Oncorhynchus gorbuscha (pink salmon): 124025806
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Entry
124025806 CDS
T07892
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124025806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124025806
03036 Chromosome and associated proteins [BR:
ogo03036
]
124025806
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124025806
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124025806
PBAF complex
124025806
GBAF(ncBAF) complex
124025806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
124025806
NCBI-ProteinID:
XP_046195088
LinkDB
All DBs
Position
LG03:complement(11420550..11466658)
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AA seq
512 aa
AA seq
DB search
MAARGSFQSAPTGGGGGGGMGPGPQVQGGGPGMGPGTPGGRMGPSSGAQNHLYRSPMPGP
GYPRPGGMPPSSRMTPQGPPMGPPGYGSSPVSRPGMPGVMDPSRKRPAPQQVQQQRNQHT
KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLR
IFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLVIE
LDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRLAR
MLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRLHA
LLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLDNK
IHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVANPEEERRAEFYF
QPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggtagttttcaatcggctccaacgggaggaggtggtggcgggggaatg
ggacctggaccccaggtgcaaggtggaggaccaggcatgggacctggaactcctggtgga
aggatgggaccctcatcgggcgcacagaaccacctttaccgatctccgatgcctgggcct
ggatacccgagaccaggtgggatgccaccctccagccgtatgacaccccagggtccgccc
atggggcctccaggctacggctccagccccgtgtcccgaccagggatgcctggcgtcatg
gatccctcccgtaagaggcctgcccctcagcaggtccagcaacagcgcaaccaacatacc
aagaagaagaaaatggcggataagattttacctcagaggatccgggagctggtgccagag
tctcaggcctacatggacctgctggcgtttgagaggaagctggatcagaccatcatgagg
aaacgtctggacatccaggaggcactcaagagacccattaagcaaaagcgaaagcttcgt
atcttcatatccaacaccttcaaccctgccaagcccgacgcagaagacggagagggcact
gttgcgtcatgggagctgcgtgtcgaagggcgtctgcttgaagatactgctgtgtccaaa
tatgaagccaccaagcagaagagaaagttctcttccttcttcaagtctctggtcatcgag
ttggacaaggacctctatgggcctgacaatcacttggtcgagtggcacaggactgcgacc
actcaggagacagacgggttccaggtgaagaggccaggggatgtgggcgtacgctgcact
gtcctgctcatgctggactaccagccccctcagttcaagctggaccctcgcctggcccgt
atgttggggatccacacccagaccaggccggtcatcatccaggcactctggcaatatgtt
aagacccacaagctgcaggacccccacgagagagagttcatcaactgtgacaagtacctg
cagcagatctttgagacccagcgtatgaagttctctgagatcccacaacgcctacatgct
ctcctgatgcctccagaacctatcatcattaaccatgtcatcagtgtggatcccaatgac
cagaagaagacagcctgctatgacatcgatgtggaggtggacgacactttaaagacccag
atgaactccttcctcctatccaccgcaagccagcaggagatagctggcctggacaacaag
atccatgagaccatagagacgatcaaccagctgaagacccagagagagttcatgttgagc
ttcgcccgagacccccagggcttcatcaatgactggctgcaatcgcagtgcagggatctc
aagactatgactgatgtggttgcgaacccagaagaggagaggagagcagagttctacttc
caaccctgggcccaggaggccgtgtgtcgttacttctactccaaggtccagcagaggagg
caggagctggaacaagccctgggaatcagaaacacttag
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integrated database retrieval system
