Oncorhynchus gorbuscha (pink salmon): 124024369
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Entry
124024369 CDS
T07892
Name
(RefSeq) contactin-1a-like
KO
K06759
contactin 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514
Cell adhesion molecule (CAM) interaction
ogo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124024369
04517 IgSF CAM signaling
124024369
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124024369
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ogo00537
]
124024369
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
Contactins
124024369
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ogo00537
]
Others
124024369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_PDGFR_d4
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
124024369
NCBI-ProteinID:
XP_046194262
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MAVTALVLLVLSSSLSHTEAVLFGEPRIFGDDATGYGPIFEEEPLDIVYTKESPDRLISM
NCRARANPAPTYRWRRDNWEIKLLELPNEHYSLVGGNLIINNPEEKKHAGTYVCVAKNVY
GTVISKEAKVKFGYLEEFPDEERDPVTVKEGQGAVLLCAPPKRWPTEVTFRWIYNEFPVF
LHPDKRRFVSQSTGNLYISKVEASDAGNYSCYVFNPQIGKGVYSKFIPLISTEETPEKRY
KADLVVKFPDTTAMLNYNVTLECFALGNPAPHIVWRKIGATDLPASAQVSMSGALLHLYN
VQYEDSAGYECEAINQKWQDWHQAWLYVEAAPEWAVTINNTQKDVGSEHTMSCVANGKPG
PYIRWLKDGYSYGKGELKFSSLTFEDSGMYQCIAENYWGIIYASAELRVIACAPTFELNP
VKKYLLGANNGRVVIECKPRAAPRPRFTWTKGKEVLFNNSRISIMFDGSLEILNATRNDE
GVYTCLAQNDRGKANSTGTLTITEATQITVAPEDTQVMVGEEVHLQCQASFDPSLDITFI
WSLDFRVIDFYLEWKHYERIMDREDSGELKIMNVQLRHEGRYTCTAQTVVDNVTASADLK
VKGLPAPPGGVRVEEIRDTSVKLVWNRGADHGSLILGYTIQTRDVYALTEVDWRDASTSP
TALDGMSVMADVVDLYPWMEYEFRVYATNEFGDGEASIPSMKIKTWDLIITWTPVQPQYF
YGKKFGYVVAFKPHDDVDWLYETISDPETHANMVKSNDFQVREFQVKVKTFNSKGDGPYS
LSTTIYLPPLVPSESPTDVYSRPVSSHEALVWWIPVMDTGTGLQQYIDGYQVKYWRKYDD
TEPGANRIFVPASMNQTRLENMLPDSHYLIEVRAYNGAGVGPPSEHCEMFTKRAPPSVAP
QMWRYISYSGKWLYVWWHHISYDWFGNESFPLYYKVMFRKTGYITGPIYMTGWHFIDFPM
PQVGDYELEVRGRYEGGDGPIRKIRLQGKASFLRPTLSLAAMLLLALCIVGLGI
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcacagccctggtcctgctagttctctcctcctcactgtcacacactgaggcc
gtcttgtttggtgagcccaggatctttggagatgacgctactggctacggtccaatattt
gaagaggagcctctggatatcgtctacacaaaggagtcccctgacagacttatctccatg
aactgtagagcacgggccaaccctgcacccacataccgatggaggcgtgataactgggag
atcaagctgctggagctgcccaatgaacactacagtctggtgggagggaacctcatcatt
aacaaccctgaagagaagaaacatgcagggacctacgtctgtgtcgccaagaacgtgtac
ggcaccgtcatcagcaaggaggccaaggtcaagtttggatacctggaggagttcccagat
gaagagagagaccctgtgaccgtgaaggagggccagggggccgtgctgctctgtgctcct
cccaagcgatggccaactgaggtgacgttccgttggatatacaacgagtttccggtcttc
ctccacccggataagcgtcgcttcgtctctcagagcaccgggaatctgtacatctccaag
gtggaggcgtcagacgcagggaactactcctgctatgtgttcaacccacagattggcaag
ggagtctactccaagtttatccctctcatatctacagaagagaccccagagaagagatac
aaggccgacctcgtagtgaagttccccgacaccacagctatgctcaactacaacgtcaca
ctggagtgcttcgctctgggaaatccggcccctcatatcgtctggaggaagataggtgct
actgacctgcctgccagcgctcaggtcagcatgtctggagcgctgctccacctctacaac
gtccagtatgaagactcagcagggtacgagtgtgaggccatcaaccagaaatggcaggac
tggcatcaggcgtggctctatgtagaggctgctcctgagtgggctgtgaccatcaacaac
acccagaaggacgtagggtcagaacacaccatgtcctgtgtagctaatgggaagcctggc
ccatacatccgatggctcaaggatggatactcgtatggtaaaggtgagctgaagttctcc
agtctgacgtttgaggactctgggatgtaccagtgtatcgctgagaactactggggtatc
atctacgccagcgctgagctacgtgtcattgcttgtgccccgacgtttgagttgaaccca
gtgaagaagtatcttctaggagctaacaacggccgtgtggtcatagagtgtaagcccaga
gctgcccccagacccaggttcacctggaccaagggaaaggaagtgctcttcaacaactca
cgtatctccatcatgtttgatgggagtctggagatcctgaatgccaccaggaatgatgag
ggggtatacacctgcttagctcagaatgacagagggaaggccaacagcacagggactctg
accatcacagaggcgacacagatcacagtagccccagaggacactcaggtgatggtagga
gaggaggtgcatctgcagtgccaggcctcctttgaccccagtctggacatcaccttcatc
tggtctctggatttcagggtcatcgacttctacctagagtggaagcactatgaacgcatc
atggatcgtgaggacagtggagagctgaagataatgaatgtccagttgagacacgaggga
cgctacacctgtacagcccagactgtcgtggacaacgtcaccgcgtcagcagacctcaag
gtcaaaggccttcctgctcctcccggtggggtgagggttgaggagatcagggacacctcg
gtgaagctggtgtggaaccgaggggccgaccatggcagcctcatccttgggtacaccatc
cagaccagagacgtctacgcactaactgaagtggactggagggacgcatccacctcccct
acggccctggatggcatgtcagtgatggctgatgttgtggacttgtacccctggatggag
tatgagttcagggtctatgctactaatgagtttggagacggagaggccagcatcccttca
atgaagatcaaaacctgggatttgatcataacatggacacccgtacagccgcagtacttc
tacggtaagaagtttggctacgttgtggccttcaagcctcatgatgatgttgactggttg
tatgagaccatatcagacccagagacacacgctaacatggtcaagtcgaacgacttccag
gtcagggagttccaggtgaaggtgaagacgtttaactccaaaggagatggaccctacagc
ctgtcgaccactatctacctccccccactagtcccctctgagtctcctacagatgtatac
tccaggcctgtctcgtcccatgaagctctggtctggtggataccagtcatggacactggt
accggccttcagcagtacatagatggataccaggtgaagtactggaggaagtatgacgat
acagagccgggggccaatcgtatctttgtgcccgcctccatgaaccagaccaggctggag
aacatgctgccagactctcactacctcatcgaggttagagcctacaacggagccggtgtc
ggccctcccagcgaacactgcgagatgttcaccaagagagcacctccaagtgtggctccc
caaatgtggcgttacatcagctactctggcaagtggctgtacgtgtggtggcaccacatc
tcctacgactggtttggcaatgagtccttcccactatattataaggtgatgttcaggaag
actggctacatcacagggccgatctacatgacgggctggcacttcattgacttccccatg
ccccaggtaggggactacgagctggaggtcagaggtcgctatgagggtggagacggcccc
atcaggaagatcaggcttcagggtaaggcatccttcctgagacccactctcagtctggcc
gccatgctactgctggccctgtgcatcgtgggattggggatatag
DBGET
integrated database retrieval system