Oncorhynchus gorbuscha (pink salmon): 124022855
Help
Entry
124022855 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124022855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124022855
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124022855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_14
ARM_TT21_N
ANAPC3
TPR_8
ARM_TT21
TPR_7
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
124022855
NCBI-ProteinID:
XP_046193498
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MADNNTDQEKAIAANALEAFTAGNYEESLKHLGKLQELNKEDYKIALNKAIAEFYKSGQT
TTCTLKQTLIAMKNQVHTSMEDIDGLDDVENSLLYYNQAIIHYHMRQYSEAIAIGERLYH
FLEPFEEKFALAVCFLLVDLYLLTYQPEKALHLLAVLEKLSVQGNNKNGKGEVIFQTQCK
FYIHRDPVVEAADLIQDNLRELTGGQSVNKDGRNQKAEFIDMIEAAKSKMHQYKVRAYIQ
MKSSKACKREIKSVMNTAGNSASSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGAIKTG
ECVRCMFWNNLGCIHFAMGKHNLGIFYFKKALQENDHTCAQLGDGGATGNGQSKQFSGIP
MCALLANKRYELLYNCGIQLLHIGRPLAAFDCLMDAVQVYHSNPGLWLRLAECCIAANKG
SLEQDNKGLPSKKGIVQAIVGQGYHRKIILASQSTQNTIYSDGQSAAIPVASMEFAAICL
RNGLVLLPDHQQQENKAENGSKTTSQSGSTESGSENSDACSGKGQEGDKFLSAAPSSPLR
KQEVENLRCSLLACSAYVALVLGDNLMALNHADQKLLHQTKLSGSLKFLGHLYAAEALIS
LDRISEAIGHLNPENVTDVSMGVLSSEQDQGPDKGDLEPVESSGKQTPLCYPSTVSSARA
IMLFNLGSAYCLRSEYEKARKCLHQAASMVNTKEIPPEAILLAVYLELQNGNTQLALQII
KRNQLLPSVLQAPSPDTRKKPVPSSFQPVQPPIQMPSPFTTVQRK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcagataacaacacagaccaagaaaaagcaatagctgcaaatgcgttggaggcgttt
acggctggaaactatgaggaatctttgaaacaccttgggaagttgcaagagttgaacaag
gaggactacaagattgctttgaataaagcaatagctgaattctacaagagcggccaaacc
accacatgcaccctgaagcagactcttattgcaatgaaaaaccaggttcacacttcaatg
gaggatattgatggtttggatgatgtagaaaacagtcttctctactacaatcaagctatc
attcactaccacatgagacagtactctgaagctattgctattggagagaggctgtaccat
tttctggagccgtttgaagagaagtttgctctggcggtctgcttcttgctggtggatctg
tacctgctaacgtaccagccagagaaggccctccatctccttgctgtgctggagaaactg
tctgtacagggaaataacaagaacggcaaaggggaggtaatatttcagacacagtgcaag
ttctacattcacagggacccggtagtggaggcagcagacctcattcaggataatctcagg
gagcttactggaggacagagtgtcaacaaagatggtcggaaccagaaggcagagttcatt
gacatgatcgaagcggctaaatccaaaatgcaccagtacaaagtgcgagcgtacattcag
atgaagtcatcaaaggcctgcaaaagggagatcaagtctgtgatgaacacagcagggaat
tctgcttcctcactcttcctcaagagtaactttgagtacctgagaggaaactaccgcaaa
gcagtgaagctcttaaacagctccaacatcgcagagcaccctggggccatcaaaacaggt
gaatgtgtgcgctgtatgttctggaacaatctgggttgcatacactttgccatggggaaa
cacaacctaggtatattctacttcaaaaaggccctgcaggagaacgaccacacgtgtgca
cagctgggggacggtggggcgacggggaacgggcaatctaagcagttctcgggcatcccc
atgtgtgcactgctagccaacaagcgttatgagctgctgtataactgtgggatccagctg
ctgcacatcggccggcccctggcggctttcgactgtctgatggatgctgtgcaggtgtac
cactctaaccctggcctctggttacggttggcagagtgctgcattgctgccaacaagggt
agcttagaacaagacaacaagggtcttccgagtaaaaagggcattgttcaggccatcgtt
gggcagggctaccatcgcaagatcatcctggcatcacagtccacccagaacacaatctac
agtgatgggcagtctgcagccattccggtggccagtatggagtttgcagcgatctgtctg
aggaacggcctggtcctcctccctgatcaccagcagcaggagaacaaggcagagaacggc
tccaagacaaccagccagtcaggcagcacagagagcggctcagagaacagcgacgcctgc
agtgggaagggtcaagaaggagacaagttcctttctgcagcaccgtcttcacctctgagg
aaacaggaggttgaaaacctcaggtgttccctcctggcctgcagtgcctatgtggccctg
gtgttaggagacaacctgatggccctgaaccatgcagaccagaagctccttcaccagacc
aagctgtctggatcactcaagttcctgggacacctgtatgctgcagaggccctcatatcc
ctggaccggatctcagaggccatcggtcacctcaacccagagaatgtcactgatgtctcc
atgggggtgttgtccagcgagcaggaccaagggccagataaaggggatctggagcctgtc
gagtcatcagggaagcagactcctctgtgttaccccagcacagtgagctcagcccgggcc
ataatgctgttcaacctgggcagtgcctattgtctgaggagtgagtacgagaaggcccgc
aagtgcctgcatcaggccgcctccatggtgaacaccaaggagattcctcctgaagccatc
ttactggctgtctacctggagctgcagaacgggaacacacagctcgccctacagatcatc
aaacgtaaccagctcctcccctcagtgctccaggcgccctctccagacacacgaaagaag
cctgttccctcctccttccagcctgtccaaccacccatccagatgccctcacccttcaca
acagtccagcgcaaatga
DBGET
integrated database retrieval system
