Oncorhynchus gorbuscha (pink salmon): 124024527
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Entry
124024527 CDS
T07892
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04145
Phagosome
ogo04814
Motor proteins
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124024527
09142 Cell motility
04814 Motor proteins
124024527
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124024527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124024527
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124024527
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
124024527
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
124024527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Dynein_IC2
WD40
WD40_Prp19
Beta-prop_WDR5
Beta-prop_EML
Beta-prop_WDR3_1st
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
124024527
NCBI-ProteinID:
XP_046194405
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MSPSSQSVSTTSDAGSQESVDGGTVGRYRTLQWDTDPSALQLQADSELGRRMHRLGASKI
VQIDFVPKELVTYTKETQTPSAAHQSEEEEDEESSEPKASPQTDQPEEEGEAEDSKEAHP
RELTEEEREQILHSEDFLVFFERSVSVVERALAEEGDIFFDYSGRDLEDKEGDMQGGSNL
SFNRVFHDDHWSKHRVVTCLDWSPQYPELMVASYNSNEDAPHEPDGIALVWNMKFKKTTP
EYTFHCQSSVMSVGFAQFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVY
CVNVVGTQNANNLITVSTDGKMCSWSLDMLSQPQESMELVYNKSKPVAVTGMAFPAGDVN
NYVVGSEEGMVYSASRHGSKAGIAEMFEGHQGPVTGISCHNAVGTVDFSHLFITSSFDWT
VKLWSIKHNKPLYSFEDNADYVYDVSWSPVHPALFASVDGMGRLDLWNLNNDTEVPTASV
TIEGACALNRVRWASGGREVAVGDSEGRVWIYDVGELAVPHPEDWSHFARTLVEIRANRG
DGEEEGAVELPV
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtctccctcttcacaatcagtgagcaccaccagtgatgctggcagccaggagtccgta
gatggggggacagtgggaagatataggaccctgcagtgggacacggacccctctgctctc
cagctgcaggcagactctgagctggggcgcaggatgcacagacttggagcgtcaaaaata
gtacagattgactttgttcccaaagagcttgtgacctacactaaagagacccagactcct
tcagcagcacatcaatctgaagaagaagaggatgaggagagcagtgagcctaaagcttcc
cctcagactgaccagccggaggaggaaggagaggcagaggacagtaaagaggcccatccc
agagagctgacggaggaggagagggaacagattctccactcagaggacttcctggtgttc
tttgagcggtcggtctctgtggtggagcgggcgctggccgaggagggagacatcttcttc
gactacagcggccgggacctggaggacaaagaaggggacatgcaaggtggatccaatctg
tctttcaaccgtgtgttccatgacgatcactggtccaaacaccgagtagtcacctgctta
gactggtccccacagtaccctgaactgatggtggcctcttacaacagcaacgaggatgct
ccacacgagcctgatgggatagcgctggtgtggaacatgaagttcaagaagaccactcca
gagtatacatttcactgccagtcgtcagtgatgtctgtgggctttgctcagttccatcct
aacctggtggtggggggaacatactcaggacagattgtgttgtgggataatcgtagtcac
aggaggacccccgtccagaggacccccctgtctgctgcagcacacactcacccagtgtac
tgtgtcaacgtggtgggtacccagaacgccaacaacctgataacagtgtctactgatggg
aagatgtgctcctggagtctagacatgctctctcagcctcaggagagtatggagctggtc
tacaataagtccaagcccgtagcagtaacaggaatggccttccctgccggagatgttaac
aactacgtggtgggaagcgaggaagggatggtgtactctgcgtcccgccacggcagtaaa
gcaggtatagctgagatgtttgaggggcaccagggcccagtgactgggatcagctgccat
aacgctgtgggcactgtagacttctcacacctcttcatcacgtcctcctttgactggact
gtaaaactgtggtccatcaagcacaacaagccattgtactcctttgaggataatgcagac
tatgtctatgatgtcagttggtcccctgtgcatccggctctctttgcctccgtggatggg
atgggtcgtttggacctgtggaacctcaacaatgacactgaggtgcccacagcgagtgtg
acgatcgagggggcgtgtgctctgaaccgtgtgagatgggcgtcgggaggcagagaggtt
gccgtgggtgactcggagggacgtgtctggatctacgatgtgggagagctggcagtgcca
caccctgaggactggagccacttcgcccgcaccctagttgagatccgtgccaaccgcggg
gatggagaggaggagggggccgtggagctgccagtttga
DBGET
integrated database retrieval system
