Oncorhynchus gorbuscha (pink salmon): 124023295
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Entry
124023295 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124023295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124023295
03036 Chromosome and associated proteins [BR:
ogo03036
]
124023295
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124023295
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124023295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
4HB_MCP_1
Motif
Other DBs
NCBI-GeneID:
124023295
NCBI-ProteinID:
XP_046193756
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MEEVDVEPTTTPIPGFDSNQKHLGFVWGPGDILVYETIYKASGGSAGGCPFVHEVRKDED
IYSPILRKLFNESHHIFVGLQRIREDLPSKNKKPQFVSISKNYRSVIRACMEELQQVAVS
TQDAALATQYGNQVSILLAVELIWNLCEVLFIDAAPAGSLVLHLLDWVRLHKADVDEKAR
EVLASESPAEHQAYWDVVISYVLQGRMDEARQVLVKQAALQPAARVMFKLLDNLLMKMPI
FNPGETQTLTEFDVKWRHWREEVDHCLQDQSFASNRHLEDICKILVGDEDVLLEYKELLS
TWYHFLVTRLLFSHPTVKPTELHYYAQSSMHMFLDTRSVPEPLDSILLAAFEFDIHQVIK
DCSIALNNWWFVGHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVD
YFDHCPEFGRVYLELQIERVPLDTERKALKVIRICEQRQMTEQVRSICKIMAKKALRNNR
LGSALSWSIRAKDAAFATLISERFLQDYCAKGTFSDLDLIDNLGPAMLLSDRLTFLGKYR
EFHRLYGEKRFSDAAKLLLSLMTAKIAPHSFWMTLLTDALPLLEQKEVIFSADQTHELMF
CLEELTSGKSVPTPDRPMQDEDIETTKIELLRLALARNLAMAIVKEGTVEV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtagatgtggagccaacaactactcctatccctgggttcgacagcaaccaa
aaacacttgggatttgtgtggggtcctggagatatcctggtttatgagaccatttacaaa
gcatcaggtggatctgcagggggttgtccctttgtccacgaggtcaggaaagatgaggac
atctattccccgattttgcgtaaactcttcaatgagtcccatcacatctttgttggtctg
cagaggatcagagaggatctgcccagcaagaacaagaaaccccagtttgtcagtattagc
aagaactacaggtctgtgattcgagcatgcatggaggaactccagcaagtcgcagtttct
acacaagatgcagcattggctacacagtatggaaatcaggtgtcaatcctgctggcagta
gagctgatctggaatctttgtgaagtgttgttcatcgatgcagctccagctggctccctg
gtgctccacctgctcgactgggtgaggctgcacaaggctgacgtggatgagaaggccagg
gaggtgctggcgagtgagagccccgcagagcaccaggcctactgggacgtggtgatcagc
tacgtgctgcagggccggatggacgaggccaggcaggttctggtgaaacaggcagctttg
cagcctgcagccagggtcatgttcaagctgctggacaacttgctcatgaagatgcccatc
ttcaatcctggtgagactcagaccctgacagagtttgatgtaaagtggagacactggcgc
gaggaggtggaccactgtctccaggaccagtcctttgccagcaaccgccacctggaggac
atctgtaagatcctggttggtgatgaggatgttctcctggagtacaaggagctgctgagt
acctggtatcacttcctggtcaccagactgctgttctcccaccccactgtcaagcccaca
gagctgcactactacgcacagtctagcatgcacatgttcctggacacgaggagtgtccca
gagcccctggacagcatcctgctggcagcctttgagtttgacatccaccaggtcatcaaa
gactgcagcattgctctcaacaactggtggtttgtggggcatctgactgacctactggac
cactgtaaactgctccagtctcacaacctacattttggctccaacctgagagagtttcta
ctgctggagtacgcctcaggactcttcacccatcacagcctgtggcagctggctgtggac
tactttgaccactgtccagagtttggccgtgtgtacctggagctacagatagagcgtgtt
cctctggacacggagcgcaaggccctgaaggtgatcaggatctgtgagcagaggcagatg
actgaacaagtgaggagcatctgtaagatcatggccaagaaggccctgaggaacaacaga
ctgggctctgctctctcctggagcatcagagccaaagatgctgccttcgccaccctcata
tcagagaggtttctccaggactactgtgccaaagggaccttctctgatctggacctgatt
gacaacctgggtccagccatgctgctcagtgacaggcttacttttctagggaagtaccgt
gagttccatcggctgtacggcgagaagcgtttctcggatgccgccaagctcctcctctcc
ctgatgacggccaagatcgccccacattccttctggatgactctgctgaccgacgccctg
cccctgctggagcagaaagaggtgatcttctctgctgatcaaactcatgagctgatgttc
tgtctggaggagctgacctcagggaagagtgttcccaccccagacagacccatgcaggat
gaggacatcgagacgacaaagattgagctcctgcggctagcgctagctcgtaacctggcc
atggccatagttaaggaggggacagtggaagtttga
DBGET
integrated database retrieval system
