Oncorhynchus gorbuscha (pink salmon): 124023896
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Entry
124023896 CDS
T07892
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04136
Autophagy - other
ogo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124023896
04136 Autophagy - other
124023896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124023896
03029 Mitochondrial biogenesis [BR:
ogo03029
]
124023896
Membrane trafficking [BR:
ogo04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
124023896
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124023896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
ANAPC4_WD40
Beta-prop_HPS5
WDR55
Beta-prop_NWD2_C
Beta-prop_EML
Beta-prop_IFT140_1st
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
EIF3I
RMC1_N
Motif
Other DBs
NCBI-GeneID:
124023896
NCBI-ProteinID:
XP_046194014
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
METGEGADGPSGPGEPGAGPGTELTGLGCASFNQDSTSLAVGTKTGYKLFSVTSVDKLDC
IYESETPDVYIVERLFSSSLVVVVSLSIPRRMNVYHFKKGTEICNYSYSNNILSVRLNRQ
RLVVCLEESVYIHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSYLAYPGSSTIGEIIVY
DANNLSTLTMIPAHDSPLAALTFNSSGTKLASASERGTVIRVFSIPEGQRLFEFRRGMKR
YVNISSLSFSPDAQFLCASSNTETVHIFKLEQHGPSGEEECPTWGSYVGKMFSAASSYLP
AQVSGVMSQERAFATVRLLVAGQRNVCTLAMIQKLPRLLVASSDGQLFIYNVDPQDGGEC
FLAQKHRLFGEDEDKEEGLESEGSEVTVPVQACPSYAATVAIPATGPVTTTLTGYSEDGG
AKKGEVIPEHEFAAGPVCLDDENEFPPINWCRDGTRGGQGRRL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagacgggagagggagctgacggtcctagcggacccggtgaaccgggagccgggccg
gggacggagctgacggggcttggctgcgcctctttcaaccaagactccacgtcattggca
gtgggaaccaagacaggctataagctgttctctgtgacctcagtggacaaactggactgc
atctacgagagcgagaccccagacgtgtacatcgtggagcggttgttctccagcagtctg
gtggtggtggtcagtctctccatccccagacggatgaacgtctaccactttaagaaggga
acggagatctgcaactacagctacagtaacaacatcctctctgtcagactcaacagacag
aggctggtggtgtgtctggaggagtcagtgtacatccacaacatcaaagacatgaagctg
ctgaagacccttctcaacacgccctccaacccctcaggtctgtgtgctctgtccatcaac
cattccaactcgtacctggcctacccaggcagctccaccatcggagagatcatagtttac
gatgccaacaacctgagcactctcacaatgatcccggcccatgacagtcccctggctgct
ctcacctttaactcgtcaggcaccaagctggccagcgcctcggagaggggtactgtaatc
cgtgtgttctccatcccagagggacagcgtctgtttgagttccgcagagggatgaagagg
tacgtcaatatcagttccctgtccttcagtcctgacgcccagttcctctgtgcctccagc
aacactgagaccgtgcacatcttcaaactggaacagcacggacccagtggagaggaggag
tgtcctacctggggatcctacgtagggaagatgttctctgcagccagcagctacctccca
gcccaggtgtctggcgtgatgagtcaggaaagagccttcgccactgtacgcctcctagtg
gccgggcagaggaacgtctgtaccctcgccatgatccagaagcttcctcgtctgctggtg
gcctcctccgacggacagctgttcatctataacgtcgacccccaggatggaggagagtgc
ttcctggctcagaaacacagattgtttggtgaggatgaggacaaggaggaagggttggag
tcagaagggtcagaggtcacggtgcccgtccaggcatgtccatcatacgccgccactgtt
gccataccagccaccggtccagtcactaccacactcacaggttactctgaggatggtggg
gctaagaagggcgaggtgatcccagaacatgagtttgctgctggtcccgtctgtctggat
gatgagaatgagtttcctccaataaattggtgccgcgacggaactcgaggtggccagggg
cgtcgtctgtga
DBGET
integrated database retrieval system
