Oncorhynchus gorbuscha (pink salmon): 124025635
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Entry
124025635 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-9-like
KO
K16498
protocadherin delta 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
124025635
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124025635
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124025635
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124025635
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Protocadherins
124025635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
7tm_3
MAP17
DUF6377
EphA2_TM
V_ATPase_I
DUF6249
Motif
Other DBs
NCBI-GeneID:
124025635
NCBI-ProteinID:
XP_046194936
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MDLTDFYLLAALVACFWMDPSIAQELIYPIREELQENVLIGNIPKDLNVSHTNAATGASA
NLVYRLVSKAGDNPLLRVQSSTGEIFTTSNRIDRERLCPGPSFEENECSFEIEVVILPND
YFRLIKIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYQL
VNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGMPQKSSTAILQVT
VTDVNDNKPVFKENQIEVHIPENSPIGTSVVQLQATDADVGANAEIKYMFGTQVSPATKR
LFALNGTTGLITVQRPLDREETAIHKLSVLAXDGSSSPARATVIINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDFEGTKEYNFKIIASDSGKPSLNQTALVRVRLEDENDNSPIFSHPVIELAVMEN
NKRDLFLTTLSATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFT
VTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA
GENAAVTLSILSDNENFILDPYSGVIKSNVSFDREQQSSYTFDVRAVDSGRPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
TKGLFRIDPVTGNITLEEKPAISDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNA
TFIYDLIRRTMETPLDRNIGESSETYQSGDYLTIMIAIVAGAMVVIVVIFVTVLVRCRHT
SRFKAAQRKKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEENKPDDPAHEPIN
GNISLPAELEEPGHFDWNAAPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKHHM
IQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGSVHPSRQVKDFYWSIST
AYNCPVQQC
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggatctaacagacttttacttgttggctgctctcgttgcctgtttttggatggatcct
tctatagcccaggaactgatctatcctattagagaggaactgcaggaaaacgttctcatt
ggaaacataccaaaggacctgaacgtctcccatacaaacgctgctaccggagctagcgct
aacctggtctacaggctggtgtctaaagccggcgacaaccctctgctcagagtgcagagc
agcacgggagagatatttaccacctccaatcgcatcgacagggagaggctctgtcccggc
ccctcgttcgaggagaacgaatgctccttcgagatcgaggtggtgattttacccaacgac
tacttcagattgataaagattaagatcgtagtcaaggacaccaacgacaacgctcccatg
ttcccgtctcctgtcatcaacatctccatcccggagaatacgctgatcaacagtcgtttc
gccatcccctccgccaccgaccccgacaccggccccaacagtgtacacaagtaccagctg
gtgaacgggcaaagcgccttcgggttggacatcgtagagacgcccgagggggagaagtgg
ccgcagctcatcgttcagcagaacctggacagggaacagaaggacacgtacgtcatgaag
atcaaggtggaggacggcggcatgccacagaaatccagcaccgccatcctccaagtcacc
gtcacagacgttaacgataacaagccggtgttcaaggagaaccagatcgaggtccacata
ccggagaactcgcctatagggacgtccgtagtccagctacaggctacggacgcagacgtg
ggggcgaatgccgaaatcaaatacatgttcgggactcaggtctccccagctaccaagaga
ctatttgctttaaacggcaccacgggtcttataaccgtacagcgacccctcgatagagag
gagactgccatacacaagttatccgtgttagcgngtgacggcagctccagcccggccaga
gctaccgtaattataaacgtgacggacgtgaacgacaatccgccaaacatcgatctgaga
tatatcatcagtccgataaacggcaccgtgttcctctcggagaaagacccaatcaacacc
aagatagctttgatcaccgtgtcggacaaggacacggacgtcaacggcaaggtcatctgt
ttcatcgagaaggacgtcccctttcacctcaaagcggtgtacgacaaccagtatttacta
gagacgtcggcgctgctcgactttgaggggaccaaagagtacaacttcaaaatcatagcc
tccgactctggcaagccgagcttgaaccagacagcgttggtaagggtgaggctggaggat
gaaaatgacaactcgccgatcttcagccatcctgtcatcgagctggccgtcatggagaac
aacaaacgcgatctcttcctcacgactctcagcgccaccgacgaggacagcgggagaaat
gcggagatcgtctaccaactaggccctaacgcctcgttctttgacctggaccgtaaaacc
ggtgtcctcacggcctcccgggttttcgatcgcgaggaccaggatcggttcctgttcacg
gtaacggcccgagacaacgggacgcctccactccagagccaggcagcagtcatcgtgaca
gtactcgatgaaaacgacaacagccccaagttcacccacaaccacttccagttctttgtg
tcagagaacctgcccaagtacagcacggtgggggtgataactgtcacagactcagatgcc
ggggaaaatgccgccgtcacgctttcgatactcagcgacaacgagaactttatcctagac
ccgtactctggagtaataaagtccaacgtgtcctttgaccgggagcagcagagctcctac
accttcgacgtccgggcggtggatagcgggcggcccccatgttcctcggccgccaaggtg
accatcaatgtcatcgacgtaaacgacaacacccccatcgtcatctaccctccttccaac
acctccttcaaactggtccccctctcatccatccctggatcggtggtggccgaggtcttt
gctgtggacggtgacacagggatgaacgcagagctcaagtacaccatcgttagcggcaac
accaaaggtctgttccggatcgaccctgtgacaggaaacatcaccctggaggagaagcct
gctatctccgacatcggcctccatcggctggtcgtgaacattagcgacctgggctaccct
aagtccctgcacactctggtgctggtgttcctctatgtgaacgacactgtcggcaacgcc
acgtttatctacgacctcattcgccgcaccatggagacgcccctggacaggaacatcggg
gagagcagtgagacttaccagagcggagattatctcaccatcatgatcgccatcgtagcc
ggggcgatggtggtgattgtggtgatcttcgtgacagtcctggtgcgctgccgtcacacc
tcgcggttcaaggcggcccagagaaagaagcagggcgctgagtggatgtctcccaaccag
gagaacaagcagaacaagaagaagaagcgtaagaaaaggaagtcgcctaaaagctccctc
ctgaactttgtcaccatcgaggagaacaagccggacgacccggctcacgagcccatcaac
ggcaacatcagcctgcctgccgagctggaggagcctggccactttgactggaacgctgct
ccaacgaccaccttcaagccctcgagtccagacctggcacggcactacaagtccgcttct
ccgcagtccgcgttccacctcaaagcggacacgccggtctccgtgaagaaacaccacatg
attcaggagctccctctggacaacaccttcgtagggggctgtgacactctgtccaagaga
tcctccactagttcagaccacttcagtgcctcggagtgcagttcccagggaggattcaag
actaagggatccgtacacccgtccagacaggtaaaagacttttactggtctataagtact
gcgtataactgcccggtccaacagtgctga
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