Oncorhynchus gorbuscha (pink salmon): 124025668
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Entry
124025668 CDS
T07892
Name
(RefSeq) beta-1-syntrophin-like isoform X1
KO
K24064
beta-syntrophin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124025668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PDZ
PH
PH_17
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
124025668
NCBI-ProteinID:
XP_046194960
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MAVATVISRNGVQKSGFLEVLVRDRWHNVLANLNEEALTLSCEDLGENVTLNGITNGSYG
CNATHPDHTNSPKTAVRTAFTDLQEQVPEAIANRKRCVKVVKQEVGGLGISIKGGKENKM
PILISKIFKGLAADQTQALYVGDAILSVNGVNLRDATHDEAVQGLKRAGREVTLEVKYMR
EASPYVKKGSPVSEIGWETPPPESPRLGSPHCDVPVTPTMSLQGDRRQLELHSPDAKHTV
VLRCKDTASAQAWFEVMQSATSNLINKVITEVKEHTGRTGIAGSREIRHLGWLAEKTENE
KQQWKPVLVMVTEKDLLLYHSLPRMKASWHSPAHTYPLLATRLVHSGPDRGSPQPGVELS
FATRTGTRLGIEAHLFRAETCQDLSLWTRHIVTGCHSSAQMIKEVSTSCVFKGQELPILL
SCSRLCVQGPGVTPFYCPVPGCVFKGQELPHSIVLFQAVCSRARVTPFYCLVPGCVFKGQ
ELPHSIVLFQAVCSRARSYPILLSCSRLCVQGPGVTPFYCPVPGCVYKGQECRLVIHYEQ
GFSVLAEQKGEDQVDQGNQKQAKPLLCYPFERLKMSSDDGVRMLFLDFSGKEGEIQLDLH
SCPKPIVFILHSFLSAKIARLGLVA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagctacagtaatttcgaggaacggagtacaaaaaagtggatttttggaggtt
ttagtgagggaccgatggcacaatgttttggccaacttgaacgaagaagctctaacgttg
agttgcgaggacctgggagagaatgtgaccctaaacggcatcaccaatggatcttacggg
tgcaacgcaactcacccggatcacacaaacagtccgaaaactgcggtgaggacagctttc
acggatttacaggagcaagtcccagaggcgatcgcaaacagaaaaagatgtgtgaaagta
gtaaagcaggaggtaggaggactcggcatcagcataaagggagggaaagagaataaaatg
ccgatacttattagtaagatcttcaaaggtctggctgcggatcaaacccaagccttgtat
gtcggtgacgcgattctgtcggtgaacggtgtgaacctgcgggacgctacgcatgacgag
gcggtgcaggggctcaaacgagccgggagagaggtgacgctcgaagtgaagtacatgaga
gaagccagtccctatgtgaagaagggttctcctgtgtcagagataggctgggagacgccc
ccacctgagtccccgaggctgggtagcccccactgtgatgtccccgtcacccccaccatg
tccctacagggggacaggaggcagttagagctgcactctccagacgccaagcatacggtg
gtgttacggtgtaaagacacagcctcggcccaggcctggttcgaggtcatgcagtcggcg
acctctaacctcatcaacaaggtcatcacggaggtcaaagagcacacgggaagaacagga
atcgcagggagcagagagatcagacacctgggctggctggctgagaagacagagaatgag
aagcagcagtggaagccagtgctggtgatggtgacagagaaagacctgctcctctatcac
agccttccacgcatgaaggcttcctggcacagccctgcacacacatacccactgttagct
acacggctggtgcactctggtcccgaccgaggctctccccagccgggcgtggagctgtcc
ttcgccacacgtacgggaaccagactgggcatcgaggcccacctgttcagagctgagacc
tgtcaggacctttcactgtggaccaggcacatcgttacgggctgtcactcctctgcccag
atgatcaaagaagtcagtaccagctgtgtgttcaagggccaggagttacccattctattg
tcctgttccaggctgtgtgttcaagggccaggagttaccccattctattgtcctgttcca
ggctgtgtgttcaagggccaggagttaccccattctattgtcctgttccaggctgtgtgt
tcaagggccagggttaccccattctattgtcttgttccaggctgtgtgttcaagggccag
gagttaccccattctattgtcctgttccaggctgtgtgttcaagggccaggagttacccc
attctattgtcctgttccaggctgtgtgtacaagggccaggagttaccccattctattgt
cctgttccaggctgtgtgtacaagggccaggagtgcaggctggtaatccactacgagcag
ggcttctctgtcctggctgagcagaagggggaggaccaggtggaccaggggaaccagaaa
caagccaaacctctcctctgctaccccttcgaacgcctcaagatgtcctccgatgacggg
gtcaggatgctcttcctggatttcagtggaaaagagggtgaaattcagctggacctccac
tcgtgcccaaagcctatcgtcttcatcctccactcattcctctcggcaaagatcgccaga
ctcggcctggtagcataa
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