KEGG   Oncorhynchus gorbuscha (pink salmon): 124024369
Entry
124024369         CDS       T07892                                 
Name
(RefSeq) contactin-1a-like
  KO
K06759  contactin 1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04514  Cell adhesion molecule (CAM) interaction
ogo04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    124024369
   04517 IgSF CAM signaling
    124024369
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ogo04515]
    124024369
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ogo00537]
    124024369
Cell adhesion molecules [BR:ogo04515]
 Immunoglobulin superfamily
  Contactins
   124024369
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ogo00537]
 Others
  124024369
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig fn3 V-set FN3_DSCAM-DSCAML_C C2-set_2 Ig_PDGFR_d4 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 124024369
NCBI-ProteinID: XP_046194262
LinkDB
Position
Unknown
AA seq 1014 aa
MAVTALVLLVLSSSLSHTEAVLFGEPRIFGDDATGYGPIFEEEPLDIVYTKESPDRLISM
NCRARANPAPTYRWRRDNWEIKLLELPNEHYSLVGGNLIINNPEEKKHAGTYVCVAKNVY
GTVISKEAKVKFGYLEEFPDEERDPVTVKEGQGAVLLCAPPKRWPTEVTFRWIYNEFPVF
LHPDKRRFVSQSTGNLYISKVEASDAGNYSCYVFNPQIGKGVYSKFIPLISTEETPEKRY
KADLVVKFPDTTAMLNYNVTLECFALGNPAPHIVWRKIGATDLPASAQVSMSGALLHLYN
VQYEDSAGYECEAINQKWQDWHQAWLYVEAAPEWAVTINNTQKDVGSEHTMSCVANGKPG
PYIRWLKDGYSYGKGELKFSSLTFEDSGMYQCIAENYWGIIYASAELRVIACAPTFELNP
VKKYLLGANNGRVVIECKPRAAPRPRFTWTKGKEVLFNNSRISIMFDGSLEILNATRNDE
GVYTCLAQNDRGKANSTGTLTITEATQITVAPEDTQVMVGEEVHLQCQASFDPSLDITFI
WSLDFRVIDFYLEWKHYERIMDREDSGELKIMNVQLRHEGRYTCTAQTVVDNVTASADLK
VKGLPAPPGGVRVEEIRDTSVKLVWNRGADHGSLILGYTIQTRDVYALTEVDWRDASTSP
TALDGMSVMADVVDLYPWMEYEFRVYATNEFGDGEASIPSMKIKTWDLIITWTPVQPQYF
YGKKFGYVVAFKPHDDVDWLYETISDPETHANMVKSNDFQVREFQVKVKTFNSKGDGPYS
LSTTIYLPPLVPSESPTDVYSRPVSSHEALVWWIPVMDTGTGLQQYIDGYQVKYWRKYDD
TEPGANRIFVPASMNQTRLENMLPDSHYLIEVRAYNGAGVGPPSEHCEMFTKRAPPSVAP
QMWRYISYSGKWLYVWWHHISYDWFGNESFPLYYKVMFRKTGYITGPIYMTGWHFIDFPM
PQVGDYELEVRGRYEGGDGPIRKIRLQGKASFLRPTLSLAAMLLLALCIVGLGI
NT seq 3045 nt   +upstreamnt  +downstreamnt
atggctgtcacagccctggtcctgctagttctctcctcctcactgtcacacactgaggcc
gtcttgtttggtgagcccaggatctttggagatgacgctactggctacggtccaatattt
gaagaggagcctctggatatcgtctacacaaaggagtcccctgacagacttatctccatg
aactgtagagcacgggccaaccctgcacccacataccgatggaggcgtgataactgggag
atcaagctgctggagctgcccaatgaacactacagtctggtgggagggaacctcatcatt
aacaaccctgaagagaagaaacatgcagggacctacgtctgtgtcgccaagaacgtgtac
ggcaccgtcatcagcaaggaggccaaggtcaagtttggatacctggaggagttcccagat
gaagagagagaccctgtgaccgtgaaggagggccagggggccgtgctgctctgtgctcct
cccaagcgatggccaactgaggtgacgttccgttggatatacaacgagtttccggtcttc
ctccacccggataagcgtcgcttcgtctctcagagcaccgggaatctgtacatctccaag
gtggaggcgtcagacgcagggaactactcctgctatgtgttcaacccacagattggcaag
ggagtctactccaagtttatccctctcatatctacagaagagaccccagagaagagatac
aaggccgacctcgtagtgaagttccccgacaccacagctatgctcaactacaacgtcaca
ctggagtgcttcgctctgggaaatccggcccctcatatcgtctggaggaagataggtgct
actgacctgcctgccagcgctcaggtcagcatgtctggagcgctgctccacctctacaac
gtccagtatgaagactcagcagggtacgagtgtgaggccatcaaccagaaatggcaggac
tggcatcaggcgtggctctatgtagaggctgctcctgagtgggctgtgaccatcaacaac
acccagaaggacgtagggtcagaacacaccatgtcctgtgtagctaatgggaagcctggc
ccatacatccgatggctcaaggatggatactcgtatggtaaaggtgagctgaagttctcc
agtctgacgtttgaggactctgggatgtaccagtgtatcgctgagaactactggggtatc
atctacgccagcgctgagctacgtgtcattgcttgtgccccgacgtttgagttgaaccca
gtgaagaagtatcttctaggagctaacaacggccgtgtggtcatagagtgtaagcccaga
gctgcccccagacccaggttcacctggaccaagggaaaggaagtgctcttcaacaactca
cgtatctccatcatgtttgatgggagtctggagatcctgaatgccaccaggaatgatgag
ggggtatacacctgcttagctcagaatgacagagggaaggccaacagcacagggactctg
accatcacagaggcgacacagatcacagtagccccagaggacactcaggtgatggtagga
gaggaggtgcatctgcagtgccaggcctcctttgaccccagtctggacatcaccttcatc
tggtctctggatttcagggtcatcgacttctacctagagtggaagcactatgaacgcatc
atggatcgtgaggacagtggagagctgaagataatgaatgtccagttgagacacgaggga
cgctacacctgtacagcccagactgtcgtggacaacgtcaccgcgtcagcagacctcaag
gtcaaaggccttcctgctcctcccggtggggtgagggttgaggagatcagggacacctcg
gtgaagctggtgtggaaccgaggggccgaccatggcagcctcatccttgggtacaccatc
cagaccagagacgtctacgcactaactgaagtggactggagggacgcatccacctcccct
acggccctggatggcatgtcagtgatggctgatgttgtggacttgtacccctggatggag
tatgagttcagggtctatgctactaatgagtttggagacggagaggccagcatcccttca
atgaagatcaaaacctgggatttgatcataacatggacacccgtacagccgcagtacttc
tacggtaagaagtttggctacgttgtggccttcaagcctcatgatgatgttgactggttg
tatgagaccatatcagacccagagacacacgctaacatggtcaagtcgaacgacttccag
gtcagggagttccaggtgaaggtgaagacgtttaactccaaaggagatggaccctacagc
ctgtcgaccactatctacctccccccactagtcccctctgagtctcctacagatgtatac
tccaggcctgtctcgtcccatgaagctctggtctggtggataccagtcatggacactggt
accggccttcagcagtacatagatggataccaggtgaagtactggaggaagtatgacgat
acagagccgggggccaatcgtatctttgtgcccgcctccatgaaccagaccaggctggag
aacatgctgccagactctcactacctcatcgaggttagagcctacaacggagccggtgtc
ggccctcccagcgaacactgcgagatgttcaccaagagagcacctccaagtgtggctccc
caaatgtggcgttacatcagctactctggcaagtggctgtacgtgtggtggcaccacatc
tcctacgactggtttggcaatgagtccttcccactatattataaggtgatgttcaggaag
actggctacatcacagggccgatctacatgacgggctggcacttcattgacttccccatg
ccccaggtaggggactacgagctggaggtcagaggtcgctatgagggtggagacggcccc
atcaggaagatcaggcttcagggtaaggcatccttcctgagacccactctcagtctggcc
gccatgctactgctggccctgtgcatcgtgggattggggatatag

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