Oncorhynchus gorbuscha (pink salmon): 124022501
Help
Entry
124022501 CDS
T07892
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124022501 (apex2)
Enzymes [BR:
ogo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
124022501 (apex2)
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
124022501 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
124022501
NCBI-ProteinID:
XP_046193360
LinkDB
All DBs
Position
LG03:86225960..86229137
Genome browser
AA seq
594 aa
AA seq
DB search
MKIVSWNINGIRTFKGGIKNALESLDADIVCVQETKVTRDLLDERTAIVEGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTTNHEGTIGCYGDSSEFSSEELQLLDNEGRA
VLTQHRVMCEETPETVTVINVYCPRADPEKPERKHFKLQFYKLLQYRAEAILEAGSRVII
LGDVNTSHRPIDHCDPDYIEDFEDHPGRKWLNGLLVDDSEGKEYEKNIEESENTSSKPLR
SGKFVDTFRHFHPTRSKAFTCWNTMTGARQTNYGTRIDYIFADHPLVKMGFVAADIMPEV
EGSDHCPVWGKLCCPLLSSAKLPPLCTRNLPEFAGRQQKLSRFLVKMDQQQPAREACRDP
LPGSQETGETRENLNPLGSAGTTSTGMKRKLAVESCVPKSKKIMTLKAATPKPQGNLLAF
FKPKSIPVAPTREDPVSQCERGEERNEVTPSQPHTFKGGHSAGQDVSSIPGTPCTEYPQG
VCMGDKVHVPGSNIQDASVNSQNQEKDAALASEAIVDPPCPRKGASLGGFWKTVLRGPPP
PPPCKVHGEPCVLRTVKKAGPNMGKQFFVCNRPQGHASNPEARCNYFSWVDKGK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcagttggaacattaatggcataagaactttcaagggcggaattaaaaat
gcgcttgagtcgctggatgctgacatcgtatgtgtccaagagacaaaagtaacaagagac
ctgctggatgagaggactgctattgttgaaggttataactcatatttcagcttcagtcgt
ggacgcagtggctactcaggagttgctacttactgcaaagacagtgccaccccatttgct
gcagaagagggcttgaccggtctgctgaccaccaaccacgaggggaccattggatgttat
ggtgactcgagtgagttctccagtgaggagctgcagctcctggacaatgagggaagggct
gttctcacacagcacagagtcatgtgtgaagagacacctgaaacagtcacggttatcaat
gtatactgcccacgagctgacccagaaaagcctgaacgtaaacatttcaaactgcagttc
tacaagctgcttcaatatcgggctgaagcaattttagaagctgggagccgtgtaatcatc
ttgggagatgtgaatacatctcaccggcccatagatcactgtgacccagattacatagag
gattttgaggatcaccccgggaggaaatggctaaatggtttactggttgatgacagtgaa
gggaaggagtatgaaaaaaacattgaggagtctgagaatacgtcatcaaaacccctccgc
agcggcaagtttgtggacaccttccgccattttcacccaacacgctccaaggccttcacc
tgttggaacactatgactggagccagacagaccaactatggcacacgtatcgactacatc
ttcgcagaccatcccttggttaaaatggggtttgtggcagcagacatcatgccagaggtg
gaggggtctgatcactgccctgtctgggggaaactgtgctgccccctcctgtccagcgcc
aagctgcctcccctctgtacccgcaacctaccagagttcgctggcaggcagcagaaactc
tcacgcttcctcgtcaagatggaccaacaacaacctgccagagaggcttgcagggaccca
ctaccaggatctcaggagactggggagacccgagagaacctgaatccactgggatcagca
gggaccacctccactggaatgaaacggaagttggcagtggaatcttgtgtcccaaagagc
aaaaagattatgacactgaaggctgctaccccaaagccccagggcaacctcctagccttt
ttcaagcccaaatccatacctgtggccccaaccagggaagaccctgtgagtcagtgtgag
aggggagaagagagaaatgaagtgaccccatcacaaccacataccttcaagggaggacat
tctgcaggacaagatgtttcatcaattccaggcacgccgtgcacagaatatccccagggt
gtctgtatgggagacaaagtccatgtaccgggcagcaacatacaggatgccagtgtcaat
agtcaaaaccaggagaaggatgcagctctggcttctgaggctattgtagaccccccatgt
cccaggaagggggcttcactgggtgggttctggaagacggtcctgcgtgggccacctcca
ccgcccccctgtaaggttcatggggaaccctgtgtactccgcacagtcaagaaggcaggt
ccaaacatgggcaagcagttctttgtgtgtaaccgccctcagggtcatgcatccaatccc
gaggctcgctgtaactacttttcttgggtggataaaggaaaatag
DBGET
integrated database retrieval system
