Oncorhynchus gorbuscha (pink salmon): 124026226
Help
Entry
124026226 CDS
T07892
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03030
DNA replication
ogo03410
Base excision repair
ogo03420
Nucleotide excision repair
ogo03430
Mismatch repair
ogo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124026226
03410 Base excision repair
124026226
03420 Nucleotide excision repair
124026226
03430 Mismatch repair
124026226
03440 Homologous recombination
124026226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogo03032
]
124026226
03400 DNA repair and recombination proteins [BR:
ogo03400
]
124026226
Enzymes [BR:
ogo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124026226
DNA replication proteins [BR:
ogo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
124026226
DNA repair and recombination proteins [BR:
ogo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
124026226
MMR (mismatch excision repair)
DNA polymerase delta complex
124026226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-C4pol
divDNApol
Motif
Other DBs
NCBI-GeneID:
124026226
NCBI-ProteinID:
XP_046195296
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
VLLRDYKLRFSTPSASTSCKNRVLFSILSSQICSLREVKTSLELLEPEKGYYSVPIATLD
FSSLYPSIMMAHNLCYTTLLQKGSAEKLGLTPEDFIKTPTGDLFVKSSVRKGLLPDILED
LLSARKKAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTG
FGRQMIEQTKQLVESKYTIANGYQADAKVIYGDTDSVMVKLGVDTVSRAMEVGREAAEWV
SSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSSADTHDKMDCKGIETVRRDNCTLVAN
LINTCLQTILIDRDPQGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYTAKQAHVE
LAERMKKRDAGSAPQLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTQYYLEQQL
SKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSRVGGLMAFATKRSACIGCRAVLKDD
AAVCDFCKKKESELYQKEILHLSTLEERFSRLWTQCQRCQGSLHEDVLCTSRDCPIFYMR
KKVQKDLDDQEKLVSRFGW
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgctgctgagggactacaaactgcgcttctcaacgccgtcagcttccacttcctgcaag
aacagggttctgttcagcattctatcatcacagatctgcagcctgagggaggtgaagact
tcactggagctgcttgagccagagaaaggatactacagcgtccccatcgccaccctggat
ttctcctctctgtacccctccatcatgatggcccacaacctctgttacaccaccctgctt
cagaagggctcagcggagaagctgggtctgaccccagaggacttcatcaagactcccaca
ggagacctgtttgttaagagctcggtgaggaagggacttctgcctgatatcctggaggac
ctgctctctgccaggaagaaggccaaagcggagctgaaaaaggaaacggatcctttcaag
aaacaggtcctcgacggtcgacagctcgctctcaaaatcagcgccaactccgtctatggc
tttacaggggctcaggtgggcaagctgccctgccttgagatctcacagagtgttactggg
tttggcagacagatgattgagcagaccaaacagctggtggaatccaagtacaccatcgcc
aacggttaccaagccgatgccaaggtcatctacggggacacggactccgtcatggtcaaa
ctgggcgtggacactgtgagcagggccatggaggttgggagggaggcggcagagtgggtc
tcctcccacttcacccctcccatcaaactggagtttgagaaggtgtactacccctatctg
ttgatcaacaagaagcgctacgcaggcctctacttctcctccagcgccgacactcacgac
aagatggactgcaagggtatcgagacggtccgcagagacaactgtaccctggtggccaat
ctgatcaacacctgcctgcagaccattctgatagaccgagatccccagggtgcggtggcc
cacgccaaagaggtcatctctgacctgctgtgtaaccgcatcgacatcagccagctggtt
atcaccaaggagctgacccgcacagcccaggagtacactgccaagcaggcgcatgtggaa
ctggccgagaggatgaagaagagagacgcgggtagcgccccccaactgggagacagagtt
ccctatgtcatcatcaaagctgccaaaggagtagcagcatacatgaagtctgaggatcca
atctatgttctggagaacaacattcccattgacacccagtactacctggaacaacagctc
tccaagccactgctccgcatctttgagcccatcctgggagagagcaaagcagagagcgtc
ttactgaagggggatcacacgcgctgtaagacagtgttgacctccagggtgggggggctc
atggccttcgccaccaagaggagcgcctgtatcggttgcagagcagtgctgaaggacgat
gcggctgtgtgtgatttctgtaagaagaaggagtctgaactgtaccagaaagagatctta
cacttaagtactctggaggagcgcttctctcgcctgtggacacagtgtcaacgctgtcag
ggctcactccatgaggatgtgctctgtaccagccgggactgtcccatattctacatgagg
aagaaggtgcagaaagatctggatgatcaggagaagctggtgtctcgctttggatggtga
DBGET
integrated database retrieval system
