Oncorhynchus gorbuscha (pink salmon): 124025099
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Entry
124025099 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II transactivator-like
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ogo01001
]
124025099
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ogo04054
]
124025099
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
124025099
Protein kinases [BR:
ogo01001
]
Serine/threonine kinases: Other
TAF1 family
124025099
Pattern recognition receptors [BR:
ogo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
124025099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
nSTAND_NTPase5
VapE-like_dom
RsgA_GTPase
nSTAND3
AAA_16
ABC_tran
AAA_22
DUF815
Motif
Other DBs
NCBI-GeneID:
124025099
NCBI-ProteinID:
XP_046194721
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MRLVQRQILIGSGKNTSKCLEKDLVFESSPGAKPKRSIVLLGNAGMGKSTLIKKLCVDWS
DGLLPQFDFVFLLDGKALTLPPEPTYSLRSLLLHLSCPHPRDVFSQVLSVPERVLVIFDG
FEVVRDLEGLLQSPADDSEGENYSVRQLFSGLLQRKLLPGCSLLLSARPRGTVSGLLRRA
DSLLELSGFSPPDIERYLGQYFSGQSLEAPTSVPDSIPVPTSVSVPVPVPVPVSVPVPVP
VPVPVSVPVLALTRLHSQPFLLSVCWNPALCHMVCLLLEHWDVSESLPSTLTGLCYRVLL
LKMRRHTLKHTHGQTLPQTQTQAHTHTLKHTHGQTLPQTQTQAHTHTLKHSQKPTPNSNP
GKPSPQTQRIKPYPKLKPRRRMRREKHSQKNEEGEKESEEENRCVLSELSGLAWQGVKGH
SSLLTLTLDNTVCVKLRLFGLTTGLVHSHWLRGEQGRDGDNILSWAHPFLQSFLGGAHLS
VSSCVSDRALLAQILPQPRGRRRPQGECLDLAQRFAVGLLFRNNADLRDLATLDTGAMKV
VAAKRAAVILHLESLHHGDLSPARLLEACHCVYETGDVRLVRHLVRNLPEVLSFQGVPLC
PADAFVVWNLLDQCRTLRRRFCLGLEDTGLRMTGLKLLTGLSNIHSYRACIADTITLWEE
LEQSGEEELLKATVSKLTLNPFRATQVSHVQHLSTLVNIHTSRRLSESQSDGVLGEGLPA
VRDLHKLEFELGPVNGPLALPKLLELLPALHSLHHLDLENSKLGDSGAEGLAGAVLSLSS
LQIINLSQNCIGDQGIESLAPALSTIPSLHCLSLYSNVISDXGAESLAAVLPQMTSLSDL
DVKYNSFTALGAQNLASSLRDCPWIKSLGMWNVCIPYGVLERLQQQDPRIQLL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgcgattggtccagaggcagatcctgattggctcagggaagaacaccagcaagtgcctg
gagaaagatttggtgtttgagagctcccccggggcgaaacccaaacgttccatcgtgttg
ctaggcaacgccggcatgggcaaaagcacgctcatcaagaagctctgcgttgattggtcc
gacggcctcctgcctcagtttgactttgtgttcttactggacggtaaggctctgaccctc
ccccctgagccgacctacagccttcggtccctcctcctacacctctcctgcccccacccg
cgggatgtcttcagtcaggtcctctctgtcccggagcgtgtgctggtgatattcgatggc
ttcgaggtggtgcgtgacttggaggggctgcttcagtctccagcggatgacagtgaaggg
gagaactacagcgttagacagctgttctcaggtctgctccagaggaagctgctaccaggc
tgctctctgctcctctctgcccgaccacgaggcaccgtcagtgggctgctgagacgggct
gacagcctcctggaactctctggcttctcccctccggacatcgagagatacctgggacaa
tacttctctggacagtccctagaggccccaacctcagtcccagactcaatcccagtccca
acctcagtctcagtcccagtcccagtcccagtcccagtctcagtcccagtcccagtccca
gtcccagtcccagtctcagtcccagtcctagccctcaccaggctccacagccagccgttc
cttctgtctgtgtgttggaacccagctctgtgtcacatggtctgtctgcttctagaacac
tgggatgtttctgagtcactcccctccacgctgactggactgtgttacagggtgttgcta
ctaaagatgagacgacacaccctgaaacacacacacggtcaaaccctaccccaaactcaa
acccaggcacacactcacacccttaaacacacacacggtcaaaccctaccccaaactcaa
acccaggcacacactcacacccttaaacacagtcaaaaacccaccccaaactcaaaccca
ggcaaaccctcaccccaaacacagaggatcaaaccctaccccaaactcaaacccaggaga
agaatgaggagggagaaacacagtcaaaaaaacgaggagggagagaaagagagtgaggaa
gagaacaggtgcgttctgtcagagttgagcggtctggcttggcagggggttaaaggtcat
tcatctctcctgaccctgactctggacaataccgtctgtgtcaagctgcggttgtttggc
ctgacgactggactggtccattctcactggctgaggggggagcagggcagagatggtgac
aacatcctgtcctgggcccaccctttcctgcaaagcttcctgggcggggcccacctgtcc
gtctccagctgtgtgtctgaccgcgctctgctggcccagatcctaccgcagcccagaggg
aggcgacggcctcagggagagtgtctggaccttgctcagcgattcgctgtcgggctgctt
ttccggaacaatgcggacctccgggatctggccaccctggataccggcgccatgaaagtg
gtggcggccaagcgagccgctgtgatattacacctggagagccttcaccatggcgacctg
agccccgctcggctcctggaggcgtgtcactgcgtttacgagacaggcgacgtccgcttg
gtcaggcacctggtacggaaccttcccgaggttctgtcgttccaaggggttccgctgtgc
cccgccgacgccttcgtcgtgtggaaccttttggaccagtgtagaacgctgaggaggagg
ttctgtctggggctggaggacacaggactgaggatgacaggattaaaattactgacgggt
ctcagcaacatacactcatacagggcgtgtatcgctgacaccatcactctgtgggaggag
ctagagcagagtggggaggaggagcttctgaaagcgactgtgtccaagttgacccttaac
cctttcagagccacacaggtgtcccacgtccaacacctgtccacactggtcaacatacac
acaagcaggagactgtctgagagccaatcagatggtgtcctgggggagggtctaccggca
gtcagagatcttcacaagctggagtttgagttggggccagtgaatggtcctctggcgctc
cctaaactcctggagctgctgccagccctgcacagtctacatcacctggatctggagaac
agtaaactgggggacagtggggctgagggtctggctggagctgtgctgtctctctcctct
ctgcagattatcaatctgtcccagaactgtataggagaccagggaatagagagtctggct
cctgctctgtctaccatcccctcgctgcactgtctcagtctgtacagtaatgtgatatct
gacnggggtgctgagagtctggctgctgttttacctcagatgacatcactcagtgacctg
gacgtcaagtacaacagtttcacggccctgggagctcagaatctggcttccagtctgagg
gactgtccatggatcaagagtctggggatgtggaatgtgtgtattccctacggagtgtta
gagagactgcaacaacaggacccacggatacagctgctctag
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