcgggaaaccacggtatc
cggacagtctctgacatctcccctgcagtgttcatccagacggcccctcagtatttctat
tacaacctgcctcctagtgagagtaaagacctactacagcacattctggaccgggatgga
tctggacgtaaagacaagcaacagaccctgacaatcaacagtaaagcggatacggactgc
agtacagtggctcagtcttatgacagatgtgtgctacagtga
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