Oncorhynchus gorbuscha (pink salmon): 124025204
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Entry
124025204 CDS
T07892
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124025204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124025204
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124025204
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
124025204
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124025204
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124025204
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PH_21
PH_11
BAR
PH_8
Arfaptin
Motif
Other DBs
NCBI-GeneID:
124025204
NCBI-ProteinID:
XP_046194779
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Position
LG03:6387761..6547073
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AA seq
870 aa
AA seq
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MTVDFEECIKDSPRFRAGINEVETDVVEIEAKLDKLVKLCSGMIEAGRAYVSANKLFVTG
IKDLSQQCKKEEMISECLEKCGESLQEIVNYNMILFDQAQRSIKQQLHTFIKEDVRKFKE
TKKQFDRVREDMEIAQVKNAQAPRNKPHEVEEATSSLTLTRKCFRHLALDYVLQINVLQA
KKKFEILDAMLSFMRAQYSLFQQGYKILDEIDPYMKKLAAELDQLVIDSAMEKRDLEHKH
ATIQQRTLMEDFSYDDNKVEFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVY
QKRLKDALTVVVEDLRLCSVKPCEDGERRFCFEVVSPTKSCMLQAESEKLRQAWIQAVQA
SIASAYREISDNYYIERLDRTASPSTSSIDSASEPRGEKWGRGGEGRGESILHRVQTLPG
NELCCDCSQATPCWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCEL
GNKVINHIYEGACEELGVKKPGPSSPRQEKEAWIKAKYVERRFLKKMSVSDSLVEGERKS
RPWSVKKCHRHNSSVRGAPKTRRKYRHDPGLISPGNLSAAAAAAKLRRDSLFCPDEMDNL
FSYFDTGNGTRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEEVECEGESEEEESSGE
VEIEQEAGSEPEEPLPPGALLYRSSRLHNLPLMAEALAHGADVHSASDEEGKTPLIQAVT
GGSLTACEFLLQNGADVNQRDMGGRGPLHHATYLGHTGQVCLFLKRGACQTEVDEEGHDP
LSMAVQAANADIVTLLRLARMNEEMREAEGPFGQPGQYPSSSPTEHQYRKCVAMGTSRKV
KRKDSVRDRVTQHITSFGSSRSWRPTSPRS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggactttgaagaatgtattaaagactctccacgattcagggctggcatcaat
gaggtggagacggatgtggtggagatcgaagctaaactagataagctggtgaagttatgt
agcggtatgatcgaggcgggcagggcgtacgtaagcgccaataaactgtttgtcaccggc
atcaaagacttgtctcagcagtgcaagaaggaagaaatgatctctgagtgtctggagaag
tgtggggagagcctgcaggagattgtcaactacaacatgatcctatttgaccaggcccag
aggtcaatcaaacagcaactccacaccttcatcaaagaggacgtgcgtaagttcaaggag
acgaagaagcagtttgaccgtgtgagggaggacatggagatagcccaggtaaagaacgcc
caggcccccaggaacaaacctcacgaggtggaggaggccacttcctctctcaccctgacc
aggaagtgcttcaggcacctggccctggactacgtactgcagatcaatgttcttcaggct
aagaagaagtttgagatccttgatgcaatgctgtcgttcatgcgagcccagtactccttg
tttcaacagggctataaaatattggatgagattgatccctacatgaagaaactagctgca
gagctggatcagttggtcatagactcagccatggagaagagagacctggaacacaaacat
gctaccatacagcagaggactctgatggaggacttctcctatgatgataataaggtggag
ttcaacgtggacgctcctaacggagtggtgatggaaggttacctgttcaagagggcctcc
aatgccttcaagacctggaacagacggtggttctccatacagaacagccagctggtctac
cagaagcgacttaaggatgccctgacggtggtggtggaggacctgaggctgtgttcagtc
aaaccttgtgaggacggagagaggaggttctgcttcgaggtggtgtcccccactaagagc
tgtatgctccaggcagagtcagagaagttacggcaggcctggatccaagctgtacaggcc
tccatcgcctctgcatacagagagatatcagacaactactatatcgagcgtctggaccgg
acagcctccccctctaccagcagtatagactcagccagcgagccccggggggagaaatgg
gggagagggggtgagggcaggggggagagcatcctccaccgggtgcagaccctcccgggt
aatgagctgtgttgtgactgctcccaggctacaccatgctgggcctccatcaacctggga
gtcctactctgcatcgagtgctctggcatacacaggagtctgggggttcattgctccaag
gttcgttcactaacactggactcctgggaaccagagctactcaagttgatgtgtgagctg
ggtaacaaggtgattaaccacatctatgagggagcctgtgaggaactgggagtgaagaaa
cctggaccttccagtcctagacaagagaaggaggcgtggatcaaggctaaatatgtggag
aggcgtttcctgaagaagatgagtgtcagtgactcattggtggaaggtgagaggaagtcc
cgcccctggagcgtgaagaagtgtcatcgccacaacagctccgtgcgaggagcgcccaaa
acccgccggaaataccgacacgaccccggtttgatttcaccaggaaacctctccgcagct
gcagcagcagcgaagctccgacgtgactctctgttttgtcctgatgagatggacaacctc
ttctcctacttcgacactggcaatggcacccgcagccctgcaggtctgagcagtgacagt
gggctgggaggcagtacagacgggagcacagacatactggtgtttggctcagtggtcgac
agtgtcaccgaggaggtagagtgtgagggtgagtcagaagaggaggagtctagcggggag
gtggagatagagcaggaggcgggatcagaacctgaggagcccctccccccgggggcgttg
ctctaccggtcgtcacggctacacaacctgccactcatggccgaggcgctggcgcacggg
gcagacgtccactctgccagcgatgaggagggaaagaccccgctcatacaggccgtgaca
gggggctctctgacagcatgtgagttcctgctgcagaatggggctgatgtgaaccagagg
gacatgggggggagaggacccctccaccacgctacctacctgggacacacaggtcaggtg
tgtctgttcctgaagagaggggcttgtcagacggaggtggatgaggaaggtcacgaccct
ctgagcatggctgtccaggccgctaacgccgatatagttacattgttgcggttagcacgg
atgaacgaggagatgcgcgaggcggagggtccgtttggtcagccaggtcaataccccagc
agctccccaactgaacatcagtacaggaaatgcgttgccatggggaccagcaggaaggta
aagcgcaaggatagtgttcgggatagagtaacacaacatatcacatctttcgggagttct
cgctcatggcgtcccaccagcccgagaagctaa
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