Oncorhynchus gorbuscha (pink salmon): 124024960
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Entry
124024960 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent translocase ABCB1-like
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124024960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogo02000
]
124024960
Transporters [BR:
ogo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
124024960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
AAA_21
RsgA_GTPase
Rad17
AAA_5
AAA_7
AAA_29
AAA_28
AAA_25
AAA_18
Zeta_toxin
ECH_2
Motif
Other DBs
NCBI-GeneID:
124024960
NCBI-ProteinID:
XP_046194623
LinkDB
All DBs
Position
Unknown
AA seq
1341 aa
AA seq
DB search
MGRKDGDMPDSLPTIPEEVFAKGYPNLAFHEDKKPQEPMTEGQPTVDTERKPKKGFGRKK
KEPAKAVGFFQLFRYATGCEVLLMIIGLLCAALHGIALPLMCVVFGQMTDSFVQSGQQLN
LTANFPVEEISALLNSTDGCIQIPGVDIEALMTRHAYYFIGIGCAVFLLGTFQVMLFLLT
ATKQTKRIREKYFHAILHQQMSWFDTHQIGVLNVRLTDDINTINEGLGDKICVFVQFFCT
FLSGFIIGFIFGWKLTLVILAVSPLLAGSAAVWSKILATLTSKELSAYAKAGAVAEEILV
AIRTVVAFNGQKKAVERYERNLEDAKNFGIKKAITTNVSMGFTQFVIFGTYALAFWYGTK
LSVDEPENYTIGKTITVFFSVMIGAFSLGQGAPNLEAIAKARGAAYEVYNTIDQPRPIDS
SSKEGHKPDCVKGDIEFKNIHFSYPSRRDVKILQGVNLTVPRGKTIALVGASGCGKSTTI
QLLQRFYDPDSGEITLDGRDIRTLNVKWLRENMGIVSQEPVLFGTTIAENIRYGREDATD
EDIERAVREANAHDFISKLPDKLNTMVGERGAQLSGGQKQRIAIARALVKNPKILLLDEA
TSALDTQSESVVQAALDKARAGRTTIVIAHRLSTIRTADVIAGFSNGEVVEQGTHRELMA
KKGVYYSLVMQQSQGKPEEDEEDPVEEDNPPKYEDLDSVLYDSSDMDELEVGNEEGIENG
GFEKNSISSGRVEMKTTRRKSKKSKKDKKKEKKADEAPDIPFTRILALNKAEWPYMLVGT
LSSLVGGAVYPCVAIIFAKIIGVFSEVDPEVKRQKTMMFSLLFLLIGGVAFVTYFLKGYM
FGKSGELLTMRLRRQVFHAMMRQEIGWFDDNNNAVGVLTTRLATDASLVKGATGSRLGLA
TNTVCALTIAIVVAFIHSWQLTLLILACVPFLIGANFIQMRAMAGHAXKDQGALEQSGKI
STETVENFKTVVGLTREDVFFHKFMDSLERPYQNGLVKAPIYGLTFAVAQAIPYMVNAAI
FRFGSWLIAHCHTEYENVFLVFSVIIFAAMNIGESASFAPDFAKAKAAAGRILGLLDKKP
EIDIYSEEGEKPTDFAGDIEFRGIHFAYPTRQNVRVLQGLNVSVGPGQTLALVGESGCGK
STSIQLLERFYSPAEGQVLVDGLDTKTLNLSWLRSQLGLVSQEPILFDCSISENIQYGDN
SREVSQDEIEEAAKNANIHDFIMGLPEKYNTRVGDKGTQMSGGQKQRIAIARALVRQPKV
LLLDEATSALDTESEKIVQQALDAARQGRTCIVIAHRLSTIQNADQIAVIQYGQVTEQGT
HTDLMAKGGAYYALVNAQVNH
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaggatggggacatgccagactctctaccaaccatccctgaggaggtattt
gcaaaaggctaccccaacctggccttccatgaggataagaagcctcaggagccgatgaca
gaggggcagccaaccgttgacacggagcgcaagccaaagaagggcttcggaaggaagaaa
aaagaaccagccaaagcagtgggatttttccagttgttccgctacgctactggttgtgag
gtgctcctgatgataatcggcctgctatgtgctgccctccacgggattgccctgcccctt
atgtgtgttgtgtttggacagatgaccgacagctttgtacaaagtggacagcagctcaac
cttacagccaatttccctgtggaggagatcagcgctttattgaactcaactgacggatgt
attcaaattcctggagttgatatagaagctctaatgactcgacatgcctattacttcatt
gggatcggttgtgctgtgttcctgctggggacctttcaggtgatgttgttcttgttgaca
gccaccaaacagaccaaacggatccgggagaaatacttccatgccatcctccaccaacag
atgtcctggtttgatacacaccagataggagttctcaacgtcaggttaacagatgacatc
aacacaatcaacgaaggccttggagataagatctgtgtgttcgtgcaattcttctgcacc
ttcttgtcagggttcatcattggtttcatcttcggctggaagctaaccctcgtcatcctg
gccgtcagtcctctcctggcaggatcagctgccgtctggtccaaaatacttgccaccctg
accagtaaggagctgtctgcctatgccaaagcaggggcggtagctgaagagatactggtg
gctatcaggacagttgtggctttcaatggacagaagaaagctgtggaaaggtatgaaaga
aacttggaggatgctaaaaactttggaataaagaaagccatcaccactaacgtgtccatg
ggcttcacccagtttgtcatatttgggacgtacgccttggctttctggtacgggaccaag
ctctctgtagacgagcctgaaaactacaccattggaaaaaccattacagtcttcttctcg
gtgatgattggggcgttctctttgggccagggtgcgcctaacttggaagccatcgccaaa
gcccggggtgctgcctatgaagtctacaataccattgaccagccacggcccatagacagc
agttcaaaggaaggtcacaaaccagactgtgtgaaaggagacattgaattcaagaacatc
cacttcagctacccctccaggagagatgtcaaaattcttcaaggagtgaatctgacagtg
cctcgtgggaagaccatagctctggttggagccagtggatgtgggaagagcaccaccatt
cagctactgcagcgcttttatgatcccgactcaggagagattaccctggatggtcgggac
atccggaccctgaatgtgaagtggctgagggagaatatgggtatcgtcagtcaggaacct
gtgctattcggaacaaccattgcagaaaacatccgctatggcagagaggatgccacagat
gaggacatcgaacgggccgtgagggaggccaacgcgcacgacttcatctccaaactcccc
gataagctgaacaccatggtgggggagcgaggagcccagctcagtggaggacagaagcag
aggatagctatcgcccgggccctggtcaaaaaccccaagatcctcctgctggacgaggcc
acctccgccctggacacccagagtgagtcggtcgttcaggccgctctggataaggccaga
gcgggccgcaccacaatagtgatcgcccaccgcctgtccaccatcagaacagctgacgtg
atcgctggcttcagcaacggagaggtggtggagcagggaacacacagggaactcatggcc
aagaagggggtttactactctctggtcatgcagcagagtcaagggaagccagaagaagat
gaagaggaccctgtggaagaggataaccctcctaaatatgaggatctggattctgtccta
tatgactcatctgatatggatgagctggaagtgggaaacgaggaaggaatagaaaacggc
ggctttgaaaagaactcaatcagcagtggccgtgtggaaatgaagacaaccaggaggaaa
tctaagaagtccaagaaggacaagaagaaggaaaagaaagcagatgaagctccagacatc
cccttcaccagaatcctggccttgaacaaggccgagtggccgtacatgttggtaggaacc
ctgtctagcttggtggggggagccgtttatccctgtgtcgccatcatcttcgccaagatc
attggagtgttttccgaggttgacccggaagtcaaacgacagaaaaccatgatgttttcc
ctgctctttcttctcatcggaggagtggcttttgtcacctacttcctaaagggttacatg
tttggaaaatcaggagagcttcttaccatgaggctgaggaggcaggtattccatgccatg
atgagacaggagattggatggtttgatgacaacaacaatgcagtgggagttctaaccacc
agattggccaccgatgcatctctggttaaaggggcgactgggtctaggttgggtctggcc
accaacacagtctgtgctctcaccatcgccattgtggtggccttcatccacagctggcag
ctcaccctcctcatcctcgcctgtgtgcccttcctcattggagccaacttcattcagatg
agggccatggcaggccacgccntcaaagaccagggtgccctggagcagtctgggaagata
tctacagagaccgttgaaaacttcaagacagttgttggattgacacgggaggacgtcttc
tttcacaagttcatggacagtctagaaagaccataccagaacggtttggtgaaggctccc
atctacggactaacatttgccgttgcccaagcaatcccttacatggtcaatgctgcaatc
ttccgctttgggtcctggcttattgctcactgtcacacagaatatgaaaatgttttcctt
gtgttttctgtgatcatatttgctgccatgaacataggagaatcagcatcttttgctcct
gactttgccaaagcgaaagcagctgcaggaagaattcttggcttgttggataagaaacca
gagattgacatttacagtgaggagggagagaagccaacagactttgccggggacattgag
ttccgagggatccactttgcatacccgacccgtcagaacgtgagggttctccaggggttg
aacgtgtcagtggggcctggtcagaccctggccctggtcggggagagtggctgtggtaaa
agcacctccatacaactactggagcgcttctatagccctgctgaaggacaagtgttagtg
gatgggttggatactaagaccctgaacctgtcgtggctgaggtctcagctgggcctggtg
tcccaggagcccatcctgttcgactgcagcatctcagagaacatccagtacggggacaac
agcagagaggtctcccaggatgagatagaggaggcagccaagaacgccaacatccatgac
ttcatcatgggcctgccagagaaatacaataccagggttggggacaaggggacccagatg
tctggaggtcagaaacagaggatagccatcgccagagcactggtcaggcagcctaaagta
ctgctgctggatgaagccacttccgccctggacacagagagtgagaagattgtccaacag
gcattagatgccgcccggcagggccgcacctgcatcgtgatcgcccatcgcctgtctacc
atccagaacgcagaccagatagcggtaattcagtatggtcaggtgacagagcagggtaca
catactgacctcatggctaaagggggggcttactatgccctggtcaacgcccaggtcaac
cactaa
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